| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is livK [C]
Identifier: 120611744
GI number: 120611744
Start: 3399792
End: 3400952
Strand: Reverse
Name: livK [C]
Synonym: Aave_3084
Alternate gene names: 120611744
Gene position: 3400952-3399792 (Counterclockwise)
Preceding gene: 120611745
Following gene: 120611743
Centisome position: 63.54
GC content: 67.7
Gene sequence:
>1161_bases GTGCCTTCCGTTTTCCGCTTCCTCCCCTCGCTGCCCCGTGCCGCGGCCGCTGCCGCCGTGCTGTCCGCCTTCGCCGTTGC GCCCGCGGGCGCGCAGGACGTGCAGACCGTCAAGATCGGCCATGCCGGCCCCGTCTCCGGTGGCATCGCGCACATCGGCA AGGACACCGAAAACGGCGTGCGCATGGCGGTGGACGACCTCAACGCGCAGAACCTCGTCATCGGCGGCAGGAAGATCCGC TTCGAGATCGCCGCGGAAGACGATGCCGGCGACCCGCGCCAGGCCACGGCCATCGCGCAGAAGTTCTGCGACCTGAAGGT GGCTGGCGTGGTCGGCCACCTGCAGTCGGGCACCTCCATCCCGGCGTCCTCGCTCTACGACAAGTGCGGCCTGCCCCACA TCACGGCCGCCGCCACCAACCCCGACCTGACCAAGCCGGGCTACAAGACCACGTTCCGCCTGATCGCCAACGACAGCGCC CTGGGCGCCGCCCTGGCCATCTACGCGGCCGACCACCTCAAGCTCAAGACCGTCGCCGTCATCGACGACCGCACGGCCTA CGGCCAGGGCGTGGCCCAGGTGTTCAAGGCCACGGCGATGCAGAAGGGCCTGAAGGTGGTGGCCGAGGAGTTCACCAACG ACAAGGCCACCGATTTCATGGCCATCCTGACCTCCATCAAGCCGAAGAAGCCCGATGCGGTCTTCTACGGCGGCCTCGAT GCCCAGGCCGGCCCGATGCTGCGCCAGATGGAGCAACTCGGCATGGGCGACGTGAAGTTCTTCGGCGGCGATGCGCTCTG CACCGAGAAACTGCCCGACCTGTCCGCCAAGTCGGCGGCACTCAAGAACGTGACCTGCGCCACCGGCGGCGCGTCCGTCG CCAAAATGCAGGGCGGCGCGGAGTGGAAGAAGCGCTACGACGCCAAGTTCCCCGGCCAGTTCCAGATCTACAGCCCCTAC GCCTACGACGCCACCATGGTGCTGGTGGACGCCATGAAGCGCGCCGACTCGGTGGATCCGAAGGTCTATACCCCCTTCAT CGCCAAGACCCAATACAAGGGCGTGACCGCCAACGTGTCCTTCACGCCCAAGGGCGAGCTGACGGCGCCCGCCGTGACGC TCTACCACTACCCGGCCAACGCGCGCGTCGCGCTGAACTGA
Upstream 100 bases:
>100_bases GTTCGCTCCGCAATGGTGCGACTGCCGGTACGATAGCCCCGGCGCCGCCCCGAGCGGGGCCTTTTTTTGCCATTCCCGAG ACTGTCAGGAGACCTCCGAA
Downstream 100 bases:
>100_bases GCCGGTGCTGCCTGACTCCGGCACGCCGCGGCATCGCCGCCGGCGGCGCCGGTTCCGATACAGTGGCGTGCCGCGCCCGG GTCTCCGGGCGCGGCACGCC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MPSVFRFLPSLPRAAAAAAVLSAFAVAPAGAQDVQTVKIGHAGPVSGGIAHIGKDTENGVRMAVDDLNAQNLVIGGRKIR FEIAAEDDAGDPRQATAIAQKFCDLKVAGVVGHLQSGTSIPASSLYDKCGLPHITAAATNPDLTKPGYKTTFRLIANDSA LGAALAIYAADHLKLKTVAVIDDRTAYGQGVAQVFKATAMQKGLKVVAEEFTNDKATDFMAILTSIKPKKPDAVFYGGLD AQAGPMLRQMEQLGMGDVKFFGGDALCTEKLPDLSAKSAALKNVTCATGGASVAKMQGGAEWKKRYDAKFPGQFQIYSPY AYDATMVLVDAMKRADSVDPKVYTPFIAKTQYKGVTANVSFTPKGELTAPAVTLYHYPANARVALN
Sequences:
>Translated_386_residues MPSVFRFLPSLPRAAAAAAVLSAFAVAPAGAQDVQTVKIGHAGPVSGGIAHIGKDTENGVRMAVDDLNAQNLVIGGRKIR FEIAAEDDAGDPRQATAIAQKFCDLKVAGVVGHLQSGTSIPASSLYDKCGLPHITAAATNPDLTKPGYKTTFRLIANDSA LGAALAIYAADHLKLKTVAVIDDRTAYGQGVAQVFKATAMQKGLKVVAEEFTNDKATDFMAILTSIKPKKPDAVFYGGLD AQAGPMLRQMEQLGMGDVKFFGGDALCTEKLPDLSAKSAALKNVTCATGGASVAKMQGGAEWKKRYDAKFPGQFQIYSPY AYDATMVLVDAMKRADSVDPKVYTPFIAKTQYKGVTANVSFTPKGELTAPAVTLYHYPANARVALN >Mature_385_residues PSVFRFLPSLPRAAAAAAVLSAFAVAPAGAQDVQTVKIGHAGPVSGGIAHIGKDTENGVRMAVDDLNAQNLVIGGRKIRF EIAAEDDAGDPRQATAIAQKFCDLKVAGVVGHLQSGTSIPASSLYDKCGLPHITAAATNPDLTKPGYKTTFRLIANDSAL GAALAIYAADHLKLKTVAVIDDRTAYGQGVAQVFKATAMQKGLKVVAEEFTNDKATDFMAILTSIKPKKPDAVFYGGLDA QAGPMLRQMEQLGMGDVKFFGGDALCTEKLPDLSAKSAALKNVTCATGGASVAKMQGGAEWKKRYDAKFPGQFQIYSPYA YDATMVLVDAMKRADSVDPKVYTPFIAKTQYKGVTANVSFTPKGELTAPAVTLYHYPANARVALN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=349, Percent_Identity=30.0859598853868, Blast_Score=137, Evalue=8e-34, Organism=Escherichia coli, GI48994941, Length=351, Percent_Identity=28.7749287749288, Blast_Score=128, Evalue=8e-31,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40638; Mature: 40507
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVFRFLPSLPRAAAAAAVLSAFAVAPAGAQDVQTVKIGHAGPVSGGIAHIGKDTENGV CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCC RMAVDDLNAQNLVIGGRKIRFEIAAEDDAGDPRQATAIAQKFCDLKVAGVVGHLQSGTSI EEEEECCCCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHCEEEEHHHHHHCCCCCC PASSLYDKCGLPHITAAATNPDLTKPGYKTTFRLIANDSALGAALAIYAADHLKLKTVAV CHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHEEEECCCEEEEEEEE IDDRTAYGQGVAQVFKATAMQKGLKVVAEEFTNDKATDFMAILTSIKPKKPDAVFYGGLD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCC AQAGPMLRQMEQLGMGDVKFFGGDALCTEKLPDLSAKSAALKNVTCATGGASVAKMQGGA CCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCHHHHHHCCCEEECCCCHHHHCCCCH EWKKRYDAKFPGQFQIYSPYAYDATMVLVDAMKRADSVDPKVYTPFIAKTQYKGVTANVS HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEECCHHHCEECCCEEEEEE FTPKGELTAPAVTLYHYPANARVALN ECCCCCCCCCEEEEEEECCCCEEEEC >Mature Secondary Structure PSVFRFLPSLPRAAAAAAVLSAFAVAPAGAQDVQTVKIGHAGPVSGGIAHIGKDTENGV CHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCC RMAVDDLNAQNLVIGGRKIRFEIAAEDDAGDPRQATAIAQKFCDLKVAGVVGHLQSGTSI EEEEECCCCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHCEEEEHHHHHHCCCCCC PASSLYDKCGLPHITAAATNPDLTKPGYKTTFRLIANDSALGAALAIYAADHLKLKTVAV CHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHEEEECCCEEEEEEEE IDDRTAYGQGVAQVFKATAMQKGLKVVAEEFTNDKATDFMAILTSIKPKKPDAVFYGGLD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCC AQAGPMLRQMEQLGMGDVKFFGGDALCTEKLPDLSAKSAALKNVTCATGGASVAKMQGGA CCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCHHHHHHCCCEEECCCCHHHHCCCCH EWKKRYDAKFPGQFQIYSPYAYDATMVLVDAMKRADSVDPKVYTPFIAKTQYKGVTANVS HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEECCHHHCEECCCEEEEEE FTPKGELTAPAVTLYHYPANARVALN ECCCCCCCCCEEEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA