Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611398

Identifier: 120611398

GI number: 120611398

Start: 3003191

End: 3003943

Strand: Reverse

Name: 120611398

Synonym: Aave_2734

Alternate gene names: NA

Gene position: 3003943-3003191 (Counterclockwise)

Preceding gene: 120611411

Following gene: 120611397

Centisome position: 56.12

GC content: 68.39

Gene sequence:

>753_bases
TTGACACTCGACTCTCTCCCCCGCGGCGTATGGCGAGCCACGGAAATGCCGGATGCTCATGGTGCAACGCTTCCCACAGG
GCATGCGGTGCTCGACGCGGCCCTGCCTGGCGCTGGATGGCCTCTGCGAGCGGTCATCGATGTGCTGCAACCACAGCCTG
GGGTGGCAGAGCTCCGCCTTCTCAGCCCTGCCCTGGCTGCGGTCGCGGCGACGGGCGAGGACCTGGTGCTGGTGGGGCCT
CCGATGCCACCCCACCCTGCGGGCATTCAGCAGTTGGGCATCGACGCATGCCGGGTCACGTGGATCGCAGCGGATACACC
GCTCGACAGGCTGTGGACGGTGGAGCAGTTGGTACGGGCCGGCAGCTCAGGTGCAATAGTGGCTTGGCTGCCTCGCGCCC
GGGGGGATCAGATTCGTCGCCTGCAGGTGTGTGCTCAAGACTGCGCCGGGCCCGTGTTCCTCGTGAGGCCGGCCGAGGTG
GCTCGCGAGCCCTCGGCGGCTCCGCTACGGGTATTGCTGGAGCCTGCGCTCGACTGGGAGATCCACCTGCAGCTGCTCAA
GTGCCGCGGTAGCGTCAGCGGTATTCGCCTCACGATACCGACCGTCCCTCCTGCCATCGAGCCCATCTTGACTGCGCGCA
GTCGCCGTCCGGCGGCTCTCATCGCCTCGCGCAGAACCGCACAGCCGCCTGCCAGTGGCCGGACACCCTCCCATGCTGTG
GATCGCACTGCTCCCCTCCGCGCCGGCGTCTAG

Upstream 100 bases:

>100_bases
TCGAGGTCTCTACGAGGATTCCACATCATGCTGACCTGGGCTTCGGTAAATCCGCGATACTGTATAAATAATCAGTATTT
AGCGCATACAGAGGCCTGCC

Downstream 100 bases:

>100_bases
CACTCTCGCAGGCCTCGGGCTGTGGTGCCTGCAGTTCACGCCAAGGGTCGCCATCGCGGAACCGGCTTCTTCCAGGCCGG
CTGTGGTCTTCGAAATCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTLDSLPRGVWRATEMPDAHGATLPTGHAVLDAALPGAGWPLRAVIDVLQPQPGVAELRLLSPALAAVAATGEDLVLVGP
PMPPHPAGIQQLGIDACRVTWIAADTPLDRLWTVEQLVRAGSSGAIVAWLPRARGDQIRRLQVCAQDCAGPVFLVRPAEV
AREPSAAPLRVLLEPALDWEIHLQLLKCRGSVSGIRLTIPTVPPAIEPILTARSRRPAALIASRRTAQPPASGRTPSHAV
DRTAPLRAGV

Sequences:

>Translated_250_residues
MTLDSLPRGVWRATEMPDAHGATLPTGHAVLDAALPGAGWPLRAVIDVLQPQPGVAELRLLSPALAAVAATGEDLVLVGP
PMPPHPAGIQQLGIDACRVTWIAADTPLDRLWTVEQLVRAGSSGAIVAWLPRARGDQIRRLQVCAQDCAGPVFLVRPAEV
AREPSAAPLRVLLEPALDWEIHLQLLKCRGSVSGIRLTIPTVPPAIEPILTARSRRPAALIASRRTAQPPASGRTPSHAV
DRTAPLRAGV
>Mature_249_residues
TLDSLPRGVWRATEMPDAHGATLPTGHAVLDAALPGAGWPLRAVIDVLQPQPGVAELRLLSPALAAVAATGEDLVLVGPP
MPPHPAGIQQLGIDACRVTWIAADTPLDRLWTVEQLVRAGSSGAIVAWLPRARGDQIRRLQVCAQDCAGPVFLVRPAEVA
REPSAAPLRVLLEPALDWEIHLQLLKCRGSVSGIRLTIPTVPPAIEPILTARSRRPAALIASRRTAQPPASGRTPSHAVD
RTAPLRAGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26412; Mature: 26281

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDSLPRGVWRATEMPDAHGATLPTGHAVLDAALPGAGWPLRAVIDVLQPQPGVAELRL
CCCCHHCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHH
LSPALAAVAATGEDLVLVGPPMPPHPAGIQQLGIDACRVTWIAADTPLDRLWTVEQLVRA
HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHC
GSSGAIVAWLPRARGDQIRRLQVCAQDCAGPVFLVRPAEVAREPSAAPLRVLLEPALDWE
CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCHHEECCCCCCHH
IHLQLLKCRGSVSGIRLTIPTVPPAIEPILTARSRRPAALIASRRTAQPPASGRTPSHAV
HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHH
DRTAPLRAGV
CCCCCCCCCC
>Mature Secondary Structure 
TLDSLPRGVWRATEMPDAHGATLPTGHAVLDAALPGAGWPLRAVIDVLQPQPGVAELRL
CCCHHCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHH
LSPALAAVAATGEDLVLVGPPMPPHPAGIQQLGIDACRVTWIAADTPLDRLWTVEQLVRA
HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHC
GSSGAIVAWLPRARGDQIRRLQVCAQDCAGPVFLVRPAEVAREPSAAPLRVLLEPALDWE
CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCHHEECCCCCCHH
IHLQLLKCRGSVSGIRLTIPTVPPAIEPILTARSRRPAALIASRRTAQPPASGRTPSHAV
HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHH
DRTAPLRAGV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA