| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611781
Identifier: 120611781
GI number: 120611781
Start: 3444495
End: 3445811
Strand: Direct
Name: 120611781
Synonym: Aave_3121
Alternate gene names: NA
Gene position: 3444495-3445811 (Clockwise)
Preceding gene: 120611778
Following gene: 120611783
Centisome position: 64.35
GC content: 71.22
Gene sequence:
>1317_bases ATGGACAGGCCGCTTTCCCGCGGCGGGCCCCGCCCTTCCCTGCTTTCACCTTCGGACCGCTTCGTGAGTGCCTCTGACGA TCTTCCGCCCTCCCCCGGCGAATACACCCTCCAATGCCATGGCTCGCCCGGGGACGTGAATGCCCGGGAGTGGGACGCCC TGCTCGAGGCCCAGGCCGCGCCGACGCCGTTCATGCGGCACGCCTACCTGGCCGCACTGCATGCCAGCGGCAGCGCCGTG CCGGAATCCGGCTGGTCGCCCGTGTTCTGCACCCTGCGCCGGTCGGGCGTGCTGGTGGGCGCGTGCGTGCTGTACGCCAA GCCCCATTCCTACGGCGAGTACGTGTTCGACCATGCCTGGGCCCACGCCTACGCCCGGCATGGCGTGGAGTACTACCCCA AGGCGGTGGTCGCGGTACCGTTCACCCCGGTGCCCGGTGCACGGCTGCTGGCGATGGACGACGCCGCGCGCGAGGTACTC GTCCGGGCGCTGGTGCAGTGGTGCGAGGAAGCGGGCATGTCGTCGCTGCACCTGCTGTTCGCCGCGCCGCAGGACGTGGA GGCCGCCCGCGCGGCGGGGCTGATGCTGCGGCAGACGGTGCAGTTCCACTGGCGCAATGCCGATCCGGCCACGGGCGCGG CCTTCGCCACGTTCGACGCATTCCTCGCGACGCTCTCGCAGGACAAGCGCAAGAAGATCCGCCAGGAACGCCGCCGTGTG GCGGACGCCGGCGTGACCTTCCGCTGGGCACGCGGCAGAGGCATCGGCCCGCAGGACTGGGATTTCTTCTACCGCTGCTA CGAGCGCACGTATTGGGAACACGGCAACCCGCCGTATCTCACGCGCGACTTCTTCCACCGGATGGAGCGCGAGATGCCCG AGGCCTGGCTGCTCTTCGTGGCGGAGCGCGGTGGCGAGCCGATCGCCTGCAGCCTGGTCGCGCTGGGCGAGGATGCGGGT CCGCACGGCGGGCTGGTGGCGTATGGGCGCTACTGGGGCGCGATGGAGCGCGTGGACTGCCTGCATTTCGAGGCCTGCTA CTACCAGCCGCTGGCCTGGTGCATCGCGCACGGCGCCGACCGCTTCGAGGGGGGCGCGCAAGGCGAGCACAAGATGGCCC GGGCGCTGATGCCGGTGGCGACCTCCAGCGCGCACTGGCTGGCGCATCCCGGGTTCGCGGCGGCGGTGGAGGATTTCCTG CACCGCGAAGGCCGGGGCGTGCAGGGCTATCTGCAGGAACTGGAGGCGCACAGCCCGTTCCGGTCCGCGGACAGTCCTCG GTGCCGGGACGCAGGCCCCACCGGCTCGGGCGGCTGA
Upstream 100 bases:
>100_bases GTAAACCCTTGTGAAGATTACAGATTTATTGCAGTGCCGTATTTTTGGGCAGTGGATCGGGCATCTCCACGGCGGACGGG GAGACTGCTTTTGCGCCATC
Downstream 100 bases:
>100_bases CGGCGGGACGGTCCCGCGGCCTCAGGGCAGCGCGCCGGCGTTTTCGATGGCGCCCCGGAGGGCATCGAGACAGGCGCGAA GGGGTGTGGGCAATGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MDRPLSRGGPRPSLLSPSDRFVSASDDLPPSPGEYTLQCHGSPGDVNAREWDALLEAQAAPTPFMRHAYLAALHASGSAV PESGWSPVFCTLRRSGVLVGACVLYAKPHSYGEYVFDHAWAHAYARHGVEYYPKAVVAVPFTPVPGARLLAMDDAAREVL VRALVQWCEEAGMSSLHLLFAAPQDVEAARAAGLMLRQTVQFHWRNADPATGAAFATFDAFLATLSQDKRKKIRQERRRV ADAGVTFRWARGRGIGPQDWDFFYRCYERTYWEHGNPPYLTRDFFHRMEREMPEAWLLFVAERGGEPIACSLVALGEDAG PHGGLVAYGRYWGAMERVDCLHFEACYYQPLAWCIAHGADRFEGGAQGEHKMARALMPVATSSAHWLAHPGFAAAVEDFL HREGRGVQGYLQELEAHSPFRSADSPRCRDAGPTGSGG
Sequences:
>Translated_438_residues MDRPLSRGGPRPSLLSPSDRFVSASDDLPPSPGEYTLQCHGSPGDVNAREWDALLEAQAAPTPFMRHAYLAALHASGSAV PESGWSPVFCTLRRSGVLVGACVLYAKPHSYGEYVFDHAWAHAYARHGVEYYPKAVVAVPFTPVPGARLLAMDDAAREVL VRALVQWCEEAGMSSLHLLFAAPQDVEAARAAGLMLRQTVQFHWRNADPATGAAFATFDAFLATLSQDKRKKIRQERRRV ADAGVTFRWARGRGIGPQDWDFFYRCYERTYWEHGNPPYLTRDFFHRMEREMPEAWLLFVAERGGEPIACSLVALGEDAG PHGGLVAYGRYWGAMERVDCLHFEACYYQPLAWCIAHGADRFEGGAQGEHKMARALMPVATSSAHWLAHPGFAAAVEDFL HREGRGVQGYLQELEAHSPFRSADSPRCRDAGPTGSGG >Mature_438_residues MDRPLSRGGPRPSLLSPSDRFVSASDDLPPSPGEYTLQCHGSPGDVNAREWDALLEAQAAPTPFMRHAYLAALHASGSAV PESGWSPVFCTLRRSGVLVGACVLYAKPHSYGEYVFDHAWAHAYARHGVEYYPKAVVAVPFTPVPGARLLAMDDAAREVL VRALVQWCEEAGMSSLHLLFAAPQDVEAARAAGLMLRQTVQFHWRNADPATGAAFATFDAFLATLSQDKRKKIRQERRRV ADAGVTFRWARGRGIGPQDWDFFYRCYERTYWEHGNPPYLTRDFFHRMEREMPEAWLLFVAERGGEPIACSLVALGEDAG PHGGLVAYGRYWGAMERVDCLHFEACYYQPLAWCIAHGADRFEGGAQGEHKMARALMPVATSSAHWLAHPGFAAAVEDFL HREGRGVQGYLQELEAHSPFRSADSPRCRDAGPTGSGG
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48361; Mature: 48361
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPLSRGGPRPSLLSPSDRFVSASDDLPPSPGEYTLQCHGSPGDVNAREWDALLEAQAA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC PTPFMRHAYLAALHASGSAVPESGWSPVFCTLRRSGVLVGACVLYAKPHSYGEYVFDHAW CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCEEEEEEEEEECCCCHHHHHHHHHH AHAYARHGVEYYPKAVVAVPFTPVPGARLLAMDDAAREVLVRALVQWCEEAGMSSLHLLF HHHHHHCCHHHCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEE AAPQDVEAARAAGLMLRQTVQFHWRNADPATGAAFATFDAFLATLSQDKRKKIRQERRRV ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADAGVTFRWARGRGIGPQDWDFFYRCYERTYWEHGNPPYLTRDFFHRMEREMPEAWLLFV HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHEEEE AERGGEPIACSLVALGEDAGPHGGLVAYGRYWGAMERVDCLHFEACYYQPLAWCIAHGAD HHCCCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RFEGGAQGEHKMARALMPVATSSAHWLAHPGFAAAVEDFLHREGRGVQGYLQELEAHSPF HCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC RSADSPRCRDAGPTGSGG CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRPLSRGGPRPSLLSPSDRFVSASDDLPPSPGEYTLQCHGSPGDVNAREWDALLEAQAA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC PTPFMRHAYLAALHASGSAVPESGWSPVFCTLRRSGVLVGACVLYAKPHSYGEYVFDHAW CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCEEEEEEEEEECCCCHHHHHHHHHH AHAYARHGVEYYPKAVVAVPFTPVPGARLLAMDDAAREVLVRALVQWCEEAGMSSLHLLF HHHHHHCCHHHCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEE AAPQDVEAARAAGLMLRQTVQFHWRNADPATGAAFATFDAFLATLSQDKRKKIRQERRRV ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADAGVTFRWARGRGIGPQDWDFFYRCYERTYWEHGNPPYLTRDFFHRMEREMPEAWLLFV HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHEEEE AERGGEPIACSLVALGEDAGPHGGLVAYGRYWGAMERVDCLHFEACYYQPLAWCIAHGAD HHCCCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RFEGGAQGEHKMARALMPVATSSAHWLAHPGFAAAVEDFLHREGRGVQGYLQELEAHSPF HCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC RSADSPRCRDAGPTGSGG CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA