| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ydjK [H]
Identifier: 120610763
GI number: 120610763
Start: 2288153
End: 2289658
Strand: Reverse
Name: ydjK [H]
Synonym: Aave_2085
Alternate gene names: 120610763
Gene position: 2289658-2288153 (Counterclockwise)
Preceding gene: 120610764
Following gene: 120610761
Centisome position: 42.78
GC content: 71.38
Gene sequence:
>1506_bases ATGTCCCCCGGCAGCGATATCCCCGCCCGTCTCGATCGGCTTCCCTGGTCCGCCTGGCACTGGCGCGTGGTGATCGCGCT GGGCATCGCCTGGGTGCTCGACGGGCTGGAAGTGACCATCGTCGGCTCCCTGGGCAGCGCGCTGGAGCGCCCCGACACGC TGGGGCTGACGGCGTCGCAGGTGGGCTGGACGGCCTCGCTGTACGTGGCCGGCGCGGTGATCGGTGCCCTCGTGTTCGGC CGCATGGCGGACGCGCTGGGGCGCAAGCGCCTCTTCATGCTGACCCTGACGGTGTACATGGTGGCGACCGTGGCCACGGC CTTCACCAGCAGTTTCGCCGCGTTCGCGGTGTGCCGCTTCCTGACGGGCATCGGCATCGGCGGTGAATACGCGGCGATCA ATTCCGCCATCGACGAACTCATTCCCGCACGGGTGCGCGGCCGCGTGAACCTGGCCATCAACGGCAGTTTCTGGCTGGGC GCGGCCCTGGGGGCCGCCCTGAGCCTGGTGCTGCTGGACGCGCGCGTGCTGGGCCCGGAGTACGGCTGGCGGGCCGCCTT CCTCATGGGCGCTCTGCTGGGCGCCGCCGTGCTGCTGGTGCGACGGCACGTGCCGGAAAGCCCGCGCTGGCTGATCACCC ACGGCCGCGCCGACGAGGCCGAACGCATCGTGGCGGACATCGAGCGCGGCGTGCATGGCACAACGAATCCGCGCCCAGCC GGGCCCGCGGCCGCGGCCGCCCCCGCCATGCCCCGCGCGACCCCGGAAGTCCCGGCCGGCGCGGCTGGCCCGGCAGAACC GCCTGGCCGCCGCACGCTGCCCTCCGCGTCGCAGGTGGTCCAGGTGCTGCTGCGCCGCTACCCGGAGCGCAGCGCCGTGG TGCTGGCGCTGATGGTGTCGCAGGCGTTCTTCTACAACGCGATCTTCTTCACCTACGCGCTGGTGCTGACGCGCTTCTAC GGCGTGGACGCCAGCCGGGTGGGCCTCTACATCTTCCCCTTCGCCGCCGGGAACGTGCTGGGCCCGCTGCTGCTGGGGCC CCTCTTCGACCGCATCGGGCGGCGCGTGATGATTACCGCCACCTATGCGCTCGCGGGCATCGCGCTTGCGCTCACCGGCC TGGGCTTCATGAACGGCTGGCTGGATGCGACCACGCAGACCGTGGCCTGGTCGGTGGTGTTCTTCCTGGCCTCGGCCGCC GCGAGTTCCGCGTACCTCACCGTGAGCGAGGTGTTCCCGCTGGAGATGCGCGCGCTGGCGATTTCCCTCTTCTACGCCGT GGGCACCGGCGTGGGCGGTTTCGCGGCCCCGGCCCTGTTCGGCGCGCTGATCGATACCGGCAGCCGGGAGAACGTGTTCA TGGGTTACCTGCTCGGCGCGGCGCTGGTGCTGCTGGCGGCGGGCGTGACGTGGCGCTGGGCGGTGGATGCGGAGCGGAAA TCGCTGGAAGAGATCGCGCCGCCGCTGGGAAGCGACGGCAACGGTGATTCGTTGAATCGCCGTTGA
Upstream 100 bases:
>100_bases GGCGGGGTTGGACGGCTCCTGCCCCGCCGCGGCCCCCTGACGCCGACATTTGCGCCCGCCTCCTACGGCGGCCCCATCGG CGCGCACGTATGGTGCCGCC
Downstream 100 bases:
>100_bases TGCGTCGTTGCCGGCGCACTCCCGTCTCCGCGCCCCGGCCGCCCTGCCCTGCAGTCACTTGCCCGTCTCCCTCAGGCATT CCACCAGCGCCTCCGTCACC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSPGSDIPARLDRLPWSAWHWRVVIALGIAWVLDGLEVTIVGSLGSALERPDTLGLTASQVGWTASLYVAGAVIGALVFG RMADALGRKRLFMLTLTVYMVATVATAFTSSFAAFAVCRFLTGIGIGGEYAAINSAIDELIPARVRGRVNLAINGSFWLG AALGAALSLVLLDARVLGPEYGWRAAFLMGALLGAAVLLVRRHVPESPRWLITHGRADEAERIVADIERGVHGTTNPRPA GPAAAAAPAMPRATPEVPAGAAGPAEPPGRRTLPSASQVVQVLLRRYPERSAVVLALMVSQAFFYNAIFFTYALVLTRFY GVDASRVGLYIFPFAAGNVLGPLLLGPLFDRIGRRVMITATYALAGIALALTGLGFMNGWLDATTQTVAWSVVFFLASAA ASSAYLTVSEVFPLEMRALAISLFYAVGTGVGGFAAPALFGALIDTGSRENVFMGYLLGAALVLLAAGVTWRWAVDAERK SLEEIAPPLGSDGNGDSLNRR
Sequences:
>Translated_501_residues MSPGSDIPARLDRLPWSAWHWRVVIALGIAWVLDGLEVTIVGSLