| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611745
Identifier: 120611745
GI number: 120611745
Start: 3401096
End: 3402124
Strand: Reverse
Name: 120611745
Synonym: Aave_3085
Alternate gene names: NA
Gene position: 3402124-3401096 (Counterclockwise)
Preceding gene: 120611748
Following gene: 120611744
Centisome position: 63.56
GC content: 69.68
Gene sequence:
>1029_bases ATGCCTCTTTCAGCCGTCCGATCGTCCAGTTCCTCTGCGCCCACAGCATTGCTGCGAAGTGCGGATGCGGAGGGCCGCCT CGCGGCGCAGGGCCGGTCCGCGCCCGCCGCGGCGCCCTTGCTGCGCTCGCTGTCGTCGCCGCACCTGAGCCCGCTTGCGG AGCGCGATCGAGAGGCCGGGATGCGCCGGGAGGCCGCCTTGGCGGCGCGGTTCGGCAGTTGCCAGCCCGCGCGGGGCAAG GCAAAGACCGGCGCGGATGGCCAGGTGAGCCACCGCAGCCCGATACAGAAGCAGGAACTCGAACCGGCGCAGCACGGCTA TCGCCGGGTGCGCGTGAACCCGACGCGGGTGCTCATCGCCGAGCACCAGGGTCCTGAAACCAGCACATTCTTCATCCGCC GCCAGGCCGACCTGGAGGCGGTGCGGCGCGTCGATAGGCCGGCGGAAGCCGCACGCACGGGCGCGGGCCCGCTGCAGGAT CTGCTCCGCCTGGACGACCTGCGCGCCCAACGCATCCAGTACAAGTGGGACATCTCCGCCAACGGTTCGCTGGTCATCGG TGAAGTGCTGGTCGGCGCTCCCGAGAGTGTGCGCGAACAGGTCGCGGCCGGTCTCCGGAAGAAGGCGGAGGATGCCTCGC GGCCGCCGGCGGCCATGAAGGAGAAAAAACAGAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGGACGCCACCAGGAATGCG GACCCCGATCCACGCCAGTTCATGCTGGGCCACGTGACGCTGGTGGGCGGCGCGCTCATCGCCGAGCCGTGGCAGGCCAC GCGTGGCCTGCCGCAGGCGCACATCAGCGGGACGCTGTATGCCCGCCCGGACGGCACGCTGTGCATCGACAACGATTCCG GCCGCTTCAGCGAATACGAAGACCGCGTGCTCGCGCATCTGAAATCGGTGGCGGACATGTTCGCGCGGCTCGGCCTGCCC GTGGCCGTGGATTGGATGCCGAAGGCACCCATCCCCCTGGCCCGTCCGGCGCCGCGCGCTCCGGGGTGA
Upstream 100 bases:
>100_bases ACTTCGGCCCGGGGCCGCCCGTCTTCGCCTCGGCCCTGCCCGAATCCCGCGGCATGCCCTAGCCTGCATACCCTCCATAA CTCTTTCACAAGCCAGTCCA
Downstream 100 bases:
>100_bases GCGGCTGGCGGCTGCATCACCCGGCCGCACCGATTTGGCGCCGGTTCGCTCCGCAATGGTGCGACTGCCGGTACGATAGC CCCGGCGCCGCCCCGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPLSAVRSSSSSAPTALLRSADAEGRLAAQGRSAPAAAPLLRSLSSPHLSPLAERDREAGMRREAALAARFGSCQPARGK AKTGADGQVSHRSPIQKQELEPAQHGYRRVRVNPTRVLIAEHQGPETSTFFIRRQADLEAVRRVDRPAEAARTGAGPLQD LLRLDDLRAQRIQYKWDISANGSLVIGEVLVGAPESVREQVAAGLRKKAEDASRPPAAMKEKKQKKEKKEKKEKDATRNA DPDPRQFMLGHVTLVGGALIAEPWQATRGLPQAHISGTLYARPDGTLCIDNDSGRFSEYEDRVLAHLKSVADMFARLGLP VAVDWMPKAPIPLARPAPRAPG
Sequences:
>Translated_342_residues MPLSAVRSSSSSAPTALLRSADAEGRLAAQGRSAPAAAPLLRSLSSPHLSPLAERDREAGMRREAALAARFGSCQPARGK AKTGADGQVSHRSPIQKQELEPAQHGYRRVRVNPTRVLIAEHQGPETSTFFIRRQADLEAVRRVDRPAEAARTGAGPLQD LLRLDDLRAQRIQYKWDISANGSLVIGEVLVGAPESVREQVAAGLRKKAEDASRPPAAMKEKKQKKEKKEKKEKDATRNA DPDPRQFMLGHVTLVGGALIAEPWQATRGLPQAHISGTLYARPDGTLCIDNDSGRFSEYEDRVLAHLKSVADMFARLGLP VAVDWMPKAPIPLARPAPRAPG >Mature_341_residues PLSAVRSSSSSAPTALLRSADAEGRLAAQGRSAPAAAPLLRSLSSPHLSPLAERDREAGMRREAALAARFGSCQPARGKA KTGADGQVSHRSPIQKQELEPAQHGYRRVRVNPTRVLIAEHQGPETSTFFIRRQADLEAVRRVDRPAEAARTGAGPLQDL LRLDDLRAQRIQYKWDISANGSLVIGEVLVGAPESVREQVAAGLRKKAEDASRPPAAMKEKKQKKEKKEKKEKDATRNAD PDPRQFMLGHVTLVGGALIAEPWQATRGLPQAHISGTLYARPDGTLCIDNDSGRFSEYEDRVLAHLKSVADMFARLGLPV AVDWMPKAPIPLARPAPRAPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37081; Mature: 36949
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSAVRSSSSSAPTALLRSADAEGRLAAQGRSAPAAAPLLRSLSSPHLSPLAERDREAG CCCHHHHCCCCCCHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH MRREAALAARFGSCQPARGKAKTGADGQVSHRSPIQKQELEPAQHGYRRVRVNPTRVLIA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCEEEEECCEEEEEE EHQGPETSTFFIRRQADLEAVRRVDRPAEAARTGAGPLQDLLRLDDLRAQRIQYKWDISA CCCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECC NGSLVIGEVLVGAPESVREQVAAGLRKKAEDASRPPAAMKEKKQKKEKKEKKEKDATRNA CCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DPDPRQFMLGHVTLVGGALIAEPWQATRGLPQAHISGTLYARPDGTLCIDNDSGRFSEYE CCCHHHHHHHHHHHHCCHHHHCCHHHHCCCCCHHHCCEEEECCCCCEEEECCCCCCHHHH DRVLAHLKSVADMFARLGLPVAVDWMPKAPIPLARPAPRAPG HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSAVRSSSSSAPTALLRSADAEGRLAAQGRSAPAAAPLLRSLSSPHLSPLAERDREAG CCHHHHCCCCCCHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH MRREAALAARFGSCQPARGKAKTGADGQVSHRSPIQKQELEPAQHGYRRVRVNPTRVLIA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCEEEEECCEEEEEE EHQGPETSTFFIRRQADLEAVRRVDRPAEAARTGAGPLQDLLRLDDLRAQRIQYKWDISA CCCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECC NGSLVIGEVLVGAPESVREQVAAGLRKKAEDASRPPAAMKEKKQKKEKKEKKEKDATRNA CCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DPDPRQFMLGHVTLVGGALIAEPWQATRGLPQAHISGTLYARPDGTLCIDNDSGRFSEYE CCCHHHHHHHHHHHHCCHHHHCCHHHHCCCCCHHHCCEEEECCCCCEEEECCCCCCHHHH DRVLAHLKSVADMFARLGLPVAVDWMPKAPIPLARPAPRAPG HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA