| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611419
Identifier: 120611419
GI number: 120611419
Start: 3027900
End: 3030794
Strand: Reverse
Name: 120611419
Synonym: Aave_2755
Alternate gene names: NA
Gene position: 3030794-3027900 (Counterclockwise)
Preceding gene: 120611420
Following gene: 120611418
Centisome position: 56.62
GC content: 65.91
Gene sequence:
>2895_bases ATGAAGAAGTGGTTCGACGTGCTGCTTGGCCGCTCCTCGTCGGCAAGCGGGGAGCGCGCTGCGCCGTCGCCCGCAGCCTC CGGCGCGCCTGGCAAGCCGATGACCTTAGCGGACCGTCGCAGGATGGCGGCCAGGCCGCCGTCGTTCACCGAGCTTCTGC CGTACGTTTGCTATTCGCCGGCGGAGCAGGTGTTTGCCATGCGCGATGGCGCCACCCTGGGCGCCATGTTCGAGCTCAGT CCGGTGGCTACCGAGGCGCAGCCGCTCACCTACCTGCAGGAGCGCGCCCGCAAGGTGCAGGAGGCCCTGCAGGCGATCCC CGAGGCCGAAGGCTCGCCCTGGATCGTGCAGTTCTTCCTGAGCGACGACCGCAACGTCGAGATCCTGAACCAGCAGCTGC ACGACTACATCCTGTCCCAGCACAAGGACAACCCGCGCCGGGCCCAGGAGGTGATTTCCTCCGAGTACACCCAGTCCGTC CTGGCCGAGATGCGCAAGCACCTGGACCAGGTGTCCCGCCCGCAGGGCCTGTTCACCGACACCCTCGTCACCGGCCAGGT CTGGCGGGGCCAGCAGCGCCGCGTGCGCTGCTGCATCTACCGCAAGTTCACCGGCCTGGCGAACGAGCCAGCCGAGCCGA TCAAGCAGATGGAGGGCGCCGCCACGACGTTGTTCGCGACGTTCACCGAGGCGGGCGTCACCGCGCGCCGCTGCAACGGC CGAGACTTCTACGAATGGCTCCTGCCCTTCTTCAATCGCGATGTTCCGTGGGCACCCACGCCGGGTGAGCTGTTGCAGAA GGCGCCCTACCCGGGCGAGATGCCTGAAGGCATGTTCGACTGGGACCTGGCCGAGTCGCTGTCGCTCAGCCAGCCGCGTG CGGACGTCGATGCCGGTCTCTTCGAGTTCGACGGCGTGCCCGTGAAGGCTCTGACGCTGCAGAACCTGCGTGGCCAGCCC GCCATCGGGCACTTCTCGGCGGAGCTCACCAGCGGCAAGGAGAGCTATGCGCGCTTCGACCGCCTCCCACCCGGATCCAT GCTGTCGATGACCGTCACCGTGACGCCGCAGCACCTGGTGGAGCGGAAGGTGGAACGCATCCGCGACAAGTCGCGGGCGA AGACCGCCATCGCCATGGAGGCGCACGCCGAGTGCGAGCGGGTGCTCCAGCGCATGGTGAACGGCGACAAGCTCTACCCG ATGTTCGTCACGCTATACCTCACAGGCCGCGATCGGACCGAGCTCGACGCCGCGATCTCGGAGGTGAATGCGCTGCTCGT TCCCACCGGAATGCGCTTCGTCGATCCGCGCCATGATCTGGTGCCGCTCGACAGCTTCGTGCGCGCGCTGCCCTTCAACT TCGATCCGGACTTCGACCAGCGGTACATGCTGCGCTCGCGTCTCACGTTCGCGAGCCACATCGCTGCGATCGCGCCCGTG TATGGCCGCTCCCGCGGCACGCCGCACCCCGGCATGTGGTACTGGAACCGCGGCGGCGAGCCGTTGTTCATGGACCCGCT CAACAAGCTCGACCGCAAGAAGAACGCGCATATGTTGGTGCTCGGGCCCACGGGCGCGGGCAAGTCGGCGACGCTGAACT ACCAGGCCATGTTCTCTATGGCCGTCCACCGACCGCGCCTGGTGATCGTCGACGCCGGCATGTCCTTCGACCTGCTGGTG AAGGACATGGCCGCCAAGGGCCTGTCGGTTCACCGGGTGCGGCTGACCATGGACTGTGAGGAGTCCTTGCCGCCGTTCGT GCACGGTGCCCGGCTGCTTCAGGACAAGGAGATCATGGATTCCTTCCATGCCGCAGAGAACCAGGCGAAGCGCAATGCGG GCCTGAGCGTGGACGAGGCGGCGGACGGCGGCAAGAGCTCGAAGATCATGGAGACTGTCGATACCGTGATCGAGGCCCAG GCAGCAGACACGGATAGCGACGACGACGGCGTTGATGAGAAGCGAGATCTGTTGGGCGAGATGCTGATCGCCGCCATCAT GATGATCACCGGAGGCGAGCCGGCAGAGGTCGCACGCATGAGCCGTGCCGACCGCTACCTCGTGACCCGGGCCATCATCA AGGCGGCGCTGCAGGCATCCAAGGACGGCCACAAGCATCCGCTGACCCAGGACGTCGCCATCGCGCTCATGGCGATGCAC AACGACCCGACCCTCTCGACGCACCGCCAGGCGCGCGCGGAAGAAATGGGGCAGTCGATGATGACGTTCACCCAGGGACT GCGTGGCAAGCTCTTCAACCGCTACGGCGGCGACTGGCCTGACGCCGACGTGACCCTGGTGGAGATGGGCACTCTCACGA AGGATGGCTATGGAGATGCGCTCGCCGTCGCCTACACCAGCCTGATCGATTCGGTCCAGTCGCGCGGCGAGCAGTTCCAG GACCAGGGCCGGCCGCTCATCATGCTGACCGACGAGGGCCACCTGATCACCACCAACGATCTGCTGGGCCCGAAGGTGGC CAAGGCCACCAAGATGTGGCGCAAGCTGAACATCTGGTTCTGGCTCGCTACGCAGAACCTGAAGGACTTCCCGGACAGCA TGGAGCGCGTGCTATCGATGTGCGAATTCTGGATGCTGCTCACAATGGACAAGTCGGAGATCGAGGAGGTGGCGCGCTTC CGTAATCTCACCCCCGAGCAGCGACACATGATGGAGTCGGCCGTGAAGGAGCCGCCCAAGTACACCGAGGGCGTGCTCAT CAGCGCGACCGGCCAGTGGTTGTTCCGGAACGTGCCGCCCGCTGTTCCCATCGCTCTCGCGATGACGGAAGGGCACGAGA AGGCACACCGTCGGCGCCTCATGGATGCCCACGGCTGTACCGAGCTCGATGCGGCCTACATGGTGGCCGAGAAGCTGGCG GAGGCACGGGCATGA
Upstream 100 bases:
>100_bases ACGAGCAGACGGAGTACGCCCTCCCCGGCGAGGTGCAGGAAGATCTGCAGCGCGGCCGCGCCGCCGTCCAGGGCCGCTCG CCCGCCGAAGGAGGCCGTCG
Downstream 100 bases:
>100_bases AGCGCAGGATCCTCATCGCCGCGGCCGTGTGTTCCGCCGGCGCCGTGTGGGCCCAGGGTGCTCCATCGGTCACCACGGTG GAGGTGTTCGCCAACAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 964; Mature: 964
Protein sequence:
>964_residues MKKWFDVLLGRSSSASGERAAPSPAASGAPGKPMTLADRRRMAARPPSFTELLPYVCYSPAEQVFAMRDGATLGAMFELS PVATEAQPLTYLQERARKVQEALQAIPEAEGSPWIVQFFLSDDRNVEILNQQLHDYILSQHKDNPRRAQEVISSEYTQSV LAEMRKHLDQVSRPQGLFTDTLVTGQVWRGQQRRVRCCIYRKFTGLANEPAEPIKQMEGAATTLFATFTEAGVTARRCNG RDFYEWLLPFFNRDVPWAPTPGELLQKAPYPGEMPEGMFDWDLAESLSLSQPRADVDAGLFEFDGVPVKALTLQNLRGQP AIGHFSAELTSGKESYARFDRLPPGSMLSMTVTVTPQHLVERKVERIRDKSRAKTAIAMEAHAECERVLQRMVNGDKLYP MFVTLYLTGRDRTELDAAISEVNALLVPTGMRFVDPRHDLVPLDSFVRALPFNFDPDFDQRYMLRSRLTFASHIAAIAPV YGRSRGTPHPGMWYWNRGGEPLFMDPLNKLDRKKNAHMLVLGPTGAGKSATLNYQAMFSMAVHRPRLVIVDAGMSFDLLV KDMAAKGLSVHRVRLTMDCEESLPPFVHGARLLQDKEIMDSFHAAENQAKRNAGLSVDEAADGGKSSKIMETVDTVIEAQ AADTDSDDDGVDEKRDLLGEMLIAAIMMITGGEPAEVARMSRADRYLVTRAIIKAALQASKDGHKHPLTQDVAIALMAMH NDPTLSTHRQARAEEMGQSMMTFTQGLRGKLFNRYGGDWPDADVTLVEMGTLTKDGYGDALAVAYTSLIDSVQSRGEQFQ DQGRPLIMLTDEGHLITTNDLLGPKVAKATKMWRKLNIWFWLATQNLKDFPDSMERVLSMCEFWMLLTMDKSEIEEVARF RNLTPEQRHMMESAVKEPPKYTEGVLISATGQWLFRNVPPAVPIALAMTEGHEKAHRRRLMDAHGCTELDAAYMVAEKLA EARA
Sequences:
>Translated_964_residues MKKWFDVLLGRSSSASGERAAPSPAASGAPGKPMTLADRRRMAARPPSFTELLPYVCYSPAEQVFAMRDGATLGAMFELS PVATEAQPLTYLQERARKVQEALQAIPEAEGSPWIVQFFLSDDRNVEILNQQLHDYILSQHKDNPRRAQEVISSEYTQSV LAEMRKHLDQVSRPQGLFTDTLVTGQVWRGQQRRVRCCIYRKFTGLANEPAEPIKQMEGAATTLFATFTEAGVTARRCNG RDFYEWLLPFFNRDVPWAPTPGELLQKAPYPGEMPEGMFDWDLAESLSLSQPRADVDAGLFEFDGVPVKALTLQNLRGQP AIGHFSAELTSGKESYARFDRLPPGSMLSMTVTVTPQHLVERKVERIRDKSRAKTAIAMEAHAECERVLQRMVNGDKLYP MFVTLYLTGRDRTELDAAISEVNALLVPTGMRFVDPRHDLVPLDSFVRALPFNFDPDFDQRYMLRSRLTFASHIAAIAPV YGRSRGTPHPGMWYWNRGGEPLFMDPLNKLDRKKNAHMLVLGPTGAGKSATLNYQAMFSMAVHRPRLVIVDAGMSFDLLV KDMAAKGLSVHRVRLTMDCEESLPPFVHGARLLQDKEIMDSFHAAENQAKRNAGLSVDEAADGGKSSKIMETVDTVIEAQ AADTDSDDDGVDEKRDLLGEMLIAAIMMITGGEPAEVARMSRADRYLVTRAIIKAALQASKDGHKHPLTQDVAIALMAMH NDPTLSTHRQARAEEMGQSMMTFTQGLRGKLFNRYGGDWPDADVTLVEMGTLTKDGYGDALAVAYTSLIDSVQSRGEQFQ DQGRPLIMLTDEGHLITTNDLLGPKVAKATKMWRKLNIWFWLATQNLKDFPDSMERVLSMCEFWMLLTMDKSEIEEVARF RNLTPEQRHMMESAVKEPPKYTEGVLISATGQWLFRNVPPAVPIALAMTEGHEKAHRRRLMDAHGCTELDAAYMVAEKLA EARA >Mature_964_residues MKKWFDVLLGRSSSASGERAAPSPAASGAPGKPMTLADRRRMAARPPSFTELLPYVCYSPAEQVFAMRDGATLGAMFELS PVATEAQPLTYLQERARKVQEALQAIPEAEGSPWIVQFFLSDDRNVEILNQQLHDYILSQHKDNPRRAQEVISSEYTQSV LAEMRKHLDQVSRPQGLFTDTLVTGQVWRGQQRRVRCCIYRKFTGLANEPAEPIKQMEGAATTLFATFTEAGVTARRCNG RDFYEWLLPFFNRDVPWAPTPGELLQKAPYPGEMPEGMFDWDLAESLSLSQPRADVDAGLFEFDGVPVKALTLQNLRGQP AIGHFSAELTSGKESYARFDRLPPGSMLSMTVTVTPQHLVERKVERIRDKSRAKTAIAMEAHAECERVLQRMVNGDKLYP MFVTLYLTGRDRTELDAAISEVNALLVPTGMRFVDPRHDLVPLDSFVRALPFNFDPDFDQRYMLRSRLTFASHIAAIAPV YGRSRGTPHPGMWYWNRGGEPLFMDPLNKLDRKKNAHMLVLGPTGAGKSATLNYQAMFSMAVHRPRLVIVDAGMSFDLLV KDMAAKGLSVHRVRLTMDCEESLPPFVHGARLLQDKEIMDSFHAAENQAKRNAGLSVDEAADGGKSSKIMETVDTVIEAQ AADTDSDDDGVDEKRDLLGEMLIAAIMMITGGEPAEVARMSRADRYLVTRAIIKAALQASKDGHKHPLTQDVAIALMAMH NDPTLSTHRQARAEEMGQSMMTFTQGLRGKLFNRYGGDWPDADVTLVEMGTLTKDGYGDALAVAYTSLIDSVQSRGEQFQ DQGRPLIMLTDEGHLITTNDLLGPKVAKATKMWRKLNIWFWLATQNLKDFPDSMERVLSMCEFWMLLTMDKSEIEEVARF RNLTPEQRHMMESAVKEPPKYTEGVLISATGQWLFRNVPPAVPIALAMTEGHEKAHRRRLMDAHGCTELDAAYMVAEKLA EARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107735; Mature: 107735
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWFDVLLGRSSSASGERAAPSPAASGAPGKPMTLADRRRMAARPPSFTELLPYVCYSP CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCC AEQVFAMRDGATLGAMFELSPVATEAQPLTYLQERARKVQEALQAIPEAEGSPWIVQFFL HHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SDDRNVEILNQQLHDYILSQHKDNPRRAQEVISSEYTQSVLAEMRKHLDQVSRPQGLFTD CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLVTGQVWRGQQRRVRCCIYRKFTGLANEPAEPIKQMEGAATTLFATFTEAGVTARRCNG HHHCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCC RDFYEWLLPFFNRDVPWAPTPGELLQKAPYPGEMPEGMFDWDLAESLSLSQPRADVDAGL CHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCC FEFDGVPVKALTLQNLRGQPAIGHFSAELTSGKESYARFDRLPPGSMLSMTVTVTPQHLV EECCCCCEEEEEHHCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCEEEEEEEECHHHHH ERKVERIRDKSRAKTAIAMEAHAECERVLQRMVNGDKLYPMFVTLYLTGRDRTELDAAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHH EVNALLVPTGMRFVDPRHDLVPLDSFVRALPFNFDPDFDQRYMLRSRLTFASHIAAIAPV HHCEEEEECCCEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YGRSRGTPHPGMWYWNRGGEPLFMDPLNKLDRKKNAHMLVLGPTGAGKSATLNYQAMFSM HCCCCCCCCCCCEEECCCCCEEEECHHHHHHHCCCCEEEEEECCCCCCCCEEHHHHHHHH AVHRPRLVIVDAGMSFDLLVKDMAAKGLSVHRVRLTMDCEESLPPFVHGARLLQDKEIMD HHCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHH SFHAAENQAKRNAGLSVDEAADGGKSSKIMETVDTVIEAQAADTDSDDDGVDEKRDLLGE HHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH MLIAAIMMITGGEPAEVARMSRADRYLVTRAIIKAALQASKDGHKHPLTQDVAIALMAMH HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC NDPTLSTHRQARAEEMGQSMMTFTQGLRGKLFNRYGGDWPDADVTLVEMGTLTKDGYGDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCH LAVAYTSLIDSVQSRGEQFQDQGRPLIMLTDEGHLITTNDLLGPKVAKATKMWRKLNIWF HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHEEEEE WLATQNLKDFPDSMERVLSMCEFWMLLTMDKSEIEEVARFRNLTPEQRHMMESAVKEPPK EEECCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC