Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120611802

Identifier: 120611802

GI number: 120611802

Start: 3467950

End: 3468831

Strand: Direct

Name: 120611802

Synonym: Aave_3142

Alternate gene names: NA

Gene position: 3467950-3468831 (Clockwise)

Preceding gene: 120611801

Following gene: 120611803

Centisome position: 64.79

GC content: 67.57

Gene sequence:

>882_bases
ATGTCCCTCTTTTCCCTGCTCGGCGCCGTCGAGATCGGGCTGATCTTCAGCCTGGTCGCGCTGGGCGTCTTCATCTCGTT
TAGGCTGCTGCGCTTTCCCGACCTGACGGTGGACGGCAGTTTCCCGCTGGGCGGCGCGGTATGCGCCGTGCTCATCTCCA
CGGGCACCAACCCCTACGTGGCCACGCTCGCGGCCACCGCGGCAGGCGCGGCGGCCGGCCTCGTCACCGGCTGGCTCAAC
GTCAAGCTCAAGATCATGGACCTGCTGGCCAGCATCCTGATGATGATCGCGCTCTATTCGATCAACCTGCGCATCATGGG
CGGCCCCAACGTGCCGCTCATCAACGACCCGACCCTGTTCACGCTGCTGCAGCCCGAGGGCCTGGCCGACTACATCGCCC
GCCCCGCCCTGCTGCTGGTGATCGTGATCGCCGCCAAGCTGGCCATGGACTGGTTCTTCGCCACCGAACGCGGCCTGGCC
ATCCGGGCGACCGGCTCCAACGCCCGCATGGCCCGCGCCCAGGGCGTGAACACCGGCGCCATGGTGCTGCTGGGCATGGC
CGTGTCGAACGCGCTGGTGGCCCTCGCCGGCGCGCTCTTCGCGCAGACGCAGGGCGGCTCGGACATCTCCATGGGCATCG
GCACCATCGTGATCGGCCTGGCCGCCGTGATCGTGGGCGAGAGCATCCTGCCCTCGCGCCGGCTGGTGTGGGCGACGCTC
GCCGTCGTCATCGGTGCCATCGTCTATCGCTTCTTCATCGCGCTGGCGCTCAACAGCGACTTCATCGGCCTGAAGGCGCA
GGACCTGAACCTGGTGACGGCGGTGCTGGTGACGGTCGCCCTGGTGATCCCCCAAATCAAACGCAAGCTCGCGTCGAAAT
GA

Upstream 100 bases:

>100_bases
TGAAGTAAGGTTCGAGGTTCCGCTCCCGGCGCGCGCCGGGAACACCCATGACCGCAGGAGCCTCGGCTCCTGTTTCGTTT
TTCCCGAAGCCTTCCCCGCC

Downstream 100 bases:

>100_bases
AGTACATCCCCCTGAGGCGCTGCGCGCCTTCCCCCTTCTCTCGGCTGCGCCGGGAAGGGGGACGCCGCCAGCGCGGCGGG
GCGGCCCTTGCGCGGCGGCC

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYVATLAATAAGAAAGLVTGWLN
VKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLFTLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLA
IRATGSNARMARAQGVNTGAMVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL
AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK

Sequences:

>Translated_293_residues
MSLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYVATLAATAAGAAAGLVTGWLN
VKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLFTLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLA
IRATGSNARMARAQGVNTGAMVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL
AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK
>Mature_292_residues
SLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYVATLAATAAGAAAGLVTGWLNV
KLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLFTLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLAI
RATGSNARMARAQGVNTGAMVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATLA
VVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30478; Mature: 30347

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCHH
ATLAATAAGAAAGLVTGWLNVKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEE
TLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLAIRATGSNARMARAQGVNTGA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCHHH
MVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK
HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCHH
ATLAATAAGAAAGLVTGWLNVKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEE
TLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLAIRATGSNARMARAQGVNTGA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCHHH
MVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK
HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]