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The map label for this gene is tse [H]

Identifier: 120610785

GI number: 120610785

Start: 2313670

End: 2315223

Strand: Reverse

Name: tse [H]

Synonym: Aave_2108

Alternate gene names: 120610785

Gene position: 2315223-2313670 (Counterclockwise)

Preceding gene: 120610787

Following gene: 120610784

Centisome position: 43.25

GC content: 67.89

Gene sequence:

>1554_bases
ATGAAGCTTTCCACGCGCATAGCCCTGGCCTACGTGCTCATCGTCACCCTTCTCGTGACCGTGTGCGGCTACTCCGCCCG
GCGCACGAGCGCATTGGCAGACGTCGCGGACCGCATCGCCAGCGAGCGGATCGCACGGCTGGAGAAATTGCAACTTCTGC
GGAACAACTTCAATGCCCAGGGCCACCAGCTGCGCAATGTCCTCATCAGCCAGGACCGCGCCTTCCAGCAGGCCGAGCTC
AAGAAATCGGACGCGATCAAGACCACCAACAAGAATGTCCTGTCGGAGATCCTGCGGGCAGAAACCGATGAGACAGCGCG
CCAGCGCCTGCAGGAGGTGGCCGGCTTCATCGATGCGTTCAATGCCGAAATCGACAACACGTCGCGTCTGGCATTGCAGG
GCTCCCTGGACGAAGCGCGCAAGAACCTCATCGGGCCCATGCGCGACCGCCAGATGCCGCTTTTCAAGGCCGTGGACGAG
AGCGTCAAGCGGCAGGTGGAACTGTCGGAGGCGCTCGCGCTGCAGGCGCGCAAGGATGCGCACCTCACCGCATGGCTCAC
CATGGCTCTGGGCGGCCTCGGGACGGTACTGGCGGTCGGCGCATGCTGGTGGATCGTGCGCAGCGTCAGGCTGTCGCTGG
GCGGCGAACCCGCGGACCTGGGCGGCGCCGCGCGCCGCGTGGCCGGCGGTGACCTGACGCCGATTCCGCTGCCCAGCGGG
ACCCATCCGGACAGCGTTTTCGCATCGATCGCGGCCATGCAGCAGAGCCTGCACGGCATCGTCATGAAAGTGCGGGACGT
CGCGGACTCGATATCCACCGGCGCCACGCAGATCGCCGCGGGCAGTTCCAACCTCAGCCAGCAGACCGAGGGCCAGGCCG
GCGCCCTGCAGGAGACCTCGGCCACCATGGATGCGCTGACCGAGACAGTGCGCTCCAACGCGGATCACACCCGGACCGCC
AGCCAGCTCGCCCAGGAAGCGGCAGAGGTGGCGCTGAAGGGCCGCGATGCCGTCTCCCGCGTGGTCGAGGCCATGAGCGG
CATCGACGGGAGTTCATCGCGCATCGGCGACATCATCGGCGTGATCGACGGCATTGCCTTCCAGACCAACATCCTCGCGC
TGAATGCCGCCGTGGAGGCTGCCCGGGCCGGGGAGGACGGCCGGGGTTTCGCCGTGGTCGCGGCGGAGGTCAGAAGCCTG
GCCCAGCGCAGCGCGGCCGCCGCGCGGGAGATCAGGGACCTCATCCAGAGCAGCCAGGGGCAGGTTCGCAACGGGTCCTC
GATCGCCAGCGAGTCGGGCGATGCCATGCGGGAGATCGAGGCGGCCGTGTCCCGCATGGCCGTGGTCGTGACGGAAATCA
GTGCCGCCACATCGGACCAGAGCGACGGCATCGCGCAGGTCGGCACGACGATAGGGCAGCTGGAGGACTCCACGCAGCGC
AATGCCGCCTTGGCCGAGGAAAGCGCTGCGGCCGCCCGCAGCCTCGAGCAGCAGGCCGTGGCGCTGATGGAAGCGGTTTC
CCTCTTCCGCCTCCACGCCGGCACCTCGACCTGA

Upstream 100 bases:

>100_bases
GAAGCCCGTTTCAGTTCTGCGTGGCATTTTTGCCAAAGTCATTCAATATTTTTCTCAATTTTGTTACATTAATCCTGATA
CAGCCCCTCCCCCTTACGTC

Downstream 100 bases:

>100_bases
CGACGAGGCGAGGTCGCCCGGCGCATCACCTCGCACCCCGGGATTTCCGCTCAAGGCAGCATGCACCAGGGCGGGGCGAT
GCACCGAAGCGGTTCACGCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKLSTRIALAYVLIVTLLVTVCGYSARRTSALADVADRIASERIARLEKLQLLRNNFNAQGHQLRNVLISQDRAFQQAEL
KKSDAIKTTNKNVLSEILRAETDETARQRLQEVAGFIDAFNAEIDNTSRLALQGSLDEARKNLIGPMRDRQMPLFKAVDE
SVKRQVELSEALALQARKDAHLTAWLTMALGGLGTVLAVGACWWIVRSVRLSLGGEPADLGGAARRVAGGDLTPIPLPSG
THPDSVFASIAAMQQSLHGIVMKVRDVADSISTGATQIAAGSSNLSQQTEGQAGALQETSATMDALTETVRSNADHTRTA
SQLAQEAAEVALKGRDAVSRVVEAMSGIDGSSSRIGDIIGVIDGIAFQTNILALNAAVEAARAGEDGRGFAVVAAEVRSL
AQRSAAAAREIRDLIQSSQGQVRNGSSIASESGDAMREIEAAVSRMAVVVTEISAATSDQSDGIAQVGTTIGQLEDSTQR
NAALAEESAAAARSLEQQAVALMEAVSLFRLHAGTST

Sequences:

>Translated_517_residues
MKLSTRIALAYVLIVTLLVTVCGYSARRTSALADVADRIASERIARLEKLQLLRNNFNAQGHQLRNVLISQDRAFQQAEL
KKSDAIKTTNKNVLSEILRAETDETARQRLQEVAGFIDAFNAEIDNTSRLALQGSLDEARKNLIGPMRDRQMPLFKAVDE
SVKRQVELSEALALQARKDAHLTAWLTMALGGLGTVLAVGACWWIVRSVRLSLGGEPADLGGAARRVAGGDLTPIPLPSG
THPDSVFASIAAMQQSLHGIVMKVRDVADSISTGATQIAAGSSNLSQQTEGQAGALQETSATMDALTETVRSNADHTRTA
SQLAQEAAEVALKGRDAVSRVVEAMSGIDGSSSRIGDIIGVIDGIAFQTNILALNAAVEAARAGEDGRGFAVVAAEVRSL
AQRSAAAAREIRDLIQSSQGQVRNGSSIASESGDAMREIEAAVSRMAVVVTEISAATSDQSDGIAQVGTTIGQLEDSTQR
NAALAEESAAAARSLEQQAVALMEAVSLFRLHAGTST
>Mature_517_residues
MKLSTRIALAYVLIVTLLVTVCGYSARRTSALADVADRIASERIARLEKLQLLRNNFNAQGHQLRNVLISQDRAFQQAEL
KKSDAIKTTNKNVLSEILRAETDETARQRLQEVAGFIDAFNAEIDNTSRLALQGSLDEARKNLIGPMRDRQMPLFKAVDE
SVKRQVELSEALALQARKDAHLTAWLTMALGGLGTVLAVGACWWIVRSVRLSLGGEPADLGGAARRVAGGDLTPIPLPSG
THPDSVFASIAAMQQSLHGIVMKVRDVADSISTGATQIAAGSSNLSQQTEGQAGALQETSATMDALTETVRSNADHTRTA
SQLAQEAAEVALKGRDAVSRVVEAMSGIDGSSSRIGDIIGVIDGIAFQTNILALNAAVEAARAGEDGRGFAVVAAEVRSL
AQRSAAAAREIRDLIQSSQGQVRNGSSIASESGDAMREIEAAVSRMAVVVTEISAATSDQSDGIAQVGTTIGQLEDSTQR
NAALAEESAAAARSLEQQAVALMEAVSLFRLHAGTST

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=329, Percent_Identity=49.5440729483283, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1788194, Length=343, Percent_Identity=42.8571428571429, Blast_Score=241, Evalue=1e-64,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=48.8958990536278, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1787690, Length=288, Percent_Identity=49.6527777777778, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=40.4, Blast_Score=171, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 54531; Mature: 54531

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTRIALAYVLIVTLLVTVCGYSARRTSALADVADRIASERIARLEKLQLLRNNFNAQ
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHQLRNVLISQDRAFQQAELKKSDAIKTTNKNVLSEILRAETDETARQRLQEVAGFIDAF
HHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NAEIDNTSRLALQGSLDEARKNLIGPMRDRQMPLFKAVDESVKRQVELSEALALQARKDA
CCCCCCCCCEEEECCHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HLTAWLTMALGGLGTVLAVGACWWIVRSVRLSLGGEPADLGGAARRVAGGDLTPIPLPSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC
THPDSVFASIAAMQQSLHGIVMKVRDVADSISTGATQIAAGSSNLSQQTEGQAGALQETS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHCCCCCCHHHHH
ATMDALTETVRSNADHTRTASQLAQEAAEVALKGRDAVSRVVEAMSGIDGSSSRIGDIIG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHH
VIDGIAFQTNILALNAAVEAARAGEDGRGFAVVAAEVRSLAQRSAAAAREIRDLIQSSQG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QVRNGSSIASESGDAMREIEAAVSRMAVVVTEISAATSDQSDGIAQVGTTIGQLEDSTQR
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
NAALAEESAAAARSLEQQAVALMEAVSLFRLHAGTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLSTRIALAYVLIVTLLVTVCGYSARRTSALADVADRIASERIARLEKLQLLRNNFNAQ
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHQLRNVLISQDRAFQQAELKKSDAIKTTNKNVLSEILRAETDETARQRLQEVAGFIDAF
HHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NAEIDNTSRLALQGSLDEARKNLIGPMRDRQMPLFKAVDESVKRQVELSEALALQARKDA
CCCCCCCCCEEEECCHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HLTAWLTMALGGLGTVLAVGACWWIVRSVRLSLGGEPADLGGAARRVAGGDLTPIPLPSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC
THPDSVFASIAAMQQSLHGIVMKVRDVADSISTGATQIAAGSSNLSQQTEGQAGALQETS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHCCCCCCHHHHH
ATMDALTETVRSNADHTRTASQLAQEAAEVALKGRDAVSRVVEAMSGIDGSSSRIGDIIG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHH
VIDGIAFQTNILALNAAVEAARAGEDGRGFAVVAAEVRSLAQRSAAAAREIRDLIQSSQG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QVRNGSSIASESGDAMREIEAAVSRMAVVVTEISAATSDQSDGIAQVGTTIGQLEDSTQR
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
NAALAEESAAAARSLEQQAVALMEAVSLFRLHAGTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]