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The map label for this gene is bphP [H]

Identifier: 120611842

GI number: 120611842

Start: 3513494

End: 3514822

Strand: Direct

Name: bphP [H]

Synonym: Aave_3183

Alternate gene names: 120611842

Gene position: 3513494-3514822 (Clockwise)

Preceding gene: 120611841

Following gene: 120611843

Centisome position: 65.64

GC content: 71.26

Gene sequence:

>1329_bases
ATGGTAAGCGCGGAAGAACTCTTCGACCGCATGCCCTGCGGGCTGCTGGTGACCAGCCCGTCCGGCCTGATCCTCAAGGT
CAACCGGACCCTGTGCCAGTGGACCGGCATCCCTCCGCACGAACTGGTCCGGCAGACAAAGCTGCAGGAACTCTTCACCG
TGGGCGGCCGGATCTTCCACCAGCCCCACTGGCAGCCCATGCTGGAAATGCAGGGCGCCATCTCGGAGGTCAAGCTCGAC
ATCCGCCGCGGCGACGGCACCACCTTCCCCGCCCTGCTCAACGTGGTGCGCCGCACCAGCGGCGAGGACACCTTCGACAA
GATCGCCGTGATGGTGGCCGAGGAACGCAACAAATACGAGCGCGAACTGCTGGCCGCCCGCAAGCGCGCCGACGACATGG
TGGCCAAGGAGCGGCAGGCGCAGCAGGCCCTGCAGGCGTCCCGCTCGCGCCTGCGGCAGGCCATGCAGTCCGGGGCCATC
CACGTCTGGGACCTGGACCCCGCCACCGGCCGGCGGCGCTTCGGCGCCGACGTCGCCATCCTGCTGGGGCTGGACCCGGA
CCGGCCCGTGGGCGAGGACGACTTCGTGGCCCACGTGGTGCCCGAAGACCGCGCCGTGTTCGCCGAGCAGATGATCGGCA
TCGTCAGCCACGACCTGCGCAACCCGCTCACCACCATCCTCCTGGCCACCGACCTGCTGACGCGCCAGGCGGCCTCGCCC
ACGCCCACCCCGCCGGACACGGCCGCGCGCATGCTGGGCAACATCACCCGCGCCGGGCAGCGCGCCAGGCGCCTGATCGC
CGACCTGCTCGATTTCACGGTCGTGCGCCTCGGCGCGGGCCTGAGCGTCTCGCGCCGCCCCGTGGATCTCCACCAGCTCG
CGGCCCGGATCATCGAGGAACTGTCGGTGGCCTTCCCCGGCCGCACGATCGAGCACACCATCGTGGGCGGCGGAGAGATC
AGTGCCGACCCGGACCGCATCGCCCAGCTCCTGGGCAACCTCGTGGGCAACGCCATGGCCTACGGCACGCCGGGCAGCAC
CGTCACGGTCTCCACCGCGGTGGAGTCGGGCACCGCCCGCCTGGCCGTGCACAACCACGGCGACCCCATCCCCCGGCACA
CGCTGGGCCGCCTTTTCCAGCCCATGGTGCGCGGCGTGGCCGCGGACGACACCTCCGCGCGCAGCGTGGGGCTCGGCCTG
TTCATCGTGCGTGCGATCGCGCAGGCGCATGGCGGGCAGGTGGTCGTGCAGTCCAGCCACGACCACGGCACCGAATTCGC
GTTCTCGTTTCCGGCCCGGGCGACCGAAGGTGGTGCCGTGCGGGAGTGA

Upstream 100 bases:

>100_bases
GCGGCACGCTGCGGGTCATCGAGAACGTCGGGCACTGCCCGCACCTCAGCGCCCCGGGCGCGTGCGGCGCCGTGATGGAC
GAATTCCTCGGCGCGATCGG

Downstream 100 bases:

>100_bases
GCGGGCACGCATCGGCAACGGTTTCCTGGTGCTCCACCTGTTGACAATTGGTTCCAGCGCGCCATAGTTGAGCCCATTCA
AAAAGGCGACGCCCCAGTTC

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MVSAEELFDRMPCGLLVTSPSGLILKVNRTLCQWTGIPPHELVRQTKLQELFTVGGRIFHQPHWQPMLEMQGAISEVKLD
IRRGDGTTFPALLNVVRRTSGEDTFDKIAVMVAEERNKYERELLAARKRADDMVAKERQAQQALQASRSRLRQAMQSGAI
HVWDLDPATGRRRFGADVAILLGLDPDRPVGEDDFVAHVVPEDRAVFAEQMIGIVSHDLRNPLTTILLATDLLTRQAASP
TPTPPDTAARMLGNITRAGQRARRLIADLLDFTVVRLGAGLSVSRRPVDLHQLAARIIEELSVAFPGRTIEHTIVGGGEI
SADPDRIAQLLGNLVGNAMAYGTPGSTVTVSTAVESGTARLAVHNHGDPIPRHTLGRLFQPMVRGVAADDTSARSVGLGL
FIVRAIAQAHGGQVVVQSSHDHGTEFAFSFPARATEGGAVRE

Sequences:

>Translated_442_residues
MVSAEELFDRMPCGLLVTSPSGLILKVNRTLCQWTGIPPHELVRQTKLQELFTVGGRIFHQPHWQPMLEMQGAISEVKLD
IRRGDGTTFPALLNVVRRTSGEDTFDKIAVMVAEERNKYERELLAARKRADDMVAKERQAQQALQASRSRLRQAMQSGAI
HVWDLDPATGRRRFGADVAILLGLDPDRPVGEDDFVAHVVPEDRAVFAEQMIGIVSHDLRNPLTTILLATDLLTRQAASP
TPTPPDTAARMLGNITRAGQRARRLIADLLDFTVVRLGAGLSVSRRPVDLHQLAARIIEELSVAFPGRTIEHTIVGGGEI
SADPDRIAQLLGNLVGNAMAYGTPGSTVTVSTAVESGTARLAVHNHGDPIPRHTLGRLFQPMVRGVAADDTSARSVGLGL
FIVRAIAQAHGGQVVVQSSHDHGTEFAFSFPARATEGGAVRE
>Mature_442_residues
MVSAEELFDRMPCGLLVTSPSGLILKVNRTLCQWTGIPPHELVRQTKLQELFTVGGRIFHQPHWQPMLEMQGAISEVKLD
IRRGDGTTFPALLNVVRRTSGEDTFDKIAVMVAEERNKYERELLAARKRADDMVAKERQAQQALQASRSRLRQAMQSGAI
HVWDLDPATGRRRFGADVAILLGLDPDRPVGEDDFVAHVVPEDRAVFAEQMIGIVSHDLRNPLTTILLATDLLTRQAASP
TPTPPDTAARMLGNITRAGQRARRLIADLLDFTVVRLGAGLSVSRRPVDLHQLAARIIEELSVAFPGRTIEHTIVGGGEI
SADPDRIAQLLGNLVGNAMAYGTPGSTVTVSTAVESGTARLAVHNHGDPIPRHTLGRLFQPMVRGVAADDTSARSVGLGL
FIVRAIAQAHGGQVVVQSSHDHGTEFAFSFPARATEGGAVRE

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790861, Length=300, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=29.5154185022026, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786783, Length=238, Percent_Identity=26.0504201680672, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87082128, Length=226, Percent_Identity=25.6637168141593, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=29.2181069958848, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789808, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789149, Length=308, Percent_Identity=24.025974025974, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081816, Length=231, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787894, Length=225, Percent_Identity=29.3333333333333, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=24.8908296943231, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788393, Length=220, Percent_Identity=24.5454545454545, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790346, Length=243, Percent_Identity=24.6913580246914, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=25.3393665158371, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47985; Mature: 47985

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAEELFDRMPCGLLVTSPSGLILKVNRTLCQWTGIPPHELVRQTKLQELFTVGGRIFH
CCCHHHHHHHCCCCEEEECCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHC
QPHWQPMLEMQGAISEVKLDIRRGDGTTFPALLNVVRRTSGEDTFDKIAVMVAEERNKYE
CCCCCHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RELLAARKRADDMVAKERQAQQALQASRSRLRQAMQSGAIHVWDLDPATGRRRFGADVAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHCCCCEEE
LLGLDPDRPVGEDDFVAHVVPEDRAVFAEQMIGIVSHDLRNPLTTILLATDLLTRQAASP
EEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPTPPDTAARMLGNITRAGQRARRLIADLLDFTVVRLGAGLSVSRRPVDLHQLAARIIEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LSVAFPGRTIEHTIVGGGEISADPDRIAQLLGNLVGNAMAYGTPGSTVTVSTAVESGTAR
HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCEEEEEEEECCCCEE
LAVHNHGDPIPRHTLGRLFQPMVRGVAADDTSARSVGLGLFIVRAIAQAHGGQVVVQSSH
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
DHGTEFAFSFPARATEGGAVRE
CCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVSAEELFDRMPCGLLVTSPSGLILKVNRTLCQWTGIPPHELVRQTKLQELFTVGGRIFH
CCCHHHHHHHCCCCEEEECCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHC
QPHWQPMLEMQGAISEVKLDIRRGDGTTFPALLNVVRRTSGEDTFDKIAVMVAEERNKYE
CCCCCHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RELLAARKRADDMVAKERQAQQALQASRSRLRQAMQSGAIHVWDLDPATGRRRFGADVAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHCCCCEEE
LLGLDPDRPVGEDDFVAHVVPEDRAVFAEQMIGIVSHDLRNPLTTILLATDLLTRQAASP
EEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPTPPDTAARMLGNITRAGQRARRLIADLLDFTVVRLGAGLSVSRRPVDLHQLAARIIEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LSVAFPGRTIEHTIVGGGEISADPDRIAQLLGNLVGNAMAYGTPGSTVTVSTAVESGTAR
HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCEEEEEEEECCCCEE
LAVHNHGDPIPRHTLGRLFQPMVRGVAADDTSARSVGLGLFIVRAIAQAHGGQVVVQSSH
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
DHGTEFAFSFPARATEGGAVRE
CCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]