YTEGVLISATGQWLFRNVPPAVPIALAMTEGHEKAHRRRLMDAHGCTELDAAYMVAEKLA CCCCEEEEECCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EARA HCCC >Mature Secondary Structure MKKWFDVLLGRSSSASGERAAPSPAASGAPGKPMTLADRRRMAARPPSFTELLPYVCYSP CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCC AEQVFAMRDGATLGAMFELSPVATEAQPLTYLQERARKVQEALQAIPEAEGSPWIVQFFL HHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SDDRNVEILNQQLHDYILSQHKDNPRRAQEVISSEYTQSVLAEMRKHLDQVSRPQGLFTD CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLVTGQVWRGQQRRVRCCIYRKFTGLANEPAEPIKQMEGAATTLFATFTEAGVTARRCNG HHHCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCC RDFYEWLLPFFNRDVPWAPTPGELLQKAPYPGEMPEGMFDWDLAESLSLSQPRADVDAGL CHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCC FEFDGVPVKALTLQNLRGQPAIGHFSAELTSGKESYARFDRLPPGSMLSMTVTVTPQHLV EECCCCCEEEEEHHCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCEEEEEEEECHHHHH ERKVERIRDKSRAKTAIAMEAHAECERVLQRMVNGDKLYPMFVTLYLTGRDRTELDAAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHH EVNALLVPTGMRFVDPRHDLVPLDSFVRALPFNFDPDFDQRYMLRSRLTFASHIAAIAPV HHCEEEEECCCEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YGRSRGTPHPGMWYWNRGGEPLFMDPLNKLDRKKNAHMLVLGPTGAGKSATLNYQAMFSM HCCCCCCCCCCCEEECCCCCEEEECHHHHHHHCCCCEEEEEECCCCCCCCEEHHHHHHHH AVHRPRLVIVDAGMSFDLLVKDMAAKGLSVHRVRLTMDCEESLPPFVHGARLLQDKEIMD HHCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHH SFHAAENQAKRNAGLSVDEAADGGKSSKIMETVDTVIEAQAADTDSDDDGVDEKRDLLGE HHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH MLIAAIMMITGGEPAEVARMSRADRYLVTRAIIKAALQASKDGHKHPLTQDVAIALMAMH HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC NDPTLSTHRQARAEEMGQSMMTFTQGLRGKLFNRYGGDWPDADVTLVEMGTLTKDGYGDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCH LAVAYTSLIDSVQSRGEQFQDQGRPLIMLTDEGHLITTNDLLGPKVAKATKMWRKLNIWF HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHEEEEE WLATQNLKDFPDSMERVLSMCEFWMLLTMDKSEIEEVARFRNLTPEQRHMMESAVKEPPK EEECCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC YTEGVLISATGQWLFRNVPPAVPIALAMTEGHEKAHRRRLMDAHGCTELDAAYMVAEKLA CCCCEEEEECCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EARA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA