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The map label for this gene is qseC [H]

Identifier: 120611676

GI number: 120611676

Start: 3322734

End: 3324191

Strand: Direct

Name: qseC [H]

Synonym: Aave_3013

Alternate gene names: 120611676

Gene position: 3322734-3324191 (Clockwise)

Preceding gene: 120611675

Following gene: 120611677

Centisome position: 62.08

GC content: 71.67

Gene sequence:

>1458_bases
GTGAGCGGCGCAGCGGGCCGAGCGCAGTCGCTGCGGCGGCGCCTGCTGCTGGGCATCCTGGTGCCGGTGGCGCTGTTCAT
CGCCTACAACACGGCCAGCCTGTACCGCCAGACGCTGTCGGCCCTGCACACCGCCTACGACCGGACGCTGCTGGCGTCCG
CCAAATCGATCAGCGAGCAGATCGACGTGGCGGGCTACGACGGCAGCGCCCGGCTGCGCGCCACGGTGCCCTACTCCGCG
CTGGAAGCCTTCGAGGCGGACAACCAGAGCCGCATGTTCTACCGGGTCTCCGACCTGCAGGGCGGGCTGGTGTCGGGCTT
CGCCGAGCTGCCCTTCTGGCATGGGCGCATTCCCGCCCGGCCGCCCTATGCCGCGCTGGTGGACTTCTACGACGACGAGT
TCCGCGGCCAGCCGGTGCGCGTCGCCGTGCTGCTGCAGCCGGTCGCCAGCCACACCGGCCGGGGCATGGCGGTCATCCAG
GTCGCGGAGACGCTGGAGCTGCGCCGCACCCTCGCGCTGCAGATCCTGCAAACCACGCTGGCGCGGCAGGCGCTGCTCGC
GCTGGTCATCGCGCTCATCGTGGGTTTCGTGGTGCAGTCGGCGGTGCGGCCCGTGCGCCGGCTCAGCGAGCAATTGCAGA
CCCGTCCGGAGGAAGACCTGCGCCCCATCGCGGCCCCGGGCACGCCGCGCGAGCTGCAGCCGCTGGTGGACGCCATGAAC
CACGTCATGGGCCGCCTCGCGCACCTGCTGACGCACCAGAAGCGCTTCGTGCGCGACGCCTCCCACCAGTTGCGCACGCC
CCTGGCCGTGCTGAAGGTGCAGGTGCAGTCGGCGCTGCGCGGCGACGTGCCGCCCCAGCAGGCCCTGCACGAGATCCTCG
ACACCGTGGACCGGGCCACGCAGCTCGCCAACCAGATGCTGGCGCTCGCGAAAGTGGAGCAGTTGCGCCAGCAGAGCGCG
CCCCCCGTGACCCGCCTGGACGACGAGTTGCGCGCCATCGCGCTCGAGCTCTCGCCCCTGATCGCGCAGCGCGACCTGGA
TTTCGGCATCCATACCGATCCCGCGCCCGTGCAGGCCCACGAGTGGATGCTGCGCGAGCTGGCCCGCAACCTCCTGCACA
ACGCGATCCGGCACACGCCGGTTTCGGGGGTGCTGTCCGTGGAGCTGGTGACGGACGGGTGGCACGCGGCGCTGACGTTT
TCCGACAGCGGCCCGGGCATCGGCGCCGAACTCGCGCAGCGCCTGTTCCAGCCTTTTTCCGCGGGCGACGTGCGGACCGG
CTCCGGGCTGGGGCTGGCCATCTGCCAGGAAATCGTGCGGGCGCTGGGCGGGCAGATCGAACTGGCCAATCGCATGGAAG
GCAGCCGCGTGGCCGGACTCGATGCCGTGGTGAGACTGCCGCTGGCGCGGGACGGCCACGATCCTGGAGGCACGCAGCGC
AGGCAGCCGGTGCCGTGA

Upstream 100 bases:

>100_bases
CGCAAGAAGCTGGCCGGCACCGGGCTCACGCTCATGACGCTGCGCGGGCTGGGCTACCTGCTCAAGGCGGATGCATGAGC
GCCGCCCGGAGGGCGGCGCC

Downstream 100 bases:

>100_bases
TGGATACCCGCGGTGCACGGCTGGCAGCGCCCGCCTTGCGCCCCGCGACCTGCTCCGGAGCACCATCCCGAGGCACATGC
CCGCTCCGCCTCCACCGCCT

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSGAAGRAQSLRRRLLLGILVPVALFIAYNTASLYRQTLSALHTAYDRTLLASAKSISEQIDVAGYDGSARLRATVPYSA
LEAFEADNQSRMFYRVSDLQGGLVSGFAELPFWHGRIPARPPYAALVDFYDDEFRGQPVRVAVLLQPVASHTGRGMAVIQ
VAETLELRRTLALQILQTTLARQALLALVIALIVGFVVQSAVRPVRRLSEQLQTRPEEDLRPIAAPGTPRELQPLVDAMN
HVMGRLAHLLTHQKRFVRDASHQLRTPLAVLKVQVQSALRGDVPPQQALHEILDTVDRATQLANQMLALAKVEQLRQQSA
PPVTRLDDELRAIALELSPLIAQRDLDFGIHTDPAPVQAHEWMLRELARNLLHNAIRHTPVSGVLSVELVTDGWHAALTF
SDSGPGIGAELAQRLFQPFSAGDVRTGSGLGLAICQEIVRALGGQIELANRMEGSRVAGLDAVVRLPLARDGHDPGGTQR
RQPVP

Sequences:

>Translated_485_residues
MSGAAGRAQSLRRRLLLGILVPVALFIAYNTASLYRQTLSALHTAYDRTLLASAKSISEQIDVAGYDGSARLRATVPYSA
LEAFEADNQSRMFYRVSDLQGGLVSGFAELPFWHGRIPARPPYAALVDFYDDEFRGQPVRVAVLLQPVASHTGRGMAVIQ
VAETLELRRTLALQILQTTLARQALLALVIALIVGFVVQSAVRPVRRLSEQLQTRPEEDLRPIAAPGTPRELQPLVDAMN
HVMGRLAHLLTHQKRFVRDASHQLRTPLAVLKVQVQSALRGDVPPQQALHEILDTVDRATQLANQMLALAKVEQLRQQSA
PPVTRLDDELRAIALELSPLIAQRDLDFGIHTDPAPVQAHEWMLRELARNLLHNAIRHTPVSGVLSVELVTDGWHAALTF
SDSGPGIGAELAQRLFQPFSAGDVRTGSGLGLAICQEIVRALGGQIELANRMEGSRVAGLDAVVRLPLARDGHDPGGTQR
RQPVP
>Mature_484_residues
SGAAGRAQSLRRRLLLGILVPVALFIAYNTASLYRQTLSALHTAYDRTLLASAKSISEQIDVAGYDGSARLRATVPYSAL
EAFEADNQSRMFYRVSDLQGGLVSGFAELPFWHGRIPARPPYAALVDFYDDEFRGQPVRVAVLLQPVASHTGRGMAVIQV
AETLELRRTLALQILQTTLARQALLALVIALIVGFVVQSAVRPVRRLSEQLQTRPEEDLRPIAAPGTPRELQPLVDAMNH
VMGRLAHLLTHQKRFVRDASHQLRTPLAVLKVQVQSALRGDVPPQQALHEILDTVDRATQLANQMLALAKVEQLRQQSAP
PVTRLDDELRAIALELSPLIAQRDLDFGIHTDPAPVQAHEWMLRELARNLLHNAIRHTPVSGVLSVELVTDGWHAALTFS
DSGPGIGAELAQRLFQPFSAGDVRTGSGLGLAICQEIVRALGGQIELANRMEGSRVAGLDAVVRLPLARDGHDPGGTQRR
QPVP

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=458, Percent_Identity=28.1659388646288, Blast_Score=135, Evalue=8e-33,
Organism=Escherichia coli, GI1786783, Length=324, Percent_Identity=26.8518518518519, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1790551, Length=283, Percent_Identity=31.4487632508834, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788393, Length=279, Percent_Identity=30.8243727598566, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788279, Length=269, Percent_Identity=24.1635687732342, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790861, Length=281, Percent_Identity=25.9786476868327, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790346, Length=278, Percent_Identity=25.5395683453237, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786600, Length=203, Percent_Identity=32.0197044334975, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789808, Length=246, Percent_Identity=27.2357723577236, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI145693157, Length=225, Percent_Identity=26.2222222222222, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788549, Length=194, Percent_Identity=24.2268041237113, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786912, Length=202, Percent_Identity=27.7227722772277, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=27.1493212669683, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52987; Mature: 52856

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAAGRAQSLRRRLLLGILVPVALFIAYNTASLYRQTLSALHTAYDRTLLASAKSISEQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDVAGYDGSARLRATVPYSALEAFEADNQSRMFYRVSDLQGGLVSGFAELPFWHGRIPAR
HCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECHHCCHHHHHHHHCCCCCCCCCCC
PPYAALVDFYDDEFRGQPVRVAVLLQPVASHTGRGMAVIQVAETLELRRTLALQILQTTL
CCHHHHHHHHHHHHCCCCEEEHHEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ARQALLALVIALIVGFVVQSAVRPVRRLSEQLQTRPEEDLRPIAAPGTPRELQPLVDAMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHH
HVMGRLAHLLTHQKRFVRDASHQLRTPLAVLKVQVQSALRGDVPPQQALHEILDTVDRAT
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QLANQMLALAKVEQLRQQSAPPVTRLDDELRAIALELSPLIAQRDLDFGIHTDPAPVQAH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
EWMLRELARNLLHNAIRHTPVSGVLSVELVTDGWHAALTFSDSGPGIGAELAQRLFQPFS
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCC
AGDVRTGSGLGLAICQEIVRALGGQIELANRMEGSRVAGLDAVVRLPLARDGHDPGGTQR
CCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHCCCCHHHCHHHHHHCCCCCCCCCCCCCCC
RQPVP
CCCCC
>Mature Secondary Structure 
SGAAGRAQSLRRRLLLGILVPVALFIAYNTASLYRQTLSALHTAYDRTLLASAKSISEQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDVAGYDGSARLRATVPYSALEAFEADNQSRMFYRVSDLQGGLVSGFAELPFWHGRIPAR
HCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECHHCCHHHHHHHHCCCCCCCCCCC
PPYAALVDFYDDEFRGQPVRVAVLLQPVASHTGRGMAVIQVAETLELRRTLALQILQTTL
CCHHHHHHHHHHHHCCCCEEEHHEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ARQALLALVIALIVGFVVQSAVRPVRRLSEQLQTRPEEDLRPIAAPGTPRELQPLVDAMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHH
HVMGRLAHLLTHQKRFVRDASHQLRTPLAVLKVQVQSALRGDVPPQQALHEILDTVDRAT
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QLANQMLALAKVEQLRQQSAPPVTRLDDELRAIALELSPLIAQRDLDFGIHTDPAPVQAH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
EWMLRELARNLLHNAIRHTPVSGVLSVELVTDGWHAALTFSDSGPGIGAELAQRLFQPFS
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCC
AGDVRTGSGLGLAICQEIVRALGGQIELANRMEGSRVAGLDAVVRLPLARDGHDPGGTQR
CCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHCCCCHHHCHHHHHHCCCCCCCCCCCCCCC
RQPVP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]