| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is pgm [H]
Identifier: 120611486
GI number: 120611486
Start: 3096613
End: 3098073
Strand: Reverse
Name: pgm [H]
Synonym: Aave_2822
Alternate gene names: 120611486
Gene position: 3098073-3096613 (Counterclockwise)
Preceding gene: 120611491
Following gene: 120611485
Centisome position: 57.88
GC content: 69.82
Gene sequence:
>1461_bases ATGCACGGCCGCGCCGGCGCCATGAAGGGCGCCGTGGCCGCAGTGCGGGCCTGCCAGCAAAGGAACCTTCCCGTGCAGCT TCATTCCGCCATTTTCAAGGCCTACGATATCCGCGGCGTCGTGCCGACCACCCTGACCGAAGACGTCGCGCGCGCCCTGG GCCGCGCATTTGGCACGGCGGCCCGCCGCGAAGGCCAGACCACCGTGGCGGTGGGGCGGGACGGGCGGCTGTCCGGCCCG GCGCTGTCCCGCGCGCTGATCGAAGGCCTGGTGGACGCAGGCATCGAGGTGATCGACGTCGGCGCCGTGACCACGCCGAT GCTGTACTTCGCGGCCCACACCCTGTGCCAGAGCGGCATCCAGGTGACGGGCAGCCACAACCCCAAGGATTACAACGGCT TCAAGATGGTGCTGGCCGGCCGTGCCATCTACGGCGAGGAGATCCAGGGCCTGCGCCGCACGATGGAAGAGGAGAGCTGG GAATTACAGCCCGGCGGCTCGGTGCGGCAGGCCGACGTGCTGCCCGCCTACGTGCAGCGCATCACGTCCGACGTGAAGCT CGAGCGCCCCATCAAGATCGTGGTGGACAGCGGCAACGGCATCGCGGGCGCGTCTGCGCCGGGTATCTTCCGGGCGCTGG GCTGCGAGGTGATCGAGCTGTTCTCCCAGGTGGACGGCAATTTCCCCAATCACCACCCGGACCCCAGCAAGCCCGAGAAC CTGCGCGACCTGATCCGCGCGCTGCAGGAGAGCGACGCCGAGCTGGGCCTGGCCTTCGACGGCGACGGCGACCGGCTGGG CATCGTCACCAAGGACGGGCAGAACATCTTCCCCGACCGCCAGATGATGCTGTTCGCGCGCGACGTGCTCTCGCGCGTGC CGGGCGCGCCCATCCTGTTCGACGTGAAGTGCACGCAGCGCCTGGCCCCGGCGATCGAGGCCGTGGGTGGCCAGGCCGTG ATGTACAAGACCGGCCATTCGCTCATCAAGGCGCGCATGAAGGAACTCGACTCGCCGCTGGGTGGCGAGATGAGCGGCCA CATCTTCTTCAAGGAGCGCTGGTTCGGCTTCGACGACGGCACCTACGCCGGCTGCCGGCTGCTCGAGATCCTGAGCCGCC ATGCCGACCCGAGCGCGGTGCTCAACGACCTGCCCACCAGCCATTCGACGCCCGAGCTGAACGTGGCCTGCGAGGAGGGC GAGCCCCACCGCCTGACGGCCGAGCTGCAGGCGCTGGCGCAGAGCGCGTTCCCGGAGCCGGCGCGCATCAGCACCATCGA CGGCCTGCGGGTGGACTGGCCGGACGGCTTCGGCCTGATCCGGGCGAGCAACACCACGCCGGTGCTGGTGCTGCGTTTCG AGGGGCATACGCCCGAGGCGCTGCACCGCATCGAAGGCGCCATGCTGGAGCTGCTGCAGCGCGTGAAGCCCGGCGCAGCT CCGGGCGCGGCCGCGCATTGA
Upstream 100 bases:
>100_bases GCCCGTCCGCCGGGAGTGCGCACGACGCCTACAATCCCCGCGAATCCGCAGATGGCGTGCCTCCGTTACCTGGAGGGCGC CGCATTCGCTCCACCGGCCC
Downstream 100 bases:
>100_bases GGACGAGTGCCATGCGCGTCGCGGCGGCCCAGGCCTCCTCCCTGCCCGGCGGTCCGGAAGCGAATGTCGGCAACCACCTG CGCTTCGCCGAGGCCGCGGC
Product: phosphomannomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MHGRAGAMKGAVAAVRACQQRNLPVQLHSAIFKAYDIRGVVPTTLTEDVARALGRAFGTAARREGQTTVAVGRDGRLSGP ALSRALIEGLVDAGIEVIDVGAVTTPMLYFAAHTLCQSGIQVTGSHNPKDYNGFKMVLAGRAIYGEEIQGLRRTMEEESW ELQPGGSVRQADVLPAYVQRITSDVKLERPIKIVVDSGNGIAGASAPGIFRALGCEVIELFSQVDGNFPNHHPDPSKPEN LRDLIRALQESDAELGLAFDGDGDRLGIVTKDGQNIFPDRQMMLFARDVLSRVPGAPILFDVKCTQRLAPAIEAVGGQAV MYKTGHSLIKARMKELDSPLGGEMSGHIFFKERWFGFDDGTYAGCRLLEILSRHADPSAVLNDLPTSHSTPELNVACEEG EPHRLTAELQALAQSAFPEPARISTIDGLRVDWPDGFGLIRASNTTPVLVLRFEGHTPEALHRIEGAMLELLQRVKPGAA PGAAAH
Sequences:
>Translated_486_residues MHGRAGAMKGAVAAVRACQQRNLPVQLHSAIFKAYDIRGVVPTTLTEDVARALGRAFGTAARREGQTTVAVGRDGRLSGP ALSRALIEGLVDAGIEVIDVGAVTTPMLYFAAHTLCQSGIQVTGSHNPKDYNGFKMVLAGRAIYGEEIQGLRRTMEEESW ELQPGGSVRQADVLPAYVQRITSDVKLERPIKIVVDSGNGIAGASAPGIFRALGCEVIELFSQVDGNFPNHHPDPSKPEN LRDLIRALQESDAELGLAFDGDGDRLGIVTKDGQNIFPDRQMMLFARDVLSRVPGAPILFDVKCTQRLAPAIEAVGGQAV MYKTGHSLIKARMKELDSPLGGEMSGHIFFKERWFGFDDGTYAGCRLLEILSRHADPSAVLNDLPTSHSTPELNVACEEG EPHRLTAELQALAQSAFPEPARISTIDGLRVDWPDGFGLIRASNTTPVLVLRFEGHTPEALHRIEGAMLELLQRVKPGAA PGAAAH >Mature_486_residues MHGRAGAMKGAVAAVRACQQRNLPVQLHSAIFKAYDIRGVVPTTLTEDVARALGRAFGTAARREGQTTVAVGRDGRLSGP ALSRALIEGLVDAGIEVIDVGAVTTPMLYFAAHTLCQSGIQVTGSHNPKDYNGFKMVLAGRAIYGEEIQGLRRTMEEESW ELQPGGSVRQADVLPAYVQRITSDVKLERPIKIVVDSGNGIAGASAPGIFRALGCEVIELFSQVDGNFPNHHPDPSKPEN LRDLIRALQESDAELGLAFDGDGDRLGIVTKDGQNIFPDRQMMLFARDVLSRVPGAPILFDVKCTQRLAPAIEAVGGQAV MYKTGHSLIKARMKELDSPLGGEMSGHIFFKERWFGFDDGTYAGCRLLEILSRHADPSAVLNDLPTSHSTPELNVACEEG EPHRLTAELQALAQSAFPEPARISTIDGLRVDWPDGFGLIRASNTTPVLVLRFEGHTPEALHRIEGAMLELLQRVKPGAA PGAAAH
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=439, Percent_Identity=35.3075170842825, Blast_Score=214, Evalue=9e-57, Organism=Escherichia coli, GI1789566, Length=461, Percent_Identity=28.1995661605206, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 52307; Mature: 52307
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGRAGAMKGAVAAVRACQQRNLPVQLHSAIFKAYDIRGVVPTTLTEDVARALGRAFGTA CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARREGQTTVAVGRDGRLSGPALSRALIEGLVDAGIEVIDVGAVTTPMLYFAAHTLCQSGI HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCC QVTGSHNPKDYNGFKMVLAGRAIYGEEIQGLRRTMEEESWELQPGGSVRQADVLPAYVQR EEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ITSDVKLERPIKIVVDSGNGIAGASAPGIFRALGCEVIELFSQVDGNFPNHHPDPSKPEN HHHCCEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH LRDLIRALQESDAELGLAFDGDGDRLGIVTKDGQNIFPDRQMMLFARDVLSRVPGAPILF HHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEE DVKCTQRLAPAIEAVGGQAVMYKTGHSLIKARMKELDSPLGGEMSGHIFFKERWFGFDDG ECHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC TYAGCRLLEILSRHADPSAVLNDLPTSHSTPELNVACEEGEPHRLTAELQALAQSAFPEP CHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC ARISTIDGLRVDWPDGFGLIRASNTTPVLVLRFEGHTPEALHRIEGAMLELLQRVKPGAA CCEEEECCCEEECCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC PGAAAH CCCCCC >Mature Secondary Structure MHGRAGAMKGAVAAVRACQQRNLPVQLHSAIFKAYDIRGVVPTTLTEDVARALGRAFGTA CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARREGQTTVAVGRDGRLSGPALSRALIEGLVDAGIEVIDVGAVTTPMLYFAAHTLCQSGI HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCC QVTGSHNPKDYNGFKMVLAGRAIYGEEIQGLRRTMEEESWELQPGGSVRQADVLPAYVQR EEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ITSDVKLERPIKIVVDSGNGIAGASAPGIFRALGCEVIELFSQVDGNFPNHHPDPSKPEN HHHCCEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH LRDLIRALQESDAELGLAFDGDGDRLGIVTKDGQNIFPDRQMMLFARDVLSRVPGAPILF HHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEE DVKCTQRLAPAIEAVGGQAVMYKTGHSLIKARMKELDSPLGGEMSGHIFFKERWFGFDDG ECHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC TYAGCRLLEILSRHADPSAVLNDLPTSHSTPELNVACEEGEPHRLTAELQALAQSAFPEP CHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC ARISTIDGLRVDWPDGFGLIRASNTTPVLVLRFEGHTPEALHRIEGAMLELLQRVKPGAA CCEEEECCCEEECCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC PGAAAH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157643; 8188595 [H]