Click here to switch to the map view.

The map label for this gene is avrPphD [H]

Identifier: 120611466

GI number: 120611466

Start: 3074459

End: 3076642

Strand: Direct

Name: avrPphD [H]

Synonym: Aave_2802

Alternate gene names: 120611466

Gene position: 3074459-3076642 (Clockwise)

Preceding gene: 120611465

Following gene: 120611467

Centisome position: 57.44

GC content: 69.83

Gene sequence:

>2184_bases
ATGACCTTCCTGCAATTTCCCGCCCTCCGCCGCAGCAGCTCCGCCGGAGAAACCTCGTCTTCAGGTGCGGCCTCGCCGCC
GCAGTCTCCAGCGTCATCCAGCGGCACCGGCAGCCGCCGGCATGCCTCCGGCGGCCTGACCGAGCCGTTGCTGCGCCAGC
GTCCGGCTGAAGAGCCGGACGGGGCGCCTCCGCCCCCCCCGGCCAGCGCGCCACATCGTAATATGCGGCTGCGCGGCGCG
GTGCTGCGGCAGATGCTGGCCGCGGAACGCACCCGCGCGGGCCAGCGCCTCGCGCAGGCGGATGCGCTGCACGGCACGCA
GGCCCGCCGCGAAGCTCGCACGCAGGCGAACCTGACCACGCTGGCGCGCCAGGCCGTGCTGCAGGTGCGGCTGAACCGCG
TGCAGCGGGACGCCTACGTCGCGCGGCTCAAGGAAGTGATTTCCACCGACCAGTTCCAGCACCCCATGGCGCTCAAGGGC
GCCGTCGGCCGCGGACCGGACCAGCGCCTGGCCTCCCCGGACAAGGCCATCCAGGCCGTGCTGGACTACGTACAGGCGAA
GCATCCGCAAGAGGCAGCTCGCCTCGACCTGCAGGGCACCACCGAACTGCGGCTGCCGCTGGAGGCCGACATCCTCCTGA
ACACCTGGGAGTTCTCCGCGGGCTGCAAGGTACGGGAAATTCACCTGGCCGACGGCGGCACGGAGGAAGCCGACATCGAC
CTCTCCACGTATGCGGCGCGAGAAGCGATCAAGAAAGGAGCGGCGGCTTTCGGCGAGGAGGCCCGGCTGCGCCCGGTCAG
CCTCAAGGACGTGGAACCCTCCAGCGAAGCCGAGGACGCCCACCTCACGCCGGCTCCAGGGCTGGAGGGCAACCCGGAAA
AGCACCCGTTCGCCTTCCTGCAGGGCGTGCGCTACCGGGCCGAATCGGACCATGAGGGCCTGCAGGCACTGGTCAACCGC
TGCCTGGGGGCCAGCGATCCCGTCACCCTCGAGCTTCGCGGGCGCATGGGCGCGCAGGCCGTCAATGCCGTGCTGACCCA
GAAGCAATTCTCGCCGGAACTGGGATGGAGCATGCTGGCGAGCCTGGTGGGCAGCGGCGGGCTGGCGTATGCGCTGGACG
TCGTGGCCTGGGGCGCGGTGATGGGCCAGGTATCCGCGGCCCTCGGCGAGGACCATCCCGCCACCCGCATGACGGAAGTG
CTGCTGGCGTCGCTCACGCCCCTGTTCGCGGAAACCGTGGACTCCCTCGTCATCAAGCGCCTGCTCGGCACGTTCCAGAA
TGAGCCCCTGCTGCCGGAAACCTTCGCGGAATTCATGGACGACCTGAAGGATTCAGCGATTTCCGGCACCATCGCGGCCA
TCGGATCCATTCCGAACAATGTCGCCGGGCTGACGCAGCGCTGGGCCATGGAGCCCGTCAGCATGGTCACCAACCAGATC
GCGGTCTCCACCTCGGGTGCCATGGTCCCGCGGGAAGTCGCGGCGGCCCATGGCGAAATGGCGACGGGGGTGCTGCAACG
CAAGAATGATGGCTTCTTTCCGCCCCCCGACGTGGCCCTGGCCGCCGGATCCAGCGAGGCCCAGGCCCGGCGCGCGCTGG
CCGACCACGCCATGGCGGATACGCAGGGCGCGCTGGAGGCGGCCCCTGGCCACGGCCTGGCCATCAACTCGATGGGCATC
GGCTCGGTCATCAGCCTGCTCACGGGATTCCTGCCGTTCGACACCATGGCCCGCGCCCACGTGCTGCCGACCGTGGTGCA
GAAGATCGTCACCATCATGGTCAATACGCCCACGGAAGTGCTCAGCCTGGGCGCCGGCATCCTGACCGGCAACCATCTCG
GCGGCATCGGCGGCAAGCTCACCACGGACGCCGAGAAGAACCGCCGCATCATCGAACTCATCGCCCACAAGGCGGTCGAG
CGGCTCGGGCAGGCGCAGTCGGGCGGGGCGCAGGGCATCGAGATCACCGAGGCGGAGCTGCAGGCCATCGAGCACCCCTC
CCTGGCGCTCACTTTCCCGGCCGGGCGGACCATCGTCAACACGATGAACGGCGTGGCAGACATGGTGTCGCGCTGCTGGG
GCGCGCTGCGCGGCGTGCCCCCTGAGCGCCCCGGGGAGCAGGTGGACGTGAACGCACTGATGCAGCGCATGGCGGACCAG
GGCCGCCATTCCGCGCCGGTGTGA

Upstream 100 bases:

>100_bases
CAGCAAACGGCCATCCAGAAGGCTGTGGCGGCCTGTCCGGCCGTTCCCGGCGCCTCGTACGAGGCCGGCCCCGCAGCCTG
ATCCTTCCGAAAAGAAAACC

Downstream 100 bases:

>100_bases
CGCCGGCGTGCGCTGCCGCGGCACGGAGGCGGGCGGAAGGCATGCACAATCGCGGCATGTCTTCCCCCTCCTCCCCGTTG
TCGTCCTCCATCGCCGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MTFLQFPALRRSSSAGETSSSGAASPPQSPASSSGTGSRRHASGGLTEPLLRQRPAEEPDGAPPPPPASAPHRNMRLRGA
VLRQMLAAERTRAGQRLAQADALHGTQARREARTQANLTTLARQAVLQVRLNRVQRDAYVARLKEVISTDQFQHPMALKG
AVGRGPDQRLASPDKAIQAVLDYVQAKHPQEAARLDLQGTTELRLPLEADILLNTWEFSAGCKVREIHLADGGTEEADID
LSTYAAREAIKKGAAAFGEEARLRPVSLKDVEPSSEAEDAHLTPAPGLEGNPEKHPFAFLQGVRYRAESDHEGLQALVNR
CLGASDPVTLELRGRMGAQAVNAVLTQKQFSPELGWSMLASLVGSGGLAYALDVVAWGAVMGQVSAALGEDHPATRMTEV
LLASLTPLFAETVDSLVIKRLLGTFQNEPLLPETFAEFMDDLKDSAISGTIAAIGSIPNNVAGLTQRWAMEPVSMVTNQI
AVSTSGAMVPREVAAAHGEMATGVLQRKNDGFFPPPDVALAAGSSEAQARRALADHAMADTQGALEAAPGHGLAINSMGI
GSVISLLTGFLPFDTMARAHVLPTVVQKIVTIMVNTPTEVLSLGAGILTGNHLGGIGGKLTTDAEKNRRIIELIAHKAVE
RLGQAQSGGAQGIEITEAELQAIEHPSLALTFPAGRTIVNTMNGVADMVSRCWGALRGVPPERPGEQVDVNALMQRMADQ
GRHSAPV

Sequences:

>Translated_727_residues
MTFLQFPALRRSSSAGETSSSGAASPPQSPASSSGTGSRRHASGGLTEPLLRQRPAEEPDGAPPPPPASAPHRNMRLRGA
VLRQMLAAERTRAGQRLAQADALHGTQARREARTQANLTTLARQAVLQVRLNRVQRDAYVARLKEVISTDQFQHPMALKG
AVGRGPDQRLASPDKAIQAVLDYVQAKHPQEAARLDLQGTTELRLPLEADILLNTWEFSAGCKVREIHLADGGTEEADID
LSTYAAREAIKKGAAAFGEEARLRPVSLKDVEPSSEAEDAHLTPAPGLEGNPEKHPFAFLQGVRYRAESDHEGLQALVNR
CLGASDPVTLELRGRMGAQAVNAVLTQKQFSPELGWSMLASLVGSGGLAYALDVVAWGAVMGQVSAALGEDHPATRMTEV
LLASLTPLFAETVDSLVIKRLLGTFQNEPLLPETFAEFMDDLKDSAISGTIAAIGSIPNNVAGLTQRWAMEPVSMVTNQI
AVSTSGAMVPREVAAAHGEMATGVLQRKNDGFFPPPDVALAAGSSEAQARRALADHAMADTQGALEAAPGHGLAINSMGI
GSVISLLTGFLPFDTMARAHVLPTVVQKIVTIMVNTPTEVLSLGAGILTGNHLGGIGGKLTTDAEKNRRIIELIAHKAVE
RLGQAQSGGAQGIEITEAELQAIEHPSLALTFPAGRTIVNTMNGVADMVSRCWGALRGVPPERPGEQVDVNALMQRMADQ
GRHSAPV
>Mature_726_residues
TFLQFPALRRSSSAGETSSSGAASPPQSPASSSGTGSRRHASGGLTEPLLRQRPAEEPDGAPPPPPASAPHRNMRLRGAV
LRQMLAAERTRAGQRLAQADALHGTQARREARTQANLTTLARQAVLQVRLNRVQRDAYVARLKEVISTDQFQHPMALKGA
VGRGPDQRLASPDKAIQAVLDYVQAKHPQEAARLDLQGTTELRLPLEADILLNTWEFSAGCKVREIHLADGGTEEADIDL
STYAAREAIKKGAAAFGEEARLRPVSLKDVEPSSEAEDAHLTPAPGLEGNPEKHPFAFLQGVRYRAESDHEGLQALVNRC
LGASDPVTLELRGRMGAQAVNAVLTQKQFSPELGWSMLASLVGSGGLAYALDVVAWGAVMGQVSAALGEDHPATRMTEVL
LASLTPLFAETVDSLVIKRLLGTFQNEPLLPETFAEFMDDLKDSAISGTIAAIGSIPNNVAGLTQRWAMEPVSMVTNQIA
VSTSGAMVPREVAAAHGEMATGVLQRKNDGFFPPPDVALAAGSSEAQARRALADHAMADTQGALEAAPGHGLAINSMGIG
SVISLLTGFLPFDTMARAHVLPTVVQKIVTIMVNTPTEVLSLGAGILTGNHLGGIGGKLTTDAEKNRRIIELIAHKAVER
LGQAQSGGAQGIEITEAELQAIEHPSLALTFPAGRTIVNTMNGVADMVSRCWGALRGVPPERPGEQVDVNALMQRMADQG
RHSAPV

Specific function: Effector protein involved in non-host recognition and able to elicit hypersensitive response (HR) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76911; Mature: 76780

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLQFPALRRSSSAGETSSSGAASPPQSPASSSGTGSRRHASGGLTEPLLRQRPAEEPD
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GAPPPPPASAPHRNMRLRGAVLRQMLAAERTRAGQRLAQADALHGTQARREARTQANLTT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LARQAVLQVRLNRVQRDAYVARLKEVISTDQFQHPMALKGAVGRGPDQRLASPDKAIQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCHHHHHHHH
LDYVQAKHPQEAARLDLQGTTELRLPLEADILLNTWEFSAGCKVREIHLADGGTEEADID
HHHHHCCCCHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC
LSTYAAREAIKKGAAAFGEEARLRPVSLKDVEPSSEAEDAHLTPAPGLEGNPEKHPFAFL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QGVRYRAESDHEGLQALVNRCLGASDPVTLELRGRMGAQAVNAVLTQKQFSPELGWSMLA
HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH
SLVGSGGLAYALDVVAWGAVMGQVSAALGEDHPATRMTEVLLASLTPLFAETVDSLVIKR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTFQNEPLLPETFAEFMDDLKDSAISGTIAAIGSIPNNVAGLTQRWAMEPVSMVTNQI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
AVSTSGAMVPREVAAAHGEMATGVLQRKNDGFFPPPDVALAAGSSEAQARRALADHAMAD
HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
TQGALEAAPGHGLAINSMGIGSVISLLTGFLPFDTMARAHVLPTVVQKIVTIMVNTPTEV
CCCCHHCCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSLGAGILTGNHLGGIGGKLTTDAEKNRRIIELIAHKAVERLGQAQSGGAQGIEITEAEL
HHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHH
QAIEHPSLALTFPAGRTIVNTMNGVADMVSRCWGALRGVPPERPGEQVDVNALMQRMADQ
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
GRHSAPV
CCCCCCC
>Mature Secondary Structure 
TFLQFPALRRSSSAGETSSSGAASPPQSPASSSGTGSRRHASGGLTEPLLRQRPAEEPD
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GAPPPPPASAPHRNMRLRGAVLRQMLAAERTRAGQRLAQADALHGTQARREARTQANLTT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LARQAVLQVRLNRVQRDAYVARLKEVISTDQFQHPMALKGAVGRGPDQRLASPDKAIQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCHHHHHHHH
LDYVQAKHPQEAARLDLQGTTELRLPLEADILLNTWEFSAGCKVREIHLADGGTEEADID
HHHHHCCCCHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC
LSTYAAREAIKKGAAAFGEEARLRPVSLKDVEPSSEAEDAHLTPAPGLEGNPEKHPFAFL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QGVRYRAESDHEGLQALVNRCLGASDPVTLELRGRMGAQAVNAVLTQKQFSPELGWSMLA
HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH
SLVGSGGLAYALDVVAWGAVMGQVSAALGEDHPATRMTEVLLASLTPLFAETVDSLVIKR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTFQNEPLLPETFAEFMDDLKDSAISGTIAAIGSIPNNVAGLTQRWAMEPVSMVTNQI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
AVSTSGAMVPREVAAAHGEMATGVLQRKNDGFFPPPDVALAAGSSEAQARRALADHAMAD
HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
TQGALEAAPGHGLAINSMGIGSVISLLTGFLPFDTMARAHVLPTVVQKIVTIMVNTPTEV
CCCCHHCCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSLGAGILTGNHLGGIGGKLTTDAEKNRRIIELIAHKAVERLGQAQSGGAQGIEITEAEL
HHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHH
QAIEHPSLALTFPAGRTIVNTMNGVADMVSRCWGALRGVPPERPGEQVDVNALMQRMADQ
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
GRHSAPV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA