| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611577
Identifier: 120611577
GI number: 120611577
Start: 3207293
End: 3207568
Strand: Direct
Name: 120611577
Synonym: Aave_2913
Alternate gene names: NA
Gene position: 3207293-3207568 (Clockwise)
Preceding gene: 120611576
Following gene: 120611578
Centisome position: 59.92
GC content: 64.49
Gene sequence:
>276_bases ATGAGCAACGACCAATCCCGCCGCGCGATGTCTGATGCCGAGAAGGTCGAGGCCGTCGAAGCGCTCTCGAAGCAACTGCT GTCCTGCGCTCTGCAGGCGACCAATGCAGGGGTGGCTCTCGACGCGCTCGTGACCGCCTACATCAACTGCGCCTCCCACC TGGGGCTGCTCGATCAGGTTCCTGTCGCAGCTGCCGCAATGAGCGAAGCATCCATCCACATCCTCAACGTGCAGCGCCAG CTCGGCCAGGGGCGCATGGGCACGGCCATCCACTGA
Upstream 100 bases:
>100_bases ACCGGCCCACGCCGACCAACTTCCGAGACGGCGCCCTGGACCACCAGCGCCATCCCAGCCTGATCGGAGACAGGCGTTTC ACCCACAGGAGCCCGAAAGC
Downstream 100 bases:
>100_bases AAGGACTTTTCCATGACCGAAGACACCATCACCATCCCCAAGGGCTACTGGGCCGACGCCGAAGGCGCGCTCATCCCCGT CTCGAAGATCAAGGACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSNDQSRRAMSDAEKVEAVEALSKQLLSCALQATNAGVALDALVTAYINCASHLGLLDQVPVAAAAMSEASIHILNVQRQ LGQGRMGTAIH
Sequences:
>Translated_91_residues MSNDQSRRAMSDAEKVEAVEALSKQLLSCALQATNAGVALDALVTAYINCASHLGLLDQVPVAAAAMSEASIHILNVQRQ LGQGRMGTAIH >Mature_90_residues SNDQSRRAMSDAEKVEAVEALSKQLLSCALQATNAGVALDALVTAYINCASHLGLLDQVPVAAAAMSEASIHILNVQRQL GQGRMGTAIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9517; Mature: 9386
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDQSRRAMSDAEKVEAVEALSKQLLSCALQATNAGVALDALVTAYINCASHLGLLDQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH PVAAAAMSEASIHILNVQRQLGQGRMGTAIH HHHHHHHHHCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SNDQSRRAMSDAEKVEAVEALSKQLLSCALQATNAGVALDALVTAYINCASHLGLLDQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH PVAAAAMSEASIHILNVQRQLGQGRMGTAIH HHHHHHHHHCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA