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The map label for this gene is uhpA [C]

Identifier: 120611788

GI number: 120611788

Start: 3451693

End: 3452238

Strand: Direct

Name: uhpA [C]

Synonym: Aave_3128

Alternate gene names: 120611788

Gene position: 3451693-3452238 (Clockwise)

Preceding gene: 120611784

Following gene: 120611789

Centisome position: 64.48

GC content: 67.95

Gene sequence:

>546_bases
ATGGATGTCGCCGATTACCGCCTCGCGTTCGACATGGCCCCGGTGGGCCTGGTCATCTCGCGCAACCGCACCATGGTGGA
CTGCAACCGGCAGGTGTGCGAGATGTTCGGCGCCTCGCGCGAGGTGCTGATCGGCCAGTCGTTCCGCATTCTCTACCCCA
GTGCCGACGAGTACGAGCGCCTGGGCCGGCGCATGGAGCCCATCCTGAATGCGAAGGGCCACTACGCGGACAACCGCATC
ATGCGCCGGACCAGCGGCGAGGTGTTCTGGTGCCACGTATCGGGCCGGGCGCTCAACCGCGAGGACCCGCACGAATCGGG
CATCTGGAGCTTCGAGGACCTGAGCTCGCAGCGCCCGGTGAAGGCCGAGCTCACGGGCCGCGAACGCGAGGTGGCCGCGC
GCCTGCTGGACGGGATGACCTCCAAGGAGATCGGCCGGGCGCTGGACATCAGCCACCGCACGGTGGAGATCTACCGGGCG
CGCCTGATGCGCAAGTACGGCGCCTCGACCGCCGCCGATCTGGTGCAGAAATTGATGGCCGGCTGA

Upstream 100 bases:

>100_bases
GGAGGGGAAAAGCTTGTTCACTTGGAGACTCCTCAACAACAAGGTGGATGGCCGCTACGATACTACGTATATCGTTACGT
AGTTCTCCCTAAATACTTCC

Downstream 100 bases:

>100_bases
GGGCGGAAGACCGGACCGGAAAACACCTGGTTGCATTTCCTCCCCTGTGGTGGGGTTCGGAACGAACGGGCTGGCAGATA
ACTTTCGCGCCTTCCCAACC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Diguanylate Cyclase/Phosphodiesterase; Two-Component Sensor; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Transcriptional Regulator Luxr Family; Transcription Regulator Protein; LuxR Family Regulatory Protein; PAS Domain-Containing Protein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MDVADYRLAFDMAPVGLVISRNRTMVDCNRQVCEMFGASREVLIGQSFRILYPSADEYERLGRRMEPILNAKGHYADNRI
MRRTSGEVFWCHVSGRALNREDPHESGIWSFEDLSSQRPVKAELTGREREVAARLLDGMTSKEIGRALDISHRTVEIYRA
RLMRKYGASTAADLVQKLMAG

Sequences:

>Translated_181_residues
MDVADYRLAFDMAPVGLVISRNRTMVDCNRQVCEMFGASREVLIGQSFRILYPSADEYERLGRRMEPILNAKGHYADNRI
MRRTSGEVFWCHVSGRALNREDPHESGIWSFEDLSSQRPVKAELTGREREVAARLLDGMTSKEIGRALDISHRTVEIYRA
RLMRKYGASTAADLVQKLMAG
>Mature_181_residues
MDVADYRLAFDMAPVGLVISRNRTMVDCNRQVCEMFGASREVLIGQSFRILYPSADEYERLGRRMEPILNAKGHYADNRI
MRRTSGEVFWCHVSGRALNREDPHESGIWSFEDLSSQRPVKAELTGREREVAARLLDGMTSKEIGRALDISHRTVEIYRA
RLMRKYGASTAADLVQKLMAG

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20614; Mature: 20614

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVADYRLAFDMAPVGLVISRNRTMVDCNRQVCEMFGASREVLIGQSFRILYPSADEYER
CCCCHHHHHHHCCCEEEEEECCCEEEHHCHHHHHHHCCCCEEEECCCEEEECCCCHHHHH
LGRRMEPILNAKGHYADNRIMRRTSGEVFWCHVSGRALNREDPHESGIWSFEDLSSQRPV
HHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCE
KAELTGREREVAARLLDGMTSKEIGRALDISHRTVEIYRARLMRKYGASTAADLVQKLMA
EEECCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
G
C
>Mature Secondary Structure
MDVADYRLAFDMAPVGLVISRNRTMVDCNRQVCEMFGASREVLIGQSFRILYPSADEYER
CCCCHHHHHHHCCCEEEEEECCCEEEHHCHHHHHHHCCCCEEEECCCEEEECCCCHHHHH
LGRRMEPILNAKGHYADNRIMRRTSGEVFWCHVSGRALNREDPHESGIWSFEDLSSQRPV
HHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCE
KAELTGREREVAARLLDGMTSKEIGRALDISHRTVEIYRARLMRKYGASTAADLVQKLMA
EEECCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA