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The map label for this gene is 120611820

Identifier: 120611820

GI number: 120611820

Start: 3490437

End: 3490871

Strand: Reverse

Name: 120611820

Synonym: Aave_3161

Alternate gene names: NA

Gene position: 3490871-3490437 (Counterclockwise)

Preceding gene: 120611821

Following gene: 120611819

Centisome position: 65.22

GC content: 71.03

Gene sequence:

>435_bases
ATGACCGAGATCGCCTTCCATTTCAATGCGCCGGACAAGCTCGCCTATGCGTGCCGCTTCGCGCGCAAGGCGGTGCGCAG
CGATGCGCTGCTGGTCATCACGGGACCTTCCGCCGTGCTCGATGCGGTGGACCGCGCCCTCTGGGCGCTGGGCCCGCAGG
ATTTCGTCGCCCACTGCCGCCAGGAGGACGAGGCCGATCTGCGCGAGGCCTCGCCCGTGCTGCTGGCGACCGATCCCCGC
GCCGCCACCCATGCGCAGGTGCTGCTGAACCTCGGCCCCACGGTGCCCGCGGGTTTCGAGCGCTTCGGCCGGCTGGTGGA
AGTGGTGAGTTCCACCGACGAATCCGACCGCGCCGGAGCGCGCGAGCGCTGGCGGCACTACGCCCAGCGCGGCTACGCCA
TCGTGCGCCACGACCTGGTGCTGAAGGGGGGCTGA

Upstream 100 bases:

>100_bases
GGCCGTACCCGGCGTGTCGCGGCGCCTGCCCGCCCCGCCCGGGCTGCGCGCACCGCGTGATCGCGCAGGCTGCATTCCGC
TCGATGGCGCCCGTGCCCGC

Downstream 100 bases:

>100_bases
GCGATGGCTGCGACTCCGCCCAAGGGGCCTCCCAAATTCGTGCCGACCCTCACCGATGTGGTGCAGGTCTCGGGTGATGC
GGTGCCCGGCGCAGCCCATG

Product: DNA polymerase III chi subunit, HolC

Products: NA

Alternate protein names: DNA Polymerase III Subunit Chi; DNA Polymerase III Chi Subunit; DNA Polymerase III Protein; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III Chi Subunit Superfamily; DNA-Directed DNA Polymerase

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTEIAFHFNAPDKLAYACRFARKAVRSDALLVITGPSAVLDAVDRALWALGPQDFVAHCRQEDEADLREASPVLLATDPR
AATHAQVLLNLGPTVPAGFERFGRLVEVVSSTDESDRAGARERWRHYAQRGYAIVRHDLVLKGG

Sequences:

>Translated_144_residues
MTEIAFHFNAPDKLAYACRFARKAVRSDALLVITGPSAVLDAVDRALWALGPQDFVAHCRQEDEADLREASPVLLATDPR
AATHAQVLLNLGPTVPAGFERFGRLVEVVSSTDESDRAGARERWRHYAQRGYAIVRHDLVLKGG
>Mature_143_residues
TEIAFHFNAPDKLAYACRFARKAVRSDALLVITGPSAVLDAVDRALWALGPQDFVAHCRQEDEADLREASPVLLATDPRA
ATHAQVLLNLGPTVPAGFERFGRLVEVVSSTDESDRAGARERWRHYAQRGYAIVRHDLVLKGG

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15836; Mature: 15705

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIAFHFNAPDKLAYACRFARKAVRSDALLVITGPSAVLDAVDRALWALGPQDFVAHCR
CCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHC
QEDEADLREASPVLLATDPRAATHAQVLLNLGPTVPAGFERFGRLVEVVSSTDESDRAGA
CCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
RERWRHYAQRGYAIVRHDLVLKGG
HHHHHHHHHHCCEEEHHEEEEECC
>Mature Secondary Structure 
TEIAFHFNAPDKLAYACRFARKAVRSDALLVITGPSAVLDAVDRALWALGPQDFVAHCR
CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHC
QEDEADLREASPVLLATDPRAATHAQVLLNLGPTVPAGFERFGRLVEVVSSTDESDRAGA
CCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
RERWRHYAQRGYAIVRHDLVLKGG
HHHHHHHHHHCCEEEHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA