| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611533
Identifier: 120611533
GI number: 120611533
Start: 3160032
End: 3160988
Strand: Reverse
Name: 120611533
Synonym: Aave_2869
Alternate gene names: NA
Gene position: 3160988-3160032 (Counterclockwise)
Preceding gene: 120611534
Following gene: 120611532
Centisome position: 59.05
GC content: 69.59
Gene sequence:
>957_bases ATGGCCTCGTCCCTGCCCGAACCCATCCTGCACCACTATCCCTCGTCGCCGTTCTCGGAAAAGATGCGGCTCGCCCTCGG CTTCAAGCAGCTGGCCTGGAAGTCGGTGATCGTCCCGAGCATCGCGCCCAAGCCCGACGTGGTGGCGCTCACGGGCGGAT ACCGCCGCACGCCGTTCCTGCAGATCGGCGCCGACATCTATTGCGACACGGCCCTGATCTGCGACGTGCTGGAACACCTG CAGCCCGAGCCGGTGCTGTATCCCCTGGCCCTCAAGGGCGTGTCCCGCGTTTTCGCCCAGTGGTCGGATACGCCCCTGTT CTGGGCCGCCATGGCCTACAACCTCCAGCCGCGGGGCGCGGCCGAGCTGTTCGCCAACCTCCCGCCCACGGCCGCGCAGG CCTTCGGCGCCGACCGCAAGGCCATGAGCGCCGGCATGAACCGCCTGCGCCCCCAGGACGCCACGGCCGCCTACCGCTCC TACCTGCGGCGCATCGCCCACATGGTCGAGGAGCACGACTACCTCTTCGGCGCGGAGCCGTGCGTGGCCGACTTCGCCGC CTACCACCCGCTGTGGTTCACCCGGCAGTGCGTGCCGGTGATGGCCGACATCTTCAAGGCCACCCCCGCCGTGCTCGAGT GGATGGACCGCATCGCCGCCATCGGCCATGGACGCATGGAGAAATTCGGCACCCAGGATGCCATCACGGTGGCCGCCGGG GCCGAGCCGCTACCGCTCGTGGACGACGTCTTCCAGGACGAGCACGGCATACCGCTGGGCGCGCGCGTGTCGATCGCCGC GGAGAGCTTCGGCACCGAACCGACCGAAGGCCGCCTCGTCGCCGCCACCCGCACGCGCTACACGCTGGCACGCACCGACC CGCGCGCGGGCACGCTCCACGTGCATTTCCCGCGCATCGGCTACACGCTCACTTCCACGGAGACAACCACACCATGA
Upstream 100 bases:
>100_bases GAATACCTGGAGGACGGCATCCCCCACGTCGAGATGCTGTGGACGCCGACCTCCGCTCCGGCGTAACCTGCGCCTGCCCG GAAACCCACCAGGAGAAGCC
Downstream 100 bases:
>100_bases TCGAAGACTTCCAGGGCAAGACCGCCGTGCTCACCGGCGCGGGATCGGGATTCGGACTCGAATGCGCCCGCATCGGCGCG CGGCGCGGCATGCGCCTCGT
Product: putative glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase-Related Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MASSLPEPILHHYPSSPFSEKMRLALGFKQLAWKSVIVPSIAPKPDVVALTGGYRRTPFLQIGADIYCDTALICDVLEHL QPEPVLYPLALKGVSRVFAQWSDTPLFWAAMAYNLQPRGAAELFANLPPTAAQAFGADRKAMSAGMNRLRPQDATAAYRS YLRRIAHMVEEHDYLFGAEPCVADFAAYHPLWFTRQCVPVMADIFKATPAVLEWMDRIAAIGHGRMEKFGTQDAITVAAG AEPLPLVDDVFQDEHGIPLGARVSIAAESFGTEPTEGRLVAATRTRYTLARTDPRAGTLHVHFPRIGYTLTSTETTTP
Sequences:
>Translated_318_residues MASSLPEPILHHYPSSPFSEKMRLALGFKQLAWKSVIVPSIAPKPDVVALTGGYRRTPFLQIGADIYCDTALICDVLEHL QPEPVLYPLALKGVSRVFAQWSDTPLFWAAMAYNLQPRGAAELFANLPPTAAQAFGADRKAMSAGMNRLRPQDATAAYRS YLRRIAHMVEEHDYLFGAEPCVADFAAYHPLWFTRQCVPVMADIFKATPAVLEWMDRIAAIGHGRMEKFGTQDAITVAAG AEPLPLVDDVFQDEHGIPLGARVSIAAESFGTEPTEGRLVAATRTRYTLARTDPRAGTLHVHFPRIGYTLTSTETTTP >Mature_317_residues ASSLPEPILHHYPSSPFSEKMRLALGFKQLAWKSVIVPSIAPKPDVVALTGGYRRTPFLQIGADIYCDTALICDVLEHLQ PEPVLYPLALKGVSRVFAQWSDTPLFWAAMAYNLQPRGAAELFANLPPTAAQAFGADRKAMSAGMNRLRPQDATAAYRSY LRRIAHMVEEHDYLFGAEPCVADFAAYHPLWFTRQCVPVMADIFKATPAVLEWMDRIAAIGHGRMEKFGTQDAITVAAGA EPLPLVDDVFQDEHGIPLGARVSIAAESFGTEPTEGRLVAATRTRYTLARTDPRAGTLHVHFPRIGYTLTSTETTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34951; Mature: 34820
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSLPEPILHHYPSSPFSEKMRLALGFKQLAWKSVIVPSIAPKPDVVALTGGYRRTPFL CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEE QIGADIYCDTALICDVLEHLQPEPVLYPLALKGVSRVFAQWSDTPLFWAAMAYNLQPRGA EECCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCH AELFANLPPTAAQAFGADRKAMSAGMNRLRPQDATAAYRSYLRRIAHMVEEHDYLFGAEP HHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH CVADFAAYHPLWFTRQCVPVMADIFKATPAVLEWMDRIAAIGHGRMEKFGTQDAITVAAG HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECC AEPLPLVDDVFQDEHGIPLGARVSIAAESFGTEPTEGRLVAATRTRYTLARTDPRAGTLH CCCCCHHHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCEEEEEECCEEEEEECCCCCCEEE VHFPRIGYTLTSTETTTP EEECCCCEEEECCCCCCC >Mature Secondary Structure ASSLPEPILHHYPSSPFSEKMRLALGFKQLAWKSVIVPSIAPKPDVVALTGGYRRTPFL CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEE QIGADIYCDTALICDVLEHLQPEPVLYPLALKGVSRVFAQWSDTPLFWAAMAYNLQPRGA EECCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCH AELFANLPPTAAQAFGADRKAMSAGMNRLRPQDATAAYRSYLRRIAHMVEEHDYLFGAEP HHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH CVADFAAYHPLWFTRQCVPVMADIFKATPAVLEWMDRIAAIGHGRMEKFGTQDAITVAAG HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECC AEPLPLVDDVFQDEHGIPLGARVSIAAESFGTEPTEGRLVAATRTRYTLARTDPRAGTLH CCCCCHHHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCEEEEEECCEEEEEECCCCCCEEE VHFPRIGYTLTSTETTTP EEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA