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The map label for this gene is 120613103

Identifier: 120613103

GI number: 120613103

Start: 4965265

End: 4965885

Strand: Direct

Name: 120613103

Synonym: Aave_4468

Alternate gene names: NA

Gene position: 4965265-4965885 (Clockwise)

Preceding gene: 120613098

Following gene: 120613104

Centisome position: 92.76

GC content: 78.58

Gene sequence:

>621_bases
ATGGCGACGCGCACCTCCCGTCCTGCCGCCCGTTCCGCTCCCTCCTCCCCGTCCGCCCCGTCGGGCCCTCCCGCAGGCAA
TCCGCTGGCGGCGCCGGCCCAGCCCGGCGACCTGCTGCTGTACCGGCTGGTGAAGCTGGCGGCGGCATCGGGCCGCCTCG
TCACGCGGCTGTGCGAGCGCAGCCACGGCATCACGCGCCGCGAATGGGGCGTGGTGATGTGGCTGGCGCAGGAGCCGGGG
CTGCAGCCCTCGGTACTGGCGGTGCGGCTGGAGCTGGACCGCGCCCGGGTGTCGCGGGCGATCGGCTCGCTGGAGGACAA
GGGCCTGGTGCAGCGCAAGGCCCTGGCGGCCGGCCGGCCGGCAGCGCTGCACCTGACGGAGGCCGGGGCACGGCTGCATG
CCGCCCTGTGGCCGGAGGTGCGGGCCATCAACCGGGACCTGGCCCTGAGCCTGGACGCGGAGCACCTGGAGGCCCTGGAC
CGCAGCCTGGCGCGGCTGCAGGAGCGGGTCGCGCAGCTGGAGCGGCAGCCGGCGGGCGCGGCGCCGTTTCCGCCGCGCAG
CGGGGGCGCGCGGACCGGCGGGCGGCGGGGTGCGGCACCGGGCGGCGGGCCCGCGGCTTGA

Upstream 100 bases:

>100_bases
GCGCAGGGTCATGGCGGAGCACTCCATCGGCAGGGATGGCAGGCACTGTACGCAGCGGCCTCACAATTGTTCAAATCAAC
CCCGATGAGGACATTCCCGC

Downstream 100 bases:

>100_bases
TCTGGGGCAAGACCGGCCGGGCCGCGGGCGCAGGGCGGCGGCGGGCCCTGCGACAATGCCCGCCATGAGTTTCGCCCCGC
TCCAGAACGACACCTTCCTG

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: Transcriptional Regulator TrmB; MarR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MATRTSRPAARSAPSSPSAPSGPPAGNPLAAPAQPGDLLLYRLVKLAAASGRLVTRLCERSHGITRREWGVVMWLAQEPG
LQPSVLAVRLELDRARVSRAIGSLEDKGLVQRKALAAGRPAALHLTEAGARLHAALWPEVRAINRDLALSLDAEHLEALD
RSLARLQERVAQLERQPAGAAPFPPRSGGARTGGRRGAAPGGGPAA

Sequences:

>Translated_206_residues
MATRTSRPAARSAPSSPSAPSGPPAGNPLAAPAQPGDLLLYRLVKLAAASGRLVTRLCERSHGITRREWGVVMWLAQEPG
LQPSVLAVRLELDRARVSRAIGSLEDKGLVQRKALAAGRPAALHLTEAGARLHAALWPEVRAINRDLALSLDAEHLEALD
RSLARLQERVAQLERQPAGAAPFPPRSGGARTGGRRGAAPGGGPAA
>Mature_205_residues
ATRTSRPAARSAPSSPSAPSGPPAGNPLAAPAQPGDLLLYRLVKLAAASGRLVTRLCERSHGITRREWGVVMWLAQEPGL
QPSVLAVRLELDRARVSRAIGSLEDKGLVQRKALAAGRPAALHLTEAGARLHAALWPEVRAINRDLALSLDAEHLEALDR
SLARLQERVAQLERQPAGAAPFPPRSGGARTGGRRGAAPGGGPAA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21566; Mature: 21435

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRTSRPAARSAPSSPSAPSGPPAGNPLAAPAQPGDLLLYRLVKLAAASGRLVTRLCER
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
SHGITRREWGVVMWLAQEPGLQPSVLAVRLELDRARVSRAIGSLEDKGLVQRKALAAGRP
HCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
AALHLTEAGARLHAALWPEVRAINRDLALSLDAEHLEALDRSLARLQERVAQLERQPAGA
CEEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APFPPRSGGARTGGRRGAAPGGGPAA
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATRTSRPAARSAPSSPSAPSGPPAGNPLAAPAQPGDLLLYRLVKLAAASGRLVTRLCER
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
SHGITRREWGVVMWLAQEPGLQPSVLAVRLELDRARVSRAIGSLEDKGLVQRKALAAGRP
HCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
AALHLTEAGARLHAALWPEVRAINRDLALSLDAEHLEALDRSLARLQERVAQLERQPAGA
CEEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APFPPRSGGARTGGRRGAAPGGGPAA
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA