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The map label for this gene is flhB [H]

Identifier: 120613048

GI number: 120613048

Start: 4905597

End: 4906769

Strand: Direct

Name: flhB [H]

Synonym: Aave_4412

Alternate gene names: 120613048

Gene position: 4905597-4906769 (Clockwise)

Preceding gene: 120613047

Following gene: 120613049

Centisome position: 91.65

GC content: 66.92

Gene sequence:

>1173_bases
ATGGACTCCTCCAGCCAAGACAAACAGCTACCCGCGACCGAGCGCAAGCTCCAGAAAGCGCGCGAGGAAGGCCAGGCTGC
GCGGTCCCGCGATCTTTCCCACATCGCCATCCTCGGCATGGGCGCGGTCAGCATCTATGCGCTGGCCCCCTCCCTGATCG
AGCACCTGCAGCAGGCCATCGCGCACCACCTCTCGTTCAACGCAGAGACGGTGCATGCCACCGGCTCCATGCTGCAGCGG
CTGCAGGACATGACCTTCGTCGGCCTGGCCGCGAGCTTCGCCTTCGCCCTGCTGACCACCGTGGCCACCGTGGCGAGCGC
CATCGGCTCGGGCGGCTGGATCTTCACCTTCAAGCCGGTGATGCCCAATTTCACGCGGCTCAACCCGATTTCCGGCTTCG
CGAACCTGTTCTCGAAGCAGCAGATGGTCACCGTGCTCAAGATGGTGCTGATGACCGGCATCCTGGCCGCCGTGGCCTGG
AGCTTCATGAGCACCAGTATCGAGAAGATCGCGATGCTGGTGCTGCAACCCTCCCCGGTGGCCCTGCGCTACGTGGCCGA
GTGGATCACCGGCGGCATGGCGCTGCTGCTGCTGGTCGTGTTCCTCGCGGCCATCATCGACGTTCCGCTGCAGGCCTTCT
TCTTCAAGTCGCGGCAGAAGATGTCGCACGAGGAAGTGAAGCAGGAGCACAAGCAGTCCGAGGGCAGTCCCGAGGTGAAG
GGCCGCCAGCGCCAGCGGGCGCGCGACATCGCCAGCCGCGCCAGCCTGGCCAACGTGCCCAAGGCCGACTTCGTGGTGAT
GAACCCGACCCACTATGCCGTGGCCCTGCGCTACGACGAGGCCACCATGGGCGCGCCGCAGGTGGTGTCCAAGGGCACGG
ACCTGCTGGCGTTCAAGATCCGCGAACTGGCCAACCAGCACTCCGTGCCCGTCCTGCAGTCGCCCATGCTGGCCCGCGCC
CTCTACGCCAATGCCGAGCTGGAGCAGCCCATTCCCGCCCAGCTCTACGCGGCCGTGGCGCAGATCCTGGCCTATGTGTA
CCGGCTCAAGGCCGCGCTGCGCGGCGAAGGCCGCATGCCCGACGCCCAACCCGATCCCTACGTGCCGCCGGAGCTCGATC
CGCTCACGAAGGCCGCCCCATCCGACGCTTCCGCTGCAGGTGACGCGCCATGA

Upstream 100 bases:

>100_bases
GGACGGCACGGAGGAATAAGCGGCTTCCCGGCCGTCTATTCGCACTTTAGATTCCGGCACCCCTCACGACAATCGGCATG
ACCCCCTCCGTCATGCCACC

Downstream 100 bases:

>100_bases
AGACCCCCACGATCGCCTCCGCCCGCCAGTGGGCCGGCACTAATGTCTCCGCGCTGCAGGGCCTGTCGGCCCCGCTGCTG
GTGGTGGCCATCCTGGCGCT

Product: type III secretion exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDSSSQDKQLPATERKLQKAREEGQAARSRDLSHIAILGMGAVSIYALAPSLIEHLQQAIAHHLSFNAETVHATGSMLQR
LQDMTFVGLAASFAFALLTTVATVASAIGSGGWIFTFKPVMPNFTRLNPISGFANLFSKQQMVTVLKMVLMTGILAAVAW
SFMSTSIEKIAMLVLQPSPVALRYVAEWITGGMALLLLVVFLAAIIDVPLQAFFFKSRQKMSHEEVKQEHKQSEGSPEVK
GRQRQRARDIASRASLANVPKADFVVMNPTHYAVALRYDEATMGAPQVVSKGTDLLAFKIRELANQHSVPVLQSPMLARA
LYANAELEQPIPAQLYAAVAQILAYVYRLKAALRGEGRMPDAQPDPYVPPELDPLTKAAPSDASAAGDAP

Sequences:

>Translated_390_residues
MDSSSQDKQLPATERKLQKAREEGQAARSRDLSHIAILGMGAVSIYALAPSLIEHLQQAIAHHLSFNAETVHATGSMLQR
LQDMTFVGLAASFAFALLTTVATVASAIGSGGWIFTFKPVMPNFTRLNPISGFANLFSKQQMVTVLKMVLMTGILAAVAW
SFMSTSIEKIAMLVLQPSPVALRYVAEWITGGMALLLLVVFLAAIIDVPLQAFFFKSRQKMSHEEVKQEHKQSEGSPEVK
GRQRQRARDIASRASLANVPKADFVVMNPTHYAVALRYDEATMGAPQVVSKGTDLLAFKIRELANQHSVPVLQSPMLARA
LYANAELEQPIPAQLYAAVAQILAYVYRLKAALRGEGRMPDAQPDPYVPPELDPLTKAAPSDASAAGDAP
>Mature_390_residues
MDSSSQDKQLPATERKLQKAREEGQAARSRDLSHIAILGMGAVSIYALAPSLIEHLQQAIAHHLSFNAETVHATGSMLQR
LQDMTFVGLAASFAFALLTTVATVASAIGSGGWIFTFKPVMPNFTRLNPISGFANLFSKQQMVTVLKMVLMTGILAAVAW
SFMSTSIEKIAMLVLQPSPVALRYVAEWITGGMALLLLVVFLAAIIDVPLQAFFFKSRQKMSHEEVKQEHKQSEGSPEVK
GRQRQRARDIASRASLANVPKADFVVMNPTHYAVALRYDEATMGAPQVVSKGTDLLAFKIRELANQHSVPVLQSPMLARA
LYANAELEQPIPAQLYAAVAQILAYVYRLKAALRGEGRMPDAQPDPYVPPELDPLTKAAPSDASAAGDAP

Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=374, Percent_Identity=37.7005347593583, Blast_Score=218, Evalue=5e-58,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 42321; Mature: 42321

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8002587; 11677609; 3298217 [H]