| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is bugT [H]
Identifier: 120611784
GI number: 120611784
Start: 3448348
End: 3449370
Strand: Direct
Name: bugT [H]
Synonym: Aave_3124
Alternate gene names: 120611784
Gene position: 3448348-3449370 (Clockwise)
Preceding gene: 120611783
Following gene: 120611788
Centisome position: 64.42
GC content: 73.02
Gene sequence:
>1023_bases ATGATGCCTTCTTCCCACCCCCGGCCATCTTCCCTCGGCGTGGACCGCCGCATGTTCTCCATCGGCGTGCTCGGCACGGC CCTTTGCGCATCGGGCCGCCCGGGCGCGGCGCTCGCGCAGGAGGCGTGGCCGGCGCGGACCGTGCGGGTCGTGGTGCCCT TCCCGCCGGGCGGCGGCACTGATCTGGTGGCGCGCGCGATCAGCCAGCGCCTGGGCGAACGCCTCGGGCAGCCGGTGGTC GTGGACAACCGCCCCGGCGCGGCCACCGCGATCGGTGCGGATGCCGTGGCCAAGGCCGCGCCCGACGGCTACACGCTGCT GCTGTCGGGATCGAGCACCTACACGGTCAATCCGGCGCTGCGCAGCCGCCTGCCCTACGATCCGTTGCGCGACCTGGAAC CGGTGATGATCGTGGCCCGCACGCCCCTGGTGCTGGTGGTGGCCGCGCGCCAGCCCTGGCGCTCCGTGGCCGACCTGGTG CGGGATGCGCGAAACCGGCCCGGCAGCATCCGCTATGCGACCTTCGGCCCGGGATCGGCGCCGCACCTGGCCGGCGAGCT TTTCGCCCTGGCGACGGGCACGAAGCTGCAGGACGTACCGTACCGGGGCAGCAGCCAGACGACGGTGGCGGTGATCGGCG GAGAGATCGAACTGGGAATCGACACGGTGGCCGCGGTGGCGCCCCATGTGCGCTCCGGCAAGCTGCGCGCGCTGGCCATC GTGGGCCCGGGCAGGGCCAGCCTGCTGCCCGACGTCGTGGCCATGACCGAGACGCCCTGGCCGGATGCGGTCTTCGATGG CTGGTATGCGTGGTCTGCACCGGCGCGCACGCCGCAGCCGGTGCTGGCGCGGCTCGCCAGCGAGATCCAGGCGGTGCTCG CGGAGCCGGGCCTGCGGACCCAGCTGCGCAGCCAGGGAATGGAGCCGGTTTCGATCGGTGCCGCCGGGTTCCGGCAACAG ATGGAAACGGAAATCGGACGCTACCGGGCGCTGGCCCACCGCGCCGGCATCGTCGTCGAATGA
Upstream 100 bases:
>100_bases GGCATGCCGCCTCCCTGGACGGCCCGCAGGCCTGCCGCGGTGCCGGCCTGAGCCTTTCTTTTCCCCTTCCCTCCGGCTTC CGGACAGCCCCTGTCGCACC
Downstream 100 bases:
>100_bases TGATGCCCGCGCATCCCTTCCGGGATGTGCGGGCGTGCAGGGGAATCAGTTCGCTGCGACGGAGCGCACGAGGCCCATCT CGGAGCTGCTCAGCAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MMPSSHPRPSSLGVDRRMFSIGVLGTALCASGRPGAALAQEAWPARTVRVVVPFPPGGGTDLVARAISQRLGERLGQPVV VDNRPGAATAIGADAVAKAAPDGYTLLLSGSSTYTVNPALRSRLPYDPLRDLEPVMIVARTPLVLVVAARQPWRSVADLV RDARNRPGSIRYATFGPGSAPHLAGELFALATGTKLQDVPYRGSSQTTVAVIGGEIELGIDTVAAVAPHVRSGKLRALAI VGPGRASLLPDVVAMTETPWPDAVFDGWYAWSAPARTPQPVLARLASEIQAVLAEPGLRTQLRSQGMEPVSIGAAGFRQQ METEIGRYRALAHRAGIVVE
Sequences:
>Translated_340_residues MMPSSHPRPSSLGVDRRMFSIGVLGTALCASGRPGAALAQEAWPARTVRVVVPFPPGGGTDLVARAISQRLGERLGQPVV VDNRPGAATAIGADAVAKAAPDGYTLLLSGSSTYTVNPALRSRLPYDPLRDLEPVMIVARTPLVLVVAARQPWRSVADLV RDARNRPGSIRYATFGPGSAPHLAGELFALATGTKLQDVPYRGSSQTTVAVIGGEIELGIDTVAAVAPHVRSGKLRALAI VGPGRASLLPDVVAMTETPWPDAVFDGWYAWSAPARTPQPVLARLASEIQAVLAEPGLRTQLRSQGMEPVSIGAAGFRQQ METEIGRYRALAHRAGIVVE >Mature_340_residues MMPSSHPRPSSLGVDRRMFSIGVLGTALCASGRPGAALAQEAWPARTVRVVVPFPPGGGTDLVARAISQRLGERLGQPVV VDNRPGAATAIGADAVAKAAPDGYTLLLSGSSTYTVNPALRSRLPYDPLRDLEPVMIVARTPLVLVVAARQPWRSVADLV RDARNRPGSIRYATFGPGSAPHLAGELFALATGTKLQDVPYRGSSQTTVAVIGGEIELGIDTVAAVAPHVRSGKLRALAI VGPGRASLLPDVVAMTETPWPDAVFDGWYAWSAPARTPQPVLARLASEIQAVLAEPGLRTQLRSQGMEPVSIGAAGFRQQ METEIGRYRALAHRAGIVVE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35773; Mature: 35773
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPSSHPRPSSLGVDRRMFSIGVLGTALCASGRPGAALAQEAWPARTVRVVVPFPPGGGT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCH DLVARAISQRLGERLGQPVVVDNRPGAATAIGADAVAKAAPDGYTLLLSGSSTYTVNPAL HHHHHHHHHHHHHHHCCCEEEECCCCCCEEECHHHHHHCCCCCEEEEEECCCEEEECHHH RSRLPYDPLRDLEPVMIVARTPLVLVVAARQPWRSVADLVRDARNRPGSIRYATFGPGSA HHCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC PHLAGELFALATGTKLQDVPYRGSSQTTVAVIGGEIELGIDTVAAVAPHVRSGKLRALAI CHHHHHHHEEECCCEECCCCCCCCCCCEEEEECCEEEECHHHHHHHCCCCCCCCEEEEEE VGPGRASLLPDVVAMTETPWPDAVFDGWYAWSAPARTPQPVLARLASEIQAVLAEPGLRT ECCCCHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHH QLRSQGMEPVSIGAAGFRQQMETEIGRYRALAHRAGIVVE HHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEC >Mature Secondary Structure MMPSSHPRPSSLGVDRRMFSIGVLGTALCASGRPGAALAQEAWPARTVRVVVPFPPGGGT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCH DLVARAISQRLGERLGQPVVVDNRPGAATAIGADAVAKAAPDGYTLLLSGSSTYTVNPAL HHHHHHHHHHHHHHHCCCEEEECCCCCCEEECHHHHHHCCCCCEEEEEECCCEEEECHHH RSRLPYDPLRDLEPVMIVARTPLVLVVAARQPWRSVADLVRDARNRPGSIRYATFGPGSA HHCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC PHLAGELFALATGTKLQDVPYRGSSQTTVAVIGGEIELGIDTVAAVAPHVRSGKLRALAI CHHHHHHHEEECCCEECCCCCCCCCCCEEEEECCEEEECHHHHHHHCCCCCCCCEEEEEE VGPGRASLLPDVVAMTETPWPDAVFDGWYAWSAPARTPQPVLARLASEIQAVLAEPGLRT ECCCCHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHH QLRSQGMEPVSIGAAGFRQQMETEIGRYRALAHRAGIVVE HHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]