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The map label for this gene is recA [H]

Identifier: 120613271

GI number: 120613271

Start: 5163431

End: 5164495

Strand: Direct

Name: recA [H]

Synonym: Aave_4640

Alternate gene names: 120613271

Gene position: 5163431-5164495 (Clockwise)

Preceding gene: 120613266

Following gene: 120613272

Centisome position: 96.46

GC content: 65.92

Gene sequence:

>1065_bases
ATGGACGCACCCGTCAAGAACAACGCCGCCAACAGCGAAAAGGCCAAGGCCCTGCAGGCGGCACTCGCCCAGATCGAAAA
GCAGTTCGGCAAGGGCACCATCATGCGCCTGGGCGAAGGCGAAGCCATCGAAGATATCCAGGTCGTCTCCACCGGCTCGC
TGGGCCTGGACGTCGCCCTGGGCGTGGGCGGCCTGCCCCGCGGCCGCGTGATCGAGATCTACGGCCCCGAATCCTCCGGC
AAGACCACGCTCACGCTGCAGGTCATCGCCGAGATGCAGAAGCAGAACGGCACCTGCGCCTTCGTCGATGCCGAGCACGC
GCTCGACATCCAGTACGCCCAGAAGCTCGGCGTGCACGTGCCCGACCTGCTCATCAGCCAGCCCGACACCGGCGAGCAGG
CCCTGGAAATCGTGGACAGCCTCGTGCGCTCCGGCGCCGTGGACCTGATCGTGGTGGACTCGGTCGCAGCACTGACCCCG
AAGGCGGAAATCGAAGGCGAGATGGGCGATGCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCT
CACCGCCACGATCAAGAAGACGAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCA
GCCCCGAGACCACCACGGGCGGCAACGCGCTGAAGTTCTACGCCTCCGTGCGCCTGGACATCCGCCGCACTGGCACCATC
AAGAAGGGCGACGAGGCCATCGGCAACGAGACCAAGGTGAAGGTGGTGAAGAACAAGGTGAGCCCGCCCTTCAAGACGGC
CGAGTTCGACATCCTCTTCGGCGAAGGCATCAGCCGCGAGGGCGAGATCATCGACATGGGCGTGAATGCCCGCATCATCG
AGAAGAGCGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCACGCGAGTTCCTGCGCGAG
AACGCCGACCTCGCCCGCGAGATCGAGAACAAGGTGCGCGACGGCCTGGGCGTCTCGCAACTGCCGCCCGTGGCAGCCGG
CGCTGCTGCTGCCGACGAGGCCTGA

Upstream 100 bases:

>100_bases
ACTACTGGTCAAGCATCCAGCCTGTGATTGAAGACAGCCACCCGGTGGCATCGCACTCGCCGGCCTTCCTTTCCACGTTT
TCCTTTTTCAGGAGCACTCC

Downstream 100 bases:

>100_bases
CCCACAGGGCATCCGAAGCGCCGGCCTGCCGTTTTTCGCGGCGGGCCGGCGCGGCTGCGACTCCCATGGGTCTTTCTTCC
CCCCTCTCCCTCAAGGGCCG

Product: recombination protein RecA

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDAPVKNNAANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSG
KTTLTLQVIAEMQKQNGTCAFVDAEHALDIQYAQKLGVHVPDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALTP
KAEIEGEMGDALPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTI
KKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARIIEKSGAWYAYNGEKIGQGRDNAREFLRE
NADLAREIENKVRDGLGVSQLPPVAAGAAAADEA

Sequences:

>Translated_354_residues
MDAPVKNNAANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSG
KTTLTLQVIAEMQKQNGTCAFVDAEHALDIQYAQKLGVHVPDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALTP
KAEIEGEMGDALPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTI
KKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARIIEKSGAWYAYNGEKIGQGRDNAREFLRE
NADLAREIENKVRDGLGVSQLPPVAAGAAAADEA
>Mature_354_residues
MDAPVKNNAANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSG
KTTLTLQVIAEMQKQNGTCAFVDAEHALDIQYAQKLGVHVPDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALTP
KAEIEGEMGDALPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTI
KKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARIIEKSGAWYAYNGEKIGQGRDNAREFLRE
NADLAREIENKVRDGLGVSQLPPVAAGAAAADEA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=328, Percent_Identity=68.9024390243902, Blast_Score=469, Evalue=1e-134,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37718; Mature: 37718

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPVKNNAANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDVAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCEEEEE
GVGGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKQNGTCAFVDAEHALDIQYAQKLGVHV
CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCC
PDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALTPKAEIEGEMGDALPGLQARLM
CHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHH
SQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTI
HHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCC
KKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARIIEKSGAWY
CCCCHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCEE
AYNGEKIGQGRDNAREFLRENADLAREIENKVRDGLGVSQLPPVAAGAAAADEA
EECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDAPVKNNAANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDVAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCEEEEE
GVGGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKQNGTCAFVDAEHALDIQYAQKLGVHV
CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCC
PDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALTPKAEIEGEMGDALPGLQARLM
CHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHH
SQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTI
HHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCC
KKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARIIEKSGAWY
CCCCHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCEE
AYNGEKIGQGRDNAREFLRENADLAREIENKVRDGLGVSQLPPVAAGAAAADEA
EECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA