| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613224
Identifier: 120613224
GI number: 120613224
Start: 5110496
End: 5111014
Strand: Direct
Name: 120613224
Synonym: Aave_4591
Alternate gene names: NA
Gene position: 5110496-5111014 (Clockwise)
Preceding gene: 120613223
Following gene: 120613225
Centisome position: 95.47
GC content: 74.76
Gene sequence:
>519_bases ATGCAGACTGCCACCTTCTTTCGCACCGCCACGGCCGTTCTGGCTCTGGGAGCGCTCGCGGCATGCTCGTCCACGCCGCC ACCCACCGACCAGATGGCCGTGACCCGCACCACGGTCAACCGCGTGGCCGGCGAGCCGCAGGTCACGGCCAATGCGCCCG TGGAGCTGCAGCGGGCCCGCGACAAGCTGGCGGCCGCCGAGAAGGCCATGGCCGACAAGCAGTACGACATGGCCCGCCGC TACGCCGCAGAAGCCGAAGCGGATGCCCGCATCGCGGAGACCAAGGCCGAAGCCGCCAACAACGCCGCCACGCTGCAGCA GGTGCGCACCAGCATCCAGTCGCTCCAGTCGGAAATCACCCGGCGCGATCCCGCGCCCGCGGCCGCCCCCGGCGCGGCCG CCGTGCCCGCCCCGATGCCTGCGCCCATGACCGCGCCTGCGGTTGCGCCCCGGCCGGCCGCCACCCCGACCGCCGTGCCC GGCATGCCGGTGCCCCCCAACCCGGTCCCCGCCCGCTGA
Upstream 100 bases:
>100_bases ACCTACGCGGCCGGCCGGGGCGGCTGCCAACAATCGGAAACCTTCCTTACCGTCGCGCTCACCGCCTCCGGTATTCGCAC CCATTCAAAGGAGTTCCGCC
Downstream 100 bases:
>100_bases GCCCGACCGAACGAACGACCACCCGACAGGGAGAACCACACCATGCGCCATACCCTTCGCCGCTCCACCGCCCTCGCCGC CGCGCTCGTTGCCTCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MQTATFFRTATAVLALGALAACSSTPPPTDQMAVTRTTVNRVAGEPQVTANAPVELQRARDKLAAAEKAMADKQYDMARR YAAEAEADARIAETKAEAANNAATLQQVRTSIQSLQSEITRRDPAPAAAPGAAAVPAPMPAPMTAPAVAPRPAATPTAVP GMPVPPNPVPAR
Sequences:
>Translated_172_residues MQTATFFRTATAVLALGALAACSSTPPPTDQMAVTRTTVNRVAGEPQVTANAPVELQRARDKLAAAEKAMADKQYDMARR YAAEAEADARIAETKAEAANNAATLQQVRTSIQSLQSEITRRDPAPAAAPGAAAVPAPMPAPMTAPAVAPRPAATPTAVP GMPVPPNPVPAR >Mature_172_residues MQTATFFRTATAVLALGALAACSSTPPPTDQMAVTRTTVNRVAGEPQVTANAPVELQRARDKLAAAEKAMADKQYDMARR YAAEAEADARIAETKAEAANNAATLQQVRTSIQSLQSEITRRDPAPAAAPGAAAVPAPMPAPMTAPAVAPRPAATPTAVP GMPVPPNPVPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17689; Mature: 17689
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTATFFRTATAVLALGALAACSSTPPPTDQMAVTRTTVNRVAGEPQVTANAPVELQRAR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH DKLAAAEKAMADKQYDMARRYAAEAEADARIAETKAEAANNAATLQQVRTSIQSLQSEIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDPAPAAAPGAAAVPAPMPAPMTAPAVAPRPAATPTAVPGMPVPPNPVPAR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQTATFFRTATAVLALGALAACSSTPPPTDQMAVTRTTVNRVAGEPQVTANAPVELQRAR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH DKLAAAEKAMADKQYDMARRYAAEAEADARIAETKAEAANNAATLQQVRTSIQSLQSEIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDPAPAAAPGAAAVPAPMPAPMTAPAVAPRPAATPTAVPGMPVPPNPVPAR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA