| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611503
Identifier: 120611503
GI number: 120611503
Start: 3122414
End: 3122848
Strand: Reverse
Name: 120611503
Synonym: Aave_2839
Alternate gene names: NA
Gene position: 3122848-3122414 (Counterclockwise)
Preceding gene: 120611504
Following gene: 120611502
Centisome position: 58.34
GC content: 65.75
Gene sequence:
>435_bases ATGCGCTACCACTTCCAAGAAGGCCACATCGAAGCCCCGGACCATGTCACCGACCGCACCGTGCATCTGCTCGCGCCCAC CCCGGGCACGGGCGAGATGACCGTCGCCATTTCCAAGGATCTGCTCGAAGCCGGCGAAACCCCGCCGGAATTCCTTCAGC GGCAGCTCGGCGACCTGTCGCGGCAGGTCGCCAAGTTCAGCCGGGGCGAGGTGCAGCCGGCCACGCTCGGCGCCCCCGAA CAGAAGATCGGCGGCTCGAAATTCACCGTGAGCTACAAGCAACAGGGGCGCATGGTGCACCACGTGCAGTCGCTGTTCCT GCTGCCCGACGGCCGCACCGTGCTCAATCTCACCTTTTCGCTGCCGGTGCCATTCACGGAAGAACACCTGCGGCAGGTCG ATGGCGTGCTGGCCAGCTTCGTGCTGCGCCAGTGA
Upstream 100 bases:
>100_bases AAGGCGTCTTCAATTTCGAGGACGACCTCGACCAGTTCGGCAAGAAGATCAACCTGAATTGCTGAAAACAGCCCCACCGA CGAGAGAAAGCAGACAGCGC
Downstream 100 bases:
>100_bases CACCGGTGGCAAGGTAGGCCGCAAAAACCACGACAGGAGAACACCAGCATGGGAGGCATGGCGGCGGCACGGCAGGCGGA CGAGATAGGTCACGTGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRYHFQEGHIEAPDHVTDRTVHLLAPTPGTGEMTVAISKDLLEAGETPPEFLQRQLGDLSRQVAKFSRGEVQPATLGAPE QKIGGSKFTVSYKQQGRMVHHVQSLFLLPDGRTVLNLTFSLPVPFTEEHLRQVDGVLASFVLRQ
Sequences:
>Translated_144_residues MRYHFQEGHIEAPDHVTDRTVHLLAPTPGTGEMTVAISKDLLEAGETPPEFLQRQLGDLSRQVAKFSRGEVQPATLGAPE QKIGGSKFTVSYKQQGRMVHHVQSLFLLPDGRTVLNLTFSLPVPFTEEHLRQVDGVLASFVLRQ >Mature_144_residues MRYHFQEGHIEAPDHVTDRTVHLLAPTPGTGEMTVAISKDLLEAGETPPEFLQRQLGDLSRQVAKFSRGEVQPATLGAPE QKIGGSKFTVSYKQQGRMVHHVQSLFLLPDGRTVLNLTFSLPVPFTEEHLRQVDGVLASFVLRQ
Specific function: Unknown
COG id: COG5435
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16012; Mature: 16012
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYHFQEGHIEAPDHVTDRTVHLLAPTPGTGEMTVAISKDLLEAGETPPEFLQRQLGDLS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHH RQVAKFSRGEVQPATLGAPEQKIGGSKFTVSYKQQGRMVHHVQSLFLLPDGRTVLNLTFS HHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEHHHHCCHHHHHHHHEECCCCCEEEEEEEE LPVPFTEEHLRQVDGVLASFVLRQ CCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYHFQEGHIEAPDHVTDRTVHLLAPTPGTGEMTVAISKDLLEAGETPPEFLQRQLGDLS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHH RQVAKFSRGEVQPATLGAPEQKIGGSKFTVSYKQQGRMVHHVQSLFLLPDGRTVLNLTFS HHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEHHHHCCHHHHHHHHEECCCCCEEEEEEEE LPVPFTEEHLRQVDGVLASFVLRQ CCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA