| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is zraS [C]
Identifier: 120611639
GI number: 120611639
Start: 3266553
End: 3269222
Strand: Direct
Name: zraS [C]
Synonym: Aave_2976
Alternate gene names: 120611639
Gene position: 3266553-3269222 (Clockwise)
Preceding gene: 120611638
Following gene: 120611640
Centisome position: 61.03
GC content: 70.0
Gene sequence:
>2670_bases ATGACGATCCCACCGACCCCGCCCGCCGAGCGCCATGCCGACATCTTCATCGGCCAGAGCGAGATGGCACGGCGCATGCG CCAGCACGACTGGGAAGCGACGCCGCTCGGGCCGCCCGAACGCTGGCCCCAGGGGCTCAAGGCCGCGCTGCGCATCCTGC TGACCTCCCGCTTCGAAATGTGGGTGGGCTGGGGCCCGGACATCGCTTTCTTCTACAACGACGCCTACCGCCCCACGCTG GGCACCAAGCATCCCCAAGCGCTGGGCCGGCCCACTTCGCAGATCTGGGCAGAAATCTGGGACGACGTGAAGGACCGGAT GCACGCGGTGTACCAGCGTGGCGAATCCACCTGGGATTCCTCCCTGATGCTGCTCATCGACCGTGCAGGAACGGGCACCC TCGAGGAGACCTACCACACCTTCTCGTACAGCCCGCTGCTGGACGACGACGGGCGCGTGAACGGCCTGTTCTGCGCGGTG TCCGAAGAGACGCGCCGCGTCATCAGCGAGCGGCGCCTGGCGGTGCTGCACGAACTGAGCGCGGCGATGTCGCTGGGCGG CACCCGCCAGCAGGTCGTGGACGGCGCCTGCGCCACCCTGGCGAACGCGCAGCACGACCTGCCCTTCTCGCTGATCTATC TCCACGATGCCCACGGCACGGCGCGGCTGGCCTGCAATGCCGGCGTGCCCTCGGGCCACCGGCTGGCGCCGCGCGAAATC GCGCCCGGCGCGCCGTGGCCCTGGCGCCTGGACCGGCTCGCGGCCGGCGAGGCCGCATTCGCAGTCCCACTGGAGCCGGC GGCCGACACGCCCACCGGCGCGTGGCAGGTTCCGCCACACACCGCGTTCGTGGTGGCGCTGCCCCCGCAAGGGGACGCCC GGTCCGCGGGCTTCCTCGTGTGCGGTGCGAATCCGCACCGCCCCGGGGACGACGCCGAGACCCGGTCGTTCGTGCAACTG CTCGCCGGGCAGGTGGCGCCGGCCGTCGCGCAGGCCGAGGCGCTGGAATCCCGCACGGCCGAGCGCGACCGCCTGCGCGA ACTGTTCAGCAAGGCGCCGGGCTTCATGTGCGTGCTGCGCGGGCCCGACCACGTTTTCGAGTTCGTCAACGATTCATACC AGCAGCTCATCGGCCGCAGGGACCTCGAAGGCAAGTCCATCCGCGACGCCATGCCGGAACTGCAGGGCCAGGGCATCCAC GAACTGCTCGACGAGGTGTACCGCACCGGCAGGCCCTACATCGGCAAGAACCTCAAGGTCATGCTGCAGCGCGATCCCGG CGGTCCGCTGACCGAGCACTACCTGAACTTCATCTACCAGCCCACGCTGGACGGCACGGGGGCGGTGAACGGCATCTTCG CCGAAGGCTACGACGTGACCGACCAGCGCGTCGCGGAACAGGAACTGCGCGCCCTCAACAGCCACCTGGAAAGCCGGGTG GCCGAGCGCACCCGCGACCTGGAGGACGCTCTGGCGCGCCTCACCGCGGAATCCCGCGAGCGCGAGGCCGCCCAGGAGGC GCTGCGGCAGTCGCAGAAGATGGAAGCCGTAGGCCAGCTCACCGGCGGTCTCGCGCATGATTTCAACAATCTGCTGGCCA CCATCAGCGGCAGCCTCGAGTTGCTCAACCGGCGCGTGGCACAGGGGCGCTTCGACGACCTCGCCCGCTACGTGGCGGTC GGCCAGGGGGCCGCGCGGCGCGCCGCCTCCCTCACCCACCGCATGCTGGCCTTCTCGCGGCGGCAGACGCTCGACCCCAA GCCCACCGATGTGAACCGTCTGGTGCGCGGCATGGAGGAGCTCATCCGGCGCACCATCGGCCCCGAGACCGAACTGGAGG TCGTGAACGCGGTGGGCCTGTGGACCACCCATGTGGACCCCCACCAGCTCGAAAGCGCTCTCCTGAACCTGTGCATCAAT TCCCGCGATGCCATGCCCGGCGGCGGCCGGCTCACCATAGAGACCGCCAATGCCTGGATGGACGAGCGCGCCGGACGCGA GCGCGACCTTCCGCCGGGCCAGTACGTGTCGCTGTGCGTGACCGATACCGGCACGGGCATGGCACCCGAGGTGATGCGCC GGATCTTCGAGCCCTTCTTCACCACCAAGCCGATCGGCATGGGCACGGGCCTGGGCCTTTCGATGGTGTACGGGTTCGCC CGGCAATCCGGCGGGCAGGTGCGCGCTTATTCCGAGCCCGGCATGGGCACGACGATGTGCATCTACCTGCCCCGCCACGA AGCGCCGCCCGAGGATTCCGACCTGCCGGCCCTGCAGCCCGCGGAGGCCGGCGAGGGATCGGGCACGGTGCTCGTGGTGG ACGACGAGCCCAGCGTGCGCGCCCTGGTGGTGGAGGTGCTGCACGAAATGGGCTACCAGACCATCGAGGCGCACGACGGC CCCTCCGCACTGCAGGTGCTGCAATCGCGCACCCACCTGGATCTGCTGATCACCGACGTCGGCCTGCCCGGCGGCATGAA CGGGCGCCAGCTCGCCGATGGCGGGCGCCTCACGCGGCCCGACCTGCAGATCCTCTTCATCACCGGCTATGCCGAGAACG CGGCCGTGGGCAACGGCCATCTGGAGCGGGGCATGCACGTGCTGACCAAGCCCTTCACGCTCGATGCGCTGGCCCACCGC GTGCGCACCCTCATCCCGCAACCGTCATGA
Upstream 100 bases:
>100_bases CGCACACCTGGGCAAGCCCCTGCAGCCCCATGCCCTGATGGCCACGATCGCGCGCCTGATGGCCGCCCGCCCGGCCTAGA CACCGACGTCCCCTGACGCC
Downstream 100 bases:
>100_bases GGCCTGCCGTGCTCCGTCCTCCTGGCCCGCCCGGCGACGCCATCCACGCGCAGGGCGGGCCCGCGGCCGACTGCCTGGGC GCCCTGCGGGACGCCACGCG
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 889; Mature: 888
Protein sequence:
>889_residues MTIPPTPPAERHADIFIGQSEMARRMRQHDWEATPLGPPERWPQGLKAALRILLTSRFEMWVGWGPDIAFFYNDAYRPTL GTKHPQALGRPTSQIWAEIWDDVKDRMHAVYQRGESTWDSSLMLLIDRAGTGTLEETYHTFSYSPLLDDDGRVNGLFCAV SEETRRVISERRLAVLHELSAAMSLGGTRQQVVDGACATLANAQHDLPFSLIYLHDAHGTARLACNAGVPSGHRLAPREI APGAPWPWRLDRLAAGEAAFAVPLEPAADTPTGAWQVPPHTAFVVALPPQGDARSAGFLVCGANPHRPGDDAETRSFVQL LAGQVAPAVAQAEALESRTAERDRLRELFSKAPGFMCVLRGPDHVFEFVNDSYQQLIGRRDLEGKSIRDAMPELQGQGIH ELLDEVYRTGRPYIGKNLKVMLQRDPGGPLTEHYLNFIYQPTLDGTGAVNGIFAEGYDVTDQRVAEQELRALNSHLESRV AERTRDLEDALARLTAESREREAAQEALRQSQKMEAVGQLTGGLAHDFNNLLATISGSLELLNRRVAQGRFDDLARYVAV GQGAARRAASLTHRMLAFSRRQTLDPKPTDVNRLVRGMEELIRRTIGPETELEVVNAVGLWTTHVDPHQLESALLNLCIN SRDAMPGGGRLTIETANAWMDERAGRERDLPPGQYVSLCVTDTGTGMAPEVMRRIFEPFFTTKPIGMGTGLGLSMVYGFA RQSGGQVRAYSEPGMGTTMCIYLPRHEAPPEDSDLPALQPAEAGEGSGTVLVVDDEPSVRALVVEVLHEMGYQTIEAHDG PSALQVLQSRTHLDLLITDVGLPGGMNGRQLADGGRLTRPDLQILFITGYAENAAVGNGHLERGMHVLTKPFTLDALAHR VRTLIPQPS
Sequences:
>Translated_889_residues MTIPPTPPAERHADIFIGQSEMARRMRQHDWEATPLGPPERWPQGLKAALRILLTSRFEMWVGWGPDIAFFYNDAYRPTL GTKHPQALGRPTSQIWAEIWDDVKDRMHAVYQRGESTWDSSLMLLIDRAGTGTLEETYHTFSYSPLLDDDGRVNGLFCAV SEETRRVISERRLAVLHELSAAMSLGGTRQQVVDGACATLANAQHDLPFSLIYLHDAHGTARLACNAGVPSGHRLAPREI APGAPWPWRLDRLAAGEAAFAVPLEPAADTPTGAWQVPPHTAFVVALPPQGDARSAGFLVCGANPHRPGDDAETRSFVQL LAGQVAPAVAQAEALESRTAERDRLRELFSKAPGFMCVLRGPDHVFEFVNDSYQQLIGRRDLEGKSIRDAMPELQGQGIH ELLDEVYRTGRPYIGKNLKVMLQRDPGGPLTEHYLNFIYQPTLDGTGAVNGIFAEGYDVTDQRVAEQELRALNSHLESRV AERTRDLEDALARLTAESREREAAQEALRQSQKMEAVGQLTGGLAHDFNNLLATISGSLELLNRRVAQGRFDDLARYVAV GQGAARRAASLTHRMLAFSRRQTLDPKPTDVNRLVRGMEELIRRTIGPETELEVVNAVGLWTTHVDPHQLESALLNLCIN SRDAMPGGGRLTIETANAWMDERAGRERDLPPGQYVSLCVTDTGTGMAPEVMRRIFEPFFTTKPIGMGTGLGLSMVYGFA RQSGGQVRAYSEPGMGTTMCIYLPRHEAPPEDSDLPALQPAEAGEGSGTVLVVDDEPSVRALVVEVLHEMGYQTIEAHDG PSALQVLQSRTHLDLLITDVGLPGGMNGRQLADGGRLTRPDLQILFITGYAENAAVGNGHLERGMHVLTKPFTLDALAHR VRTLIPQPS >Mature_888_residues TIPPTPPAERHADIFIGQSEMARRMRQHDWEATPLGPPERWPQGLKAALRILLTSRFEMWVGWGPDIAFFYNDAYRPTLG TKHPQALGRPTSQIWAEIWDDVKDRMHAVYQRGESTWDSSLMLLIDRAGTGTLEETYHTFSYSPLLDDDGRVNGLFCAVS EETRRVISERRLAVLHELSAAMSLGGTRQQVVDGACATLANAQHDLPFSLIYLHDAHGTARLACNAGVPSGHRLAPREIA PGAPWPWRLDRLAAGEAAFAVPLEPAADTPTGAWQVPPHTAFVVALPPQGDARSAGFLVCGANPHRPGDDAETRSFVQLL AGQVAPAVAQAEALESRTAERDRLRELFSKAPGFMCVLRGPDHVFEFVNDSYQQLIGRRDLEGKSIRDAMPELQGQGIHE LLDEVYRTGRPYIGKNLKVMLQRDPGGPLTEHYLNFIYQPTLDGTGAVNGIFAEGYDVTDQRVAEQELRALNSHLESRVA ERTRDLEDALARLTAESREREAAQEALRQSQKMEAVGQLTGGLAHDFNNLLATISGSLELLNRRVAQGRFDDLARYVAVG QGAARRAASLTHRMLAFSRRQTLDPKPTDVNRLVRGMEELIRRTIGPETELEVVNAVGLWTTHVDPHQLESALLNLCINS RDAMPGGGRLTIETANAWMDERAGRERDLPPGQYVSLCVTDTGTGMAPEVMRRIFEPFFTTKPIGMGTGLGLSMVYGFAR QSGGQVRAYSEPGMGTTMCIYLPRHEAPPEDSDLPALQPAEAGEGSGTVLVVDDEPSVRALVVEVLHEMGYQTIEAHDGP SALQVLQSRTHLDLLITDVGLPGGMNGRQLADGGRLTRPDLQILFITGYAENAAVGNGHLERGMHVLTKPFTLDALAHRV RTLIPQPS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=29.0322580645161, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1788713, Length=426, Percent_Identity=26.056338028169, Blast_Score=91, Evalue=5e-19, Organism=Escherichia coli, GI1788549, Length=246, Percent_Identity=26.8292682926829, Blast_Score=90, Evalue=7e-19, Organism=Escherichia coli, GI145693157, Length=155, Percent_Identity=36.1290322580645, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790300, Length=280, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI87081816, Length=156, Percent_Identity=29.4871794871795, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 97578; Mature: 97446
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPPTPPAERHADIFIGQSEMARRMRQHDWEATPLGPPERWPQGLKAALRILLTSRFEM CCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE WVGWGPDIAFFYNDAYRPTLGTKHPQALGRPTSQIWAEIWDDVKDRMHAVYQRGESTWDS EECCCCCEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SLMLLIDRAGTGTLEETYHTFSYSPLLDDDGRVNGLFCAVSEETRRVISERRLAVLHELS CEEEEEECCCCCCHHHHHHHEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHH AAMSLGGTRQQVVDGACATLANAQHDLPFSLIYLHDAHGTARLACNAGVPSGHRLAPREI HHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHC APGAPWPWRLDRLAAGEAAFAVPLEPAADTPTGAWQVPPHTAFVVALPPQGDARSAGFLV CCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCEEE CGANPHRPGDDAETRSFVQLLAGQVAPAVAQAEALESRTAERDRLRELFSKAPGFMCVLR ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GPDHVFEFVNDSYQQLIGRRDLEGKSIRDAMPELQGQGIHELLDEVYRTGRPYIGKNLKV CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEE MLQRDPGGPLTEHYLNFIYQPTLDGTGAVNGIFAEGYDVTDQRVAEQELRALNSHLESRV EEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH AERTRDLEDALARLTAESREREAAQEALRQSQKMEAVGQLTGGLAHDFNNLLATISGSLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNRRVAQGRFDDLARYVAVGQGAARRAASLTHRMLAFSRRQTLDPKPTDVNRLVRGMEE HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LIRRTIGPETELEVVNAVGLWTTHVDPHQLESALLNLCINSRDAMPGGGRLTIETANAWM HHHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHH DERAGRERDLPPGQYVSLCVTDTGTGMAPEVMRRIFEPFFTTKPIGMGTGLGLSMVYGFA HHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH RQSGGQVRAYSEPGMGTTMCIYLPRHEAPPEDSDLPALQPAEAGEGSGTVLVVDDEPSVR HCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH ALVVEVLHEMGYQTIEAHDGPSALQVLQSRTHLDLLITDVGLPGGMNGRQLADGGRLTRP HHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCCCCC DLQILFITGYAENAAVGNGHLERGMHVLTKPFTLDALAHRVRTLIPQPS CEEEEEEECCCCCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TIPPTPPAERHADIFIGQSEMARRMRQHDWEATPLGPPERWPQGLKAALRILLTSRFEM CCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE WVGWGPDIAFFYNDAYRPTLGTKHPQALGRPTSQIWAEIWDDVKDRMHAVYQRGESTWDS EECCCCCEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SLMLLIDRAGTGTLEETYHTFSYSPLLDDDGRVNGLFCAVSEETRRVISERRLAVLHELS CEEEEEECCCCCCHHHHHHHEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHH AAMSLGGTRQQVVDGACATLANAQHDLPFSLIYLHDAHGTARLACNAGVPSGHRLAPREI HHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHC APGAPWPWRLDRLAAGEAAFAVPLEPAADTPTGAWQVPPHTAFVVALPPQGDARSAGFLV CCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCEEE CGANPHRPGDDAETRSFVQLLAGQVAPAVAQAEALESRTAERDRLRELFSKAPGFMCVLR ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GPDHVFEFVNDSYQQLIGRRDLEGKSIRDAMPELQGQGIHELLDEVYRTGRPYIGKNLKV CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEE MLQRDPGGPLTEHYLNFIYQPTLDGTGAVNGIFAEGYDVTDQRVAEQELRALNSHLESRV EEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH AERTRDLEDALARLTAESREREAAQEALRQSQKMEAVGQLTGGLAHDFNNLLATISGSLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNRRVAQGRFDDLARYVAVGQGAARRAASLTHRMLAFSRRQTLDPKPTDVNRLVRGMEE HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LIRRTIGPETELEVVNAVGLWTTHVDPHQLESALLNLCINSRDAMPGGGRLTIETANAWM HHHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHH DERAGRERDLPPGQYVSLCVTDTGTGMAPEVMRRIFEPFFTTKPIGMGTGLGLSMVYGFA HHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH RQSGGQVRAYSEPGMGTTMCIYLPRHEAPPEDSDLPALQPAEAGEGSGTVLVVDDEPSVR HCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH ALVVEVLHEMGYQTIEAHDGPSALQVLQSRTHLDLLITDVGLPGGMNGRQLADGGRLTRP HHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCCCCC DLQILFITGYAENAAVGNGHLERGMHVLTKPFTLDALAHRVRTLIPQPS CEEEEEEECCCCCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA