| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yedI [H]
Identifier: 120611755
GI number: 120611755
Start: 3414829
End: 3415815
Strand: Reverse
Name: yedI [H]
Synonym: Aave_3095
Alternate gene names: 120611755
Gene position: 3415815-3414829 (Counterclockwise)
Preceding gene: 120611757
Following gene: 120611754
Centisome position: 63.81
GC content: 69.6
Gene sequence:
>987_bases ATGGCCGGCGCCAGCCTTCTCACCCTGCTCGACGATATCGCCGCGGTGCTCGACGACGTCGCCCTGATGACCAAAGTGGC GGCGAAGAAGAGCGTCGCGATGGCCGACGATGTGTCGGTGATGACCAAGGCGGCCGCGCAGAAGACCGCCGGTGTGCTCG GCGACGACCTCGCGCTGAACGCGCAGCAGGTGACCGGCGTGCGCGCCGAGCGCGAACTGCCGGTGGTCTGGGCGGTGGCC AAGGGTTCGCTCGTGAACAAGGCCATCCTGGTGCCCGCGGCGCTGTTGATCAGCGCGTTCATTCCCTGGGCCGTCACGCC TTTGCTGATGCTGGGAGGGGCGTTCCTGTGCTTCGAAGGCGCGGAGAAGCTGGCGCACCGGTTCCTGCACCATGACGGCG CGGGAAAGGAAGAGGACCGCGAGGCCCACGCCCAGGCCGCCGCGAACGCCGCCGTGGACATGGCAGCCTTCGAGAAGGAC AAGGTGCGCGGAGCGGTCCGTACGGATTTCATCCTGTCCGCGGAGATCATCGCGATCACGCTGGGCACGGTGGCCGGCGC GCCTTTCAGCCAGCAGGTGGCGGTGCTGTCGGGAATCGCGCTGGTCATGACCGCCGGGGTGTACGGGCTGGTCGCCGGCA TCGTGAAGCTCGATGACGCCGGTCTCTGGCTCAGCCACCGCTCCTTCGGCGCCCTGCGCGTGCTGGGTCGCGGCATCGTG GCGACGGCGCCCTGGCTGATGAAGGCGCTTTCCGTCGCGGGGACCGCCGCCATGTTCCTGGTCGGTGGAGGCATCCTGGT GCACGGCCTGCCTCCGCTGCACCACGCGGTGGAAGGATGGGCCTCCGCTGCTGTGCAGGGCGGGCTCCTGCACGTGGTGG TGCTCAACCTGCTCAATGCCGCGAGCGGCATCGTGGCCGGCGCGCTGGTGCTGGCCGGCGTGACGCTCGTGCAACGCTGG CGCGGGCGCAAGGCCGGGACGCATTGA
Upstream 100 bases:
>100_bases TCTCAACCTTGGCTTTTGCAAGGGTGTTTCCTCTCGTGCATGCCGGCGGCGTACCCGGCATGGCCCCCATAATCGGCGCC TCTCAACCACGGAGCTTCGC
Downstream 100 bases:
>100_bases GACCCCGCATGGCCTTTTGATCTGTGGCAAGGCGGGCAGGGCGTTTTGCAAGCCCAATGCGTCCACGGGGGCCGTCCCCG TTCAACCGCATCGAGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAGASLLTLLDDIAAVLDDVALMTKVAAKKSVAMADDVSVMTKAAAQKTAGVLGDDLALNAQQVTGVRAERELPVVWAVA KGSLVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEGAEKLAHRFLHHDGAGKEEDREAHAQAAANAAVDMAAFEKD KVRGAVRTDFILSAEIIAITLGTVAGAPFSQQVAVLSGIALVMTAGVYGLVAGIVKLDDAGLWLSHRSFGALRVLGRGIV ATAPWLMKALSVAGTAAMFLVGGGILVHGLPPLHHAVEGWASAAVQGGLLHVVVLNLLNAASGIVAGALVLAGVTLVQRW RGRKAGTH
Sequences:
>Translated_328_residues MAGASLLTLLDDIAAVLDDVALMTKVAAKKSVAMADDVSVMTKAAAQKTAGVLGDDLALNAQQVTGVRAERELPVVWAVA KGSLVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEGAEKLAHRFLHHDGAGKEEDREAHAQAAANAAVDMAAFEKD KVRGAVRTDFILSAEIIAITLGTVAGAPFSQQVAVLSGIALVMTAGVYGLVAGIVKLDDAGLWLSHRSFGALRVLGRGIV ATAPWLMKALSVAGTAAMFLVGGGILVHGLPPLHHAVEGWASAAVQGGLLHVVVLNLLNAASGIVAGALVLAGVTLVQRW RGRKAGTH >Mature_327_residues AGASLLTLLDDIAAVLDDVALMTKVAAKKSVAMADDVSVMTKAAAQKTAGVLGDDLALNAQQVTGVRAERELPVVWAVAK GSLVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEGAEKLAHRFLHHDGAGKEEDREAHAQAAANAAVDMAAFEKDK VRGAVRTDFILSAEIIAITLGTVAGAPFSQQVAVLSGIALVMTAGVYGLVAGIVKLDDAGLWLSHRSFGALRVLGRGIVA TAPWLMKALSVAGTAAMFLVGGGILVHGLPPLHHAVEGWASAAVQGGLLHVVVLNLLNAASGIVAGALVLAGVTLVQRWR GRKAGTH
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=323, Percent_Identity=58.2043343653251, Blast_Score=356, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 33619; Mature: 33488
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASLLTLLDDIAAVLDDVALMTKVAAKKSVAMADDVSVMTKAAAQKTAGVLGDDLALN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC AQQVTGVRAERELPVVWAVAKGSLVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEG HHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AEKLAHRFLHHDGAGKEEDREAHAQAAANAAVDMAAFEKDKVRGAVRTDFILSAEIIAIT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LGTVAGAPFSQQVAVLSGIALVMTAGVYGLVAGIVKLDDAGLWLSHRSFGALRVLGRGIV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCHH ATAPWLMKALSVAGTAAMFLVGGGILVHGLPPLHHAVEGWASAAVQGGLLHVVVLNLLNA HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ASGIVAGALVLAGVTLVQRWRGRKAGTH HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AGASLLTLLDDIAAVLDDVALMTKVAAKKSVAMADDVSVMTKAAAQKTAGVLGDDLALN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC AQQVTGVRAERELPVVWAVAKGSLVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEG HHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AEKLAHRFLHHDGAGKEEDREAHAQAAANAAVDMAAFEKDKVRGAVRTDFILSAEIIAIT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LGTVAGAPFSQQVAVLSGIALVMTAGVYGLVAGIVKLDDAGLWLSHRSFGALRVLGRGIV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCHH ATAPWLMKALSVAGTAAMFLVGGGILVHGLPPLHHAVEGWASAAVQGGLLHVVVLNLLNA HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ASGIVAGALVLAGVTLVQRWRGRKAGTH HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]