| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611576
Identifier: 120611576
GI number: 120611576
Start: 3206874
End: 3207296
Strand: Direct
Name: 120611576
Synonym: Aave_2912
Alternate gene names: NA
Gene position: 3206874-3207296 (Clockwise)
Preceding gene: 120611575
Following gene: 120611577
Centisome position: 59.91
GC content: 68.09
Gene sequence:
>423_bases ATGTCTAAGGGACTCACCCGCGATACGGCGCAGCTCTGGAACTTCCTGCGCGCCGACAAGGGCTGGTGGAGCGTGCTGCG CCTGACCGGCCACTGGGCGCCTACGTTCACCGAGCGCGAGATCGAGGAGCACATGGAGACGCTGTCCCGCGGCGTCTTCG TGGTCTCCAAATACACCGAGCGCATGGGCACCGTCTATGCCGTCACCCCGGACTGCCGCCTGCTGCCAGGCACGGATGCA CCCGCCCCGATGCCGCAGCCGCCCAGCACCGACATCGAGCTGGCGCCCCCTCCGCGCCGCGACGCGATGAGCACGTTCTA CCGGCCCACGCCGACCAACTTCCGAGACGGCGCCCTGGACCACCAGCGCCATCCCAGCCTGATCGGAGACAGGCGTTTCA CCCACAGGAGCCCGAAAGCATGA
Upstream 100 bases:
>100_bases GTGTCCCGCCGCCTGGCGATCTTCGACGCGCGACGCGACTACTGCGACTTCGTCGGCCTGAGCCACAAGCACCTGCTGCA GCTCTTTCGAGGAGGCACCC
Downstream 100 bases:
>100_bases GCAACGACCAATCCCGCCGCGCGATGTCTGATGCCGAGAAGGTCGAGGCCGTCGAAGCGCTCTCGAAGCAACTGCTGTCC TGCGCTCTGCAGGCGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSKGLTRDTAQLWNFLRADKGWWSVLRLTGHWAPTFTEREIEEHMETLSRGVFVVSKYTERMGTVYAVTPDCRLLPGTDA PAPMPQPPSTDIELAPPPRRDAMSTFYRPTPTNFRDGALDHQRHPSLIGDRRFTHRSPKA
Sequences:
>Translated_140_residues MSKGLTRDTAQLWNFLRADKGWWSVLRLTGHWAPTFTEREIEEHMETLSRGVFVVSKYTERMGTVYAVTPDCRLLPGTDA PAPMPQPPSTDIELAPPPRRDAMSTFYRPTPTNFRDGALDHQRHPSLIGDRRFTHRSPKA >Mature_139_residues SKGLTRDTAQLWNFLRADKGWWSVLRLTGHWAPTFTEREIEEHMETLSRGVFVVSKYTERMGTVYAVTPDCRLLPGTDAP APMPQPPSTDIELAPPPRRDAMSTFYRPTPTNFRDGALDHQRHPSLIGDRRFTHRSPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16004; Mature: 15873
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGLTRDTAQLWNFLRADKGWWSVLRLTGHWAPTFTEREIEEHMETLSRGVFVVSKYTE CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEHHHHHHH RMGTVYAVTPDCRLLPGTDAPAPMPQPPSTDIELAPPPRRDAMSTFYRPTPTNFRDGALD HHCEEEEECCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCC HQRHPSLIGDRRFTHRSPKA CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKGLTRDTAQLWNFLRADKGWWSVLRLTGHWAPTFTEREIEEHMETLSRGVFVVSKYTE CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEHHHHHHH RMGTVYAVTPDCRLLPGTDAPAPMPQPPSTDIELAPPPRRDAMSTFYRPTPTNFRDGALD HHCEEEEECCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCC HQRHPSLIGDRRFTHRSPKA CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA