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The map label for this gene is yeeY [H]

Identifier: 120611693

GI number: 120611693

Start: 3338591

End: 3339538

Strand: Direct

Name: yeeY [H]

Synonym: Aave_3030

Alternate gene names: 120611693

Gene position: 3338591-3339538 (Clockwise)

Preceding gene: 120611689

Following gene: 120611694

Centisome position: 62.37

GC content: 74.26

Gene sequence:

>948_bases
ATGCCGGTTCCTCCCCCCGCCCGCGACGCCCTCACGCCCGACAGCCTGGCCATGCTGCAGGTGATCGCGGAAACCGGCAG
CTTCGCCGCGGCGGCGCGGCAGCTCGGCGTGGTGCCCAGCGCGCTCACCTACCGGGTGCGGCAGATCGAAGAGGCGCTGG
ACGTGCTGCTGTTCGACCGCAGCGCCCGCCAGGCCCGGCCCACCGAGGCGGGCAGCGAACTGCTGCGCGAAGGCGCCCGC
CTGCTCGAGGAGGTGGAGGCCGTCGCGCACCGCGTGCGCCGGGTGGCGACCGGGTGGGAGCCCCAGCTCACCATCGCGGT
GGACGGGGTGATCTCCCCCACCACCCTGCTGGAACTCGTGGAGGCCTTCTATGCGCAGTCGCCCCCGACCCGGCTCAAGC
TGCGCGACGACATCCTCACTGGCACGCTCGAGGCCCTGACCTCCGGCAGGGCGGACCTGGCGCTGGGCGTGGCGGTGAAC
GCCACCAACGCCTCCGGCGTGCAGGGCAAGGTGATCGGCGACCTGCTGTTCCTCTTCACCGTGGCGCCGCACCATCCGCT
CGCCACCGCGCCCGGCCCGCTCACCGACACGGTGCTGCGCCAGCACCGGGCCATCGCCGTGGCCGACTCGGCGCAGCACG
GCGGCGTGACCATGGGCCTGCTGGGCGGGCAGGACGTGTTCACGGTGGACAGCATGCAGACCAAGCTGCAGGCCCAGTTG
CGCGGGCTGGGCGCCGGGTTTCTTCCGGAGCCCATGGTGCGGCCCTATGTCGAGGCCGGGCGGCTGGTCGTCCGCGAGGT
CGCGCGGCCCGCGCGCCGCGTGCGCCTGCACTATGCCTGGGGCGGCCCCGGGCATGCCCCGCCGGGCCGCGCCCTGGCGT
GGTGGCTGCAGCAGCTCGAGAGCCCCGCCACCCGCGCGGCGCTGCTGGAAAACCACCATCCGTTCTGA

Upstream 100 bases:

>100_bases
GGCGGGTGTCAGGCAGTGCTGGCACTTTAGAAGCCGCGTGCAACTTGCGGACGCAGTGCGATTGAAGGCATCATTCAAAA
CCTTTGAAGCTTTTTCCCCG

Downstream 100 bases:

>100_bases
GGCGCGCCGCGGCGTCTCGCACCCATGTATCCATGAAAGGCCGGACCATGACTTCTTCCCGCTCCCGTTCCCGCACGCCA
TCCCCAGGCGCTTCCGCCGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPVPPPARDALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDRSARQARPTEAGSELLREGAR
LLEEVEAVAHRVRRVATGWEPQLTIAVDGVISPTTLLELVEAFYAQSPPTRLKLRDDILTGTLEALTSGRADLALGVAVN
ATNASGVQGKVIGDLLFLFTVAPHHPLATAPGPLTDTVLRQHRAIAVADSAQHGGVTMGLLGGQDVFTVDSMQTKLQAQL
RGLGAGFLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLESPATRAALLENHHPF

Sequences:

>Translated_315_residues
MPVPPPARDALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDRSARQARPTEAGSELLREGAR
LLEEVEAVAHRVRRVATGWEPQLTIAVDGVISPTTLLELVEAFYAQSPPTRLKLRDDILTGTLEALTSGRADLALGVAVN
ATNASGVQGKVIGDLLFLFTVAPHHPLATAPGPLTDTVLRQHRAIAVADSAQHGGVTMGLLGGQDVFTVDSMQTKLQAQL
RGLGAGFLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLESPATRAALLENHHPF
>Mature_314_residues
PVPPPARDALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDRSARQARPTEAGSELLREGARL
LEEVEAVAHRVRRVATGWEPQLTIAVDGVISPTTLLELVEAFYAQSPPTRLKLRDDILTGTLEALTSGRADLALGVAVNA
TNASGVQGKVIGDLLFLFTVAPHHPLATAPGPLTDTVLRQHRAIAVADSAQHGGVTMGLLGGQDVFTVDSMQTKLQAQLR
GLGAGFLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLESPATRAALLENHHPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=287, Percent_Identity=36.5853658536585, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1789492, Length=291, Percent_Identity=34.7079037800687, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1786508, Length=291, Percent_Identity=30.5841924398625, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1787949, Length=296, Percent_Identity=32.0945945945946, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786713, Length=278, Percent_Identity=30.2158273381295, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI157672245, Length=167, Percent_Identity=33.5329341317365, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693105, Length=178, Percent_Identity=24.7191011235955, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33770; Mature: 33639

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPPPARDALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDR
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
SARQARPTEAGSELLREGARLLEEVEAVAHRVRRVATGWEPQLTIAVDGVISPTTLLELV
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
EAFYAQSPPTRLKLRDDILTGTLEALTSGRADLALGVAVNATNASGVQGKVIGDLLFLFT
HHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
VAPHHPLATAPGPLTDTVLRQHRAIAVADSAQHGGVTMGLLGGQDVFTVDSMQTKLQAQL
HCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHH
RGLGAGFLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLE
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHC
SPATRAALLENHHPF
CHHHHHHHHHCCCCC
>Mature Secondary Structure 
PVPPPARDALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDR
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
SARQARPTEAGSELLREGARLLEEVEAVAHRVRRVATGWEPQLTIAVDGVISPTTLLELV
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
EAFYAQSPPTRLKLRDDILTGTLEALTSGRADLALGVAVNATNASGVQGKVIGDLLFLFT
HHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
VAPHHPLATAPGPLTDTVLRQHRAIAVADSAQHGGVTMGLLGGQDVFTVDSMQTKLQAQL
HCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHH
RGLGAGFLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLE
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHC
SPATRAALLENHHPF
CHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]