| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is fur [H]
Identifier: 120613188
GI number: 120613188
Start: 5073921
End: 5074358
Strand: Direct
Name: fur [H]
Synonym: Aave_4555
Alternate gene names: 120613188
Gene position: 5073921-5074358 (Clockwise)
Preceding gene: 120613183
Following gene: 120613192
Centisome position: 94.79
GC content: 63.01
Gene sequence:
>438_bases ATGACGAACATCGACGAACTCAAGAGCACCGGGCTCAAGGCCACCCTGCCCCGCCTGAAGATCCTCGAGATCTTCCAGAA AGGCGCACAACGCCACATGACGGCCGAAGACGTGTTCCGTGTGCTGCTGGACGAACGTTCCGACATCGGCCTGGCCACCG TCTATCGCGTGCTCACCCAGTTCGAGCAGGCGGGCATCCTGATCCGCAGCAACTTCGAGAGCGGCAAGGCGGTGTACGAG CTCAACGAGGGCCAGCACCACGACCACTTCATCTGCATGGTCTGCGGCAAGGTCGAGGAGTTCTTCGACCCCGAGATCGA GAAGCGCCAGCAGCTCGTGGCCAAGGCCAAGGGATGGGTGGTGCAGGACCACTCGATGGCCCTCTACGGCCAATGCGCCA GCTGCGCCGCGAAAGCCTCTTCCGGCAACGGCCGCTGA
Upstream 100 bases:
>100_bases GACGGACATGGAAATTGGCATAAACGATATGATCGGACCATTGTAGCGGCTGGTCTCCCAGGCCTTGGCGCGCGCCCCTG GCACACCGAAGGACCCTGTC
Downstream 100 bases:
>100_bases CCGATTCACCCCTCTCTCAGGAGCCGTCCCGCTGCTCCATGGCGCGGCGGTGGCGCTCGACGAATTCCTGGTAGGTATCG ATGCCGCGCAGGTTGAGGAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTNIDELKSTGLKATLPRLKILEIFQKGAQRHMTAEDVFRVLLDERSDIGLATVYRVLTQFEQAGILIRSNFESGKAVYE LNEGQHHDHFICMVCGKVEEFFDPEIEKRQQLVAKAKGWVVQDHSMALYGQCASCAAKASSGNGR
Sequences:
>Translated_145_residues MTNIDELKSTGLKATLPRLKILEIFQKGAQRHMTAEDVFRVLLDERSDIGLATVYRVLTQFEQAGILIRSNFESGKAVYE LNEGQHHDHFICMVCGKVEEFFDPEIEKRQQLVAKAKGWVVQDHSMALYGQCASCAAKASSGNGR >Mature_144_residues TNIDELKSTGLKATLPRLKILEIFQKGAQRHMTAEDVFRVLLDERSDIGLATVYRVLTQFEQAGILIRSNFESGKAVYEL NEGQHHDHFICMVCGKVEEFFDPEIEKRQQLVAKAKGWVVQDHSMALYGQCASCAAKASSGNGR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=127, Percent_Identity=55.9055118110236, Blast_Score=153, Evalue=5e-39,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16260; Mature: 16129
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIDELKSTGLKATLPRLKILEIFQKGAQRHMTAEDVFRVLLDERSDIGLATVYRVLTQ CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FEQAGILIRSNFESGKAVYELNEGQHHDHFICMVCGKVEEFFDPEIEKRQQLVAKAKGWV HHHCCEEEEECCCCCCEEEEECCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCE VQDHSMALYGQCASCAAKASSGNGR ECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNIDELKSTGLKATLPRLKILEIFQKGAQRHMTAEDVFRVLLDERSDIGLATVYRVLTQ CCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH FEQAGILIRSNFESGKAVYELNEGQHHDHFICMVCGKVEEFFDPEIEKRQQLVAKAKGWV HHHCCEEEEECCCCCCEEEEECCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCE VQDHSMALYGQCASCAAKASSGNGR ECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA