| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611423
Identifier: 120611423
GI number: 120611423
Start: 3033830
End: 3034570
Strand: Reverse
Name: 120611423
Synonym: Aave_2759
Alternate gene names: NA
Gene position: 3034570-3033830 (Counterclockwise)
Preceding gene: 120611424
Following gene: 120611422
Centisome position: 56.69
GC content: 65.32
Gene sequence:
>741_bases ATGAGCAGTGGTCAATTTCTCGACGCTCTTGCGTCCGAGCGGCGTCACAACGACCGACTCACGAAGACCATGGCGGGCGT GATCGCGCTCGGCATCGTCAGCACCTGGTTCGCCTGGCGCCAGCCGAAGTCGGTGGATGTCCACCTGGCCCCCGACGTGC GGGCGGGTGACACGGTCCGCGTCAGCGATGGTCGATCGCCGGTGCCATCGCCCAACGTCTACGGCTTTGCCTACTACATC TGGCAGCAAGTCAACCGCTGGCAGACCGATGGTGCCCAGGACTATGGGCAGCAGATCTTCAACTTGCAGTACTACCTCAC GCCGCGCTGCCAGGCCCAGCTGCAGGCGGACATGGAGCTGCGGCAAGGCAAGGGCGAATTGCGCCGGCGCACCCGGCAGA TCTCCGAGATCCCAGGCTTCCCCTACTCCGAAAACCGCGTGCTTGCGGATGGCCCCGATGCCTGGACCGTGCTCCTGGAC ATGCAGGTCACCGAGACGTTCGGCGGGCAGGCGGTGAAGGACGTCTTCATTCGCTACCCGCTGCGCGTTGTGCGATTCGA CGTAGACCGCGAACGCAATCCCTGGCATCTCGCGCTGGACTGCTTCGGCGCGAATCGCCCTGCCCGCCTAAACCCGGCGG ATCTCAAGGCCGGGACCGATGTGCGTATCAGCGTGCAGGCGCCTCGGCTGCCCGGAACGATCTCCCCATCCAGCCTGCCG CGGGACACGGCCGTTGATTGA
Upstream 100 bases:
>100_bases TCGAGCTCGGTCGGCGGCTCGACCTCGATGCCGCGTCCCCGAATAGAAGTGCGGGCGCCGATCGCGCACGCAGCACCAGC ACCCCAACTCCCCAACAGCC
Downstream 100 bases:
>100_bases GGCCGCAGACTGACCATGCTCCATCCTCATCACCGAACCTATCGCCCCCTGCTCGCGCTCATCGTCGCGTGCGCCTCAGC GCAGTTGCACGCGCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSSGQFLDALASERRHNDRLTKTMAGVIALGIVSTWFAWRQPKSVDVHLAPDVRAGDTVRVSDGRSPVPSPNVYGFAYYI WQQVNRWQTDGAQDYGQQIFNLQYYLTPRCQAQLQADMELRQGKGELRRRTRQISEIPGFPYSENRVLADGPDAWTVLLD MQVTETFGGQAVKDVFIRYPLRVVRFDVDRERNPWHLALDCFGANRPARLNPADLKAGTDVRISVQAPRLPGTISPSSLP RDTAVD
Sequences:
>Translated_246_residues MSSGQFLDALASERRHNDRLTKTMAGVIALGIVSTWFAWRQPKSVDVHLAPDVRAGDTVRVSDGRSPVPSPNVYGFAYYI WQQVNRWQTDGAQDYGQQIFNLQYYLTPRCQAQLQADMELRQGKGELRRRTRQISEIPGFPYSENRVLADGPDAWTVLLD MQVTETFGGQAVKDVFIRYPLRVVRFDVDRERNPWHLALDCFGANRPARLNPADLKAGTDVRISVQAPRLPGTISPSSLP RDTAVD >Mature_245_residues SSGQFLDALASERRHNDRLTKTMAGVIALGIVSTWFAWRQPKSVDVHLAPDVRAGDTVRVSDGRSPVPSPNVYGFAYYIW QQVNRWQTDGAQDYGQQIFNLQYYLTPRCQAQLQADMELRQGKGELRRRTRQISEIPGFPYSENRVLADGPDAWTVLLDM QVTETFGGQAVKDVFIRYPLRVVRFDVDRERNPWHLALDCFGANRPARLNPADLKAGTDVRISVQAPRLPGTISPSSLPR DTAVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27761; Mature: 27629
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGQFLDALASERRHNDRLTKTMAGVIALGIVSTWFAWRQPKSVDVHLAPDVRAGDTVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEE VSDGRSPVPSPNVYGFAYYIWQQVNRWQTDGAQDYGQQIFNLQYYLTPRCQAQLQADMEL ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCHHHHHHHHHHH RQGKGELRRRTRQISEIPGFPYSENRVLADGPDAWTVLLDMQVTETFGGQAVKDVFIRYP HCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEHHHCCCHHHHHHHHHCC LRVVRFDVDRERNPWHLALDCFGANRPARLNPADLKAGTDVRISVQAPRLPGTISPSSLP EEEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCC RDTAVD CCCCCC >Mature Secondary Structure SSGQFLDALASERRHNDRLTKTMAGVIALGIVSTWFAWRQPKSVDVHLAPDVRAGDTVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEE VSDGRSPVPSPNVYGFAYYIWQQVNRWQTDGAQDYGQQIFNLQYYLTPRCQAQLQADMEL ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCHHHHHHHHHHH RQGKGELRRRTRQISEIPGFPYSENRVLADGPDAWTVLLDMQVTETFGGQAVKDVFIRYP HCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEHHHCCCHHHHHHHHHCC LRVVRFDVDRERNPWHLALDCFGANRPARLNPADLKAGTDVRISVQAPRLPGTISPSSLP EEEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCC RDTAVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA