| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611411
Identifier: 120611411
GI number: 120611411
Start: 3020579
End: 3021385
Strand: Reverse
Name: 120611411
Synonym: Aave_2747
Alternate gene names: NA
Gene position: 3021385-3020579 (Counterclockwise)
Preceding gene: 120611412
Following gene: 120611398
Centisome position: 56.45
GC content: 64.56
Gene sequence:
>807_bases ATGAACGCCGTCCTCGAGCCGACTCTCTTCGCCGCGGCCGGCGCCGCGCCGACGCGGGTCACCTATTCGGAATTGCAGCA GGCCTATGACCACTTCAACGCGCGGCTCTTCGGTGGCCAACTACCTGGGTGCCTGATCACCCTGCAGCGGGAGAAACGCA CCTGCGGGTACTTCTCGGCCGCACGGTTCGCTTCGCTGGACGGCGGAACGACCGATGAGATCGCGATGAACCCGACCTAC TTTGCAGCCGTGCCGCTCATCGAGACCATGCAGACGATGGTCCATGAGATGTGCCATCTGTGGCAGCACCACTTTGGCAC GCCGGGCCGAGGGCGGTACCACAACGAGGAGTGGGCTTCCAAGATGGAGGCCGTTGGCCTCATGCCCTCCTCGACCGGTC AGCCTGGCGGGAAGCGCACGGGCGACATGATGGCCGACTATGCCCTGTCCGGCGGGCGTTTCTTGGAGGTCTGCGCCGAG TTGCTGACCTCCAGTTTTCAGCTGAGCTGGTACGACCGTTTTCCGGCAGAGGACCACGTGCGCCTCGGGCAGCAAGTGGC CGCTGCGTCGCATCTCTCTGGCCTGGCCGGCTCCAGGCCGCCGATGGAAACAGCTCCTGCGCTCGCGGGCGTTGTGCGGC CTGTCCGCGGTGCTTCTGGGTCTGGAGCCGACGGGGACGGCGCGGCGCCGGCCAACAAGTCCAACAGGCTGAAGTACACC TGCAGCAAGTGCCGTGTAAGTGTCTGGGGCAAGCCTGCCTTGAAAATTGTCTGTGGCGAATGCCAGTTGGCGTTCATTGC TCAGTAG
Upstream 100 bases:
>100_bases CGCGCACCATGGCTTCATCGCGCTGGTCGACGCGCCTAGCACCCTGTTTCTTCCGCTCGCGACGGTTCGCTAGGCCGCCG TCTAACTCTTCTCGCACCGC
Downstream 100 bases:
>100_bases AGGGAGCACTGTTGGTCGGCAGTTTTGTTATACAGCCTTTCGTGCCTGCCCAAAACGATGACGGCTGTGCAGCGGTTGTT GCGGTTCGTAAAGTCCGCTC
Product: zinc metalloproteinase Mpr protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNAVLEPTLFAAAGAAPTRVTYSELQQAYDHFNARLFGGQLPGCLITLQREKRTCGYFSAARFASLDGGTTDEIAMNPTY FAAVPLIETMQTMVHEMCHLWQHHFGTPGRGRYHNEEWASKMEAVGLMPSSTGQPGGKRTGDMMADYALSGGRFLEVCAE LLTSSFQLSWYDRFPAEDHVRLGQQVAAASHLSGLAGSRPPMETAPALAGVVRPVRGASGSGADGDGAAPANKSNRLKYT CSKCRVSVWGKPALKIVCGECQLAFIAQ
Sequences:
>Translated_268_residues MNAVLEPTLFAAAGAAPTRVTYSELQQAYDHFNARLFGGQLPGCLITLQREKRTCGYFSAARFASLDGGTTDEIAMNPTY FAAVPLIETMQTMVHEMCHLWQHHFGTPGRGRYHNEEWASKMEAVGLMPSSTGQPGGKRTGDMMADYALSGGRFLEVCAE LLTSSFQLSWYDRFPAEDHVRLGQQVAAASHLSGLAGSRPPMETAPALAGVVRPVRGASGSGADGDGAAPANKSNRLKYT CSKCRVSVWGKPALKIVCGECQLAFIAQ >Mature_268_residues MNAVLEPTLFAAAGAAPTRVTYSELQQAYDHFNARLFGGQLPGCLITLQREKRTCGYFSAARFASLDGGTTDEIAMNPTY FAAVPLIETMQTMVHEMCHLWQHHFGTPGRGRYHNEEWASKMEAVGLMPSSTGQPGGKRTGDMMADYALSGGRFLEVCAE LLTSSFQLSWYDRFPAEDHVRLGQQVAAASHLSGLAGSRPPMETAPALAGVVRPVRGASGSGADGDGAAPANKSNRLKYT CSKCRVSVWGKPALKIVCGECQLAFIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006640 [H]
Pfam domain/function: PF10263 SprT-like [H]
EC number: NA
Molecular weight: Translated: 28795; Mature: 28795
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVLEPTLFAAAGAAPTRVTYSELQQAYDHFNARLFGGQLPGCLITLQREKRTCGYFSA CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCCCHHHH ARFASLDGGTTDEIAMNPTYFAAVPLIETMQTMVHEMCHLWQHHFGTPGRGRYHNEEWAS HHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KMEAVGLMPSSTGQPGGKRTGDMMADYALSGGRFLEVCAELLTSSFQLSWYDRFPAEDHV HHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHCCCCHHHH RLGQQVAAASHLSGLAGSRPPMETAPALAGVVRPVRGASGSGADGDGAAPANKSNRLKYT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE CSKCRVSVWGKPALKIVCGECQLAFIAQ HHHCEEEECCCCCEEEEECCCCEEEECC >Mature Secondary Structure MNAVLEPTLFAAAGAAPTRVTYSELQQAYDHFNARLFGGQLPGCLITLQREKRTCGYFSA CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCCCHHHH ARFASLDGGTTDEIAMNPTYFAAVPLIETMQTMVHEMCHLWQHHFGTPGRGRYHNEEWAS HHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KMEAVGLMPSSTGQPGGKRTGDMMADYALSGGRFLEVCAELLTSSFQLSWYDRFPAEDHV HHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHCCCCHHHH RLGQQVAAASHLSGLAGSRPPMETAPALAGVVRPVRGASGSGADGDGAAPANKSNRLKYT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE CSKCRVSVWGKPALKIVCGECQLAFIAQ HHHCEEEECCCCCEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA