Click here to switch to the map view.

The map label for this gene is 120611504

Identifier: 120611504

GI number: 120611504

Start: 3122884

End: 3125400

Strand: Reverse

Name: 120611504

Synonym: Aave_2840

Alternate gene names: NA

Gene position: 3125400-3122884 (Counterclockwise)

Preceding gene: 120611505

Following gene: 120611503

Centisome position: 58.39

GC content: 65.44

Gene sequence:

>2517_bases
ATGACACGTCGAGTCACCATTCAAACCCCGCTGGGCGATGCGCTGCACTTCCGGGAGCTCAAGGGCCGGGAGGAACTGAG
CCAGGTCTTCAGCCTCGACATCGACCTGCTGAGCGAGGACAAAAGCATCGACCCGAAGGCGCTTCTGGGCAAGAGCGCGA
CGGTGGTGGTGGAGACCGAAGGCGGTGGCCGGCGCTACCTCGACGGGATCGTGACGCGCTTCGGCATGCAGGGGCAGGAC
CACCGCTTCTACGCCTACCGACTGCGGCTGCAGCCTTGGGTTTGGCTGGCCTCGCGCAAGAGCGATTTCCGGATATTCCA
GAACAAGAGCGTGCCGCAGATCATCGAAGAGGTGCTGGGCGCGTACGGATATCCGATGGAAAAGAAACTCAGCCGCAGCT
ACCGCACATGGGAATACTGCGTGCAATATGACGAGAGCGACCTGCAGTTCGTCTCGCGGCTGATGGAGCACGAGGGCATC
TATTACTACCACCAGCATGCGCAGGGCCAGCACACGCTGACGCTGGCCGACGACATCGTGGCCTCGCACCAGCCACTGCC
CGGGGCGGCCACGATTCCGTTCTATCCGCCCGAGAAATCGGCGGTGGCCGACCGCGAGAACATCCACGCCTGGGAGCTGC
ACGAGGAGATCCACTCGGGCCGCTTCTACAACGACGACTACGACTTCAAGAAGCCCAAGGCGGACCTGGCGAACATGCGG
CAGATGCCGCCGGGGCACAGCCACGATGCGTACGAGACGTACGAGTGGCCCGGGGGCTACACGGAGTTCGGCGACGGCGA
GGCCTATGCACGGGTGCGGCTGCAGGAGAACCTGAGCGGGCGCAGCACGGTGCGCGGCGAGTCGCGCCACCGGTCCCTGG
CCACGGGCTACCTCTTCACGCTGGAGAACTACCCGCGCGCAGACCAGAACCAGCAATACCTGATCACCGGCCTGCAGTAC
CACTTCAAGGAGAACCCGCGGGTGAGCGCGGCGAACCCGGGGCAGAAGGGCACCGTGCAGGAAGAAGGCTCGTTCCAGCG
CTTCACGCTGCAGGCGCAGCCCACGAGCCTGCCGTACACGCCGGCACGGGTGACGCCCAAGCCGAAGACCACGGGGCCGC
AGACCGCGGTGGTGGTGGGCCCGCCGGGCGAGGAGATCTGGCCGGACCAGTACGGGCGGGTGAAGGTGCAGTTCCACTGG
GACCGGCAGGGCAGGTTCGACGAGCAGTCCAGCTGCTGGATCCGTGTGTCGCAGGGCTGGGCAGGGCAGAACTACGGCAG
CATCTACCTGCCGCGCATCGGGCAGGAAGTCATCGTGGACTTCTTGTCCGGAGACCCGGACCAGCCGATCATCACGGGGC
GGGTGTACAACGCGGACCAGATGCCGCCGTGGAAGCTGCCGGAGCACAAGACGCAGTCGGGCACGCTCACGCGCTGGAGC
AAGGGTGGGGGCGGGGCGAGCATGCTGCGCTTCGAGGACCAGAAGGGGATAGAGCACCTGGAGCTGTCGAACACGTACGG
CAACACGTACCTGAACATGGGGTACCTGATGCACCAGGGCACGGGGTCGCAGCGGGGGTATGGCTTCGAGCTGCGCACGG
ACCTGTGGGGATCGATCCGCGCGGACAAGGGCCTGCTCATCACCACGTACAACCAGGATTTCACCTCCCGCGTCTCGGTG
AACAACCCGGACGGTTTCGAGCACATGGGAGCGACGCTGGCCAACACCGCTTCGCTCATGCAGGAAGCCGGGCAGGCGGT
TTCCTCGGCGCAGTCCACCATCGGTACGCTCAATGCGGCGAAATCCTCGCAGATCTCCAGCCTGGGATCGGCCATCGCCG
CGATCACGGGCGGCGGTGCGGGAGGCGCGGCCTCGCTCGCCAAGATGGCCTCGGCGCTCTCGGGTGATGGCGGCGGCGCG
GAAACCGCCATGCCCACCGACACCGACCCCGCCATGGCCGATGCGCGCAGCCTGATGGACCTGTCACGGGACATCACCAA
GCCGGTGGTCTCTATCGTGAGCCCGGAGGGCCAGAGCCTCATCAGCCCCAAGCCGATCGTGGTCAGCTCCGGCCAGAGCA
CCTCGGTGCGCGCGCAGCAGCACGTGACCGTATCGAGCGGTGCGCAGCTCACGCAGCTGGCCAAAAGCGGCATGCTCACC
CATGTCACCGAAGGCGGGCAGACCAATATCGTCTCGGCCGGCGACGTGGCCTCCGTCGCCAAGACCGGCCACATGAACCT
CGTGGCGGAGCAGAACATCACCGTGTCGTCCACGGCGCTCAATGCCCACCTGCTGGCCAAGGAAAACGCCGTGGTCAACG
CGGAAACCGACACGGTTTTCGTCAGTGCGGGCAAGCACATCACCGAGGTGGCCGGCGAGAGCATCACGCTGGTGTGCGGC
AAGGCTTCCATCACCCTCAAAGCCGACGGCACCATCGTGCTCAACGGCGTGAAAGGCGTCTTCAATTTCGAGGACGACCT
CGACCAGTTCGGCAAGAAGATCAACCTGAATTGCTGA

Upstream 100 bases:

>100_bases
TCCGTGATTGCCGGCGGAGCGATCACGGCTATGATTTGGCGCCGGCACCATTTCCTGGAATAGGAAAATAAATAATACTT
TTAATACGTTTGGTTGCACC

Downstream 100 bases:

>100_bases
AAACAGCCCCACCGACGAGAGAAAGCAGACAGCGCATGCGCTACCACTTCCAAGAAGGCCACATCGAAGCCCCGGACCAT
GTCACCGACCGCACCGTGCA

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Vgr Protein

Number of amino acids: Translated: 838; Mature: 837

Protein sequence:

>838_residues
MTRRVTIQTPLGDALHFRELKGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGMQGQD
HRFYAYRLRLQPWVWLASRKSDFRIFQNKSVPQIIEEVLGAYGYPMEKKLSRSYRTWEYCVQYDESDLQFVSRLMEHEGI
YYYHQHAQGQHTLTLADDIVASHQPLPGAATIPFYPPEKSAVADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLATGYLFTLENYPRADQNQQYLITGLQY
HFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPKTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHW
DRQGRFDEQSSCWIRVSQGWAGQNYGSIYLPRIGQEVIVDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYNQDFTSRVSV
NNPDGFEHMGATLANTASLMQEAGQAVSSAQSTIGTLNAAKSSQISSLGSAIAAITGGGAGGAASLAKMASALSGDGGGA
ETAMPTDTDPAMADARSLMDLSRDITKPVVSIVSPEGQSLISPKPIVVSSGQSTSVRAQQHVTVSSGAQLTQLAKSGMLT
HVTEGGQTNIVSAGDVASVAKTGHMNLVAEQNITVSSTALNAHLLAKENAVVNAETDTVFVSAGKHITEVAGESITLVCG
KASITLKADGTIVLNGVKGVFNFEDDLDQFGKKINLNC

Sequences:

>Translated_838_residues
MTRRVTIQTPLGDALHFRELKGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGMQGQD
HRFYAYRLRLQPWVWLASRKSDFRIFQNKSVPQIIEEVLGAYGYPMEKKLSRSYRTWEYCVQYDESDLQFVSRLMEHEGI
YYYHQHAQGQHTLTLADDIVASHQPLPGAATIPFYPPEKSAVADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLATGYLFTLENYPRADQNQQYLITGLQY
HFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPKTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHW
DRQGRFDEQSSCWIRVSQGWAGQNYGSIYLPRIGQEVIVDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYNQDFTSRVSV
NNPDGFEHMGATLANTASLMQEAGQAVSSAQSTIGTLNAAKSSQISSLGSAIAAITGGGAGGAASLAKMASALSGDGGGA
ETAMPTDTDPAMADARSLMDLSRDITKPVVSIVSPEGQSLISPKPIVVSSGQSTSVRAQQHVTVSSGAQLTQLAKSGMLT
HVTEGGQTNIVSAGDVASVAKTGHMNLVAEQNITVSSTALNAHLLAKENAVVNAETDTVFVSAGKHITEVAGESITLVCG
KASITLKADGTIVLNGVKGVFNFEDDLDQFGKKINLNC
>Mature_837_residues
TRRVTIQTPLGDALHFRELKGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGMQGQDH
RFYAYRLRLQPWVWLASRKSDFRIFQNKSVPQIIEEVLGAYGYPMEKKLSRSYRTWEYCVQYDESDLQFVSRLMEHEGIY
YYHQHAQGQHTLTLADDIVASHQPLPGAATIPFYPPEKSAVADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMRQ
MPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLATGYLFTLENYPRADQNQQYLITGLQYH
FKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPKTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWD
RQGRFDEQSSCWIRVSQGWAGQNYGSIYLPRIGQEVIVDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWSK
GGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYNQDFTSRVSVN
NPDGFEHMGATLANTASLMQEAGQAVSSAQSTIGTLNAAKSSQISSLGSAIAAITGGGAGGAASLAKMASALSGDGGGAE
TAMPTDTDPAMADARSLMDLSRDITKPVVSIVSPEGQSLISPKPIVVSSGQSTSVRAQQHVTVSSGAQLTQLAKSGMLTH
VTEGGQTNIVSAGDVASVAKTGHMNLVAEQNITVSSTALNAHLLAKENAVVNAETDTVFVSAGKHITEVAGESITLVCGK
ASITLKADGTIVLNGVKGVFNFEDDLDQFGKKINLNC

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91841; Mature: 91709

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRVTIQTPLGDALHFRELKGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETE
CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCEEEEEEEC
GGGRRYLDGIVTRFGMQGQDHRFYAYRLRLQPWVWLASRKSDFRIFQNKSVPQIIEEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCCEEEECCCCHHHHHHHHHH
AYGYPMEKKLSRSYRTWEYCVQYDESDLQFVSRLMEHEGIYYYHQHAQGQHTLTLADDIV
HCCCCHHHHHHHHHHCEEHHEECCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHH
ASHQPLPGAATIPFYPPEKSAVADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
HCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHH
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLATGYLFT
CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHEEEEEEEE
LENYPRADQNQQYLITGLQYHFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYT
ECCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PARVTPKPKTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWDRQGRFDEQSSCWIRVSQGW
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCC
AGQNYGSIYLPRIGQEVIVDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
CCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIR
CCCCCCEEEEECCCCCCCEEEECCCCCCEEEECCEEEECCCCCCCCCCEEECCCCCCCEE
ADKGLLITTYNQDFTSRVSVNNPDGFEHMGATLANTASLMQEAGQAVSSAQSTIGTLNAA
CCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
KSSQISSLGSAIAAITGGGAGGAASLAKMASALSGDGGGAETAMPTDTDPAMADARSLMD
HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
LSRDITKPVVSIVSPEGQSLISPKPIVVSSGQSTSVRAQQHVTVSSGAQLTQLAKSGMLT
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEHEEEEEECCCHHHHHHHHCCCEE
HVTEGGQTNIVSAGDVASVAKTGHMNLVAEQNITVSSTALNAHLLAKENAVVNAETDTVF
EECCCCCEEEEECCCHHHHHHCCCEEEEEECCEEEEEEECEEEEEECCCEEEECCCCEEE
VSAGKHITEVAGESITLVCGKASITLKADGTIVLNGVKGVFNFEDDLDQFGKKINLNC
EECCCHHHHHCCCEEEEEEECEEEEEEECCEEEEECCCCEECCHHHHHHHCCEEECCC
>Mature Secondary Structure 
TRRVTIQTPLGDALHFRELKGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETE
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCEEEEEEEC
GGGRRYLDGIVTRFGMQGQDHRFYAYRLRLQPWVWLASRKSDFRIFQNKSVPQIIEEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCCEEEECCCCHHHHHHHHHH
AYGYPMEKKLSRSYRTWEYCVQYDESDLQFVSRLMEHEGIYYYHQHAQGQHTLTLADDIV
HCCCCHHHHHHHHHHCEEHHEECCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHH
ASHQPLPGAATIPFYPPEKSAVADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
HCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHH
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLATGYLFT
CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHEEEEEEEE
LENYPRADQNQQYLITGLQYHFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYT
ECCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PARVTPKPKTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWDRQGRFDEQSSCWIRVSQGW
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCC
AGQNYGSIYLPRIGQEVIVDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
CCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIR
CCCCCCEEEEECCCCCCCEEEECCCCCCEEEECCEEEECCCCCCCCCCEEECCCCCCCEE
ADKGLLITTYNQDFTSRVSVNNPDGFEHMGATLANTASLMQEAGQAVSSAQSTIGTLNAA
CCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
KSSQISSLGSAIAAITGGGAGGAASLAKMASALSGDGGGAETAMPTDTDPAMADARSLMD
HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
LSRDITKPVVSIVSPEGQSLISPKPIVVSSGQSTSVRAQQHVTVSSGAQLTQLAKSGMLT
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEHEEEEEECCCHHHHHHHHCCCEE
HVTEGGQTNIVSAGDVASVAKTGHMNLVAEQNITVSSTALNAHLLAKENAVVNAETDTVF
EECCCCCEEEEECCCHHHHHHCCCEEEEEECCEEEEEEECEEEEEECCCEEEECCCCEEE
VSAGKHITEVAGESITLVCGKASITLKADGTIVLNGVKGVFNFEDDLDQFGKKINLNC
EECCCHHHHHCCCEEEEEEECEEEEEEECCEEEEECCCCEECCHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA