Click here to switch to the map view.

The map label for this gene is 120611824

Identifier: 120611824

GI number: 120611824

Start: 3494716

End: 3495120

Strand: Direct

Name: 120611824

Synonym: Aave_3165

Alternate gene names: NA

Gene position: 3494716-3495120 (Clockwise)

Preceding gene: 120611823

Following gene: 120611825

Centisome position: 65.29

GC content: 73.58

Gene sequence:

>405_bases
ATGGCGCACGACACATCCCGGGCCGAAGCCCCCCGCGGCGTGGTGCTGTTCGCCCATGGCTCGCGCGACCCGCTCTGGCG
CGCACCGATCGAGGCCGTGGAGGCCCGCATGCGGCAGCAGGCGCCCGGGCTGGAGGTGCGCTGCGCCTACCTGGAACTGG
CCGAACCCGACCTGCCCACGGCGGTGCGCGAACTGGCGGCGCGCGGCGTGCGCCGGCTCACCGTGGTGCCGATGTTCCTG
GGCACCGGCAAGCATGCGCGCGAGGATCTGCCGCAACTGGTGCAGGCGCTGCGTGCAGAACACCCGGAAATGGCCGTCGC
CGTGCAGGGCGCCATCGGCGAGGATGCGCGCATGACGGCGCTGATGGCGGAGATCGCATCGGCCGAGCCCCACGCGGGGC
CTTGA

Upstream 100 bases:

>100_bases
TGCAGAACTGGTCGCCCTGGCTCACCGCGGCCGCGCCGGGCATCATCTATTCGCTGCTGTCCCTCGGTGCGTTCGGCTGG
CTGGTGCTGAGGCGATGAAC

Downstream 100 bases:

>100_bases
CGCGGTGGGCGCGCGCCGCCATGGCGGGCGGCGGTGCATTATTTTTGCGACCGGGTGACGCCGGTGGCTTAGACGATTGC
CGCATAATCAAAAGAATCCT

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: Sirohydrochlorin Cobaltochelatase; Ferrochelatase; Cobalamin Biosynthesis CbiX; Cobaltochelatase; Cobalamin Biosynthesis Protein Cbix; Cobalamin Biosynthesis Cbix Protein; Cobalamin Biosynthesis-Related Protein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAHDTSRAEAPRGVVLFAHGSRDPLWRAPIEAVEARMRQQAPGLEVRCAYLELAEPDLPTAVRELAARGVRRLTVVPMFL
GTGKHAREDLPQLVQALRAEHPEMAVAVQGAIGEDARMTALMAEIASAEPHAGP

Sequences:

>Translated_134_residues
MAHDTSRAEAPRGVVLFAHGSRDPLWRAPIEAVEARMRQQAPGLEVRCAYLELAEPDLPTAVRELAARGVRRLTVVPMFL
GTGKHAREDLPQLVQALRAEHPEMAVAVQGAIGEDARMTALMAEIASAEPHAGP
>Mature_133_residues
AHDTSRAEAPRGVVLFAHGSRDPLWRAPIEAVEARMRQQAPGLEVRCAYLELAEPDLPTAVRELAARGVRRLTVVPMFLG
TGKHAREDLPQLVQALRAEHPEMAVAVQGAIGEDARMTALMAEIASAEPHAGP

Specific function: Unknown

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14474; Mature: 14343

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDTSRAEAPRGVVLFAHGSRDPLWRAPIEAVEARMRQQAPGLEVRCAYLELAEPDLPT
CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCH
AVRELAARGVRRLTVVPMFLGTGKHAREDLPQLVQALRAEHPEMAVAVQGAIGEDARMTA
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
LMAEIASAEPHAGP
HHHHHHCCCCCCCC
>Mature Secondary Structure 
AHDTSRAEAPRGVVLFAHGSRDPLWRAPIEAVEARMRQQAPGLEVRCAYLELAEPDLPT
CCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCH
AVRELAARGVRRLTVVPMFLGTGKHAREDLPQLVQALRAEHPEMAVAVQGAIGEDARMTA
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
LMAEIASAEPHAGP
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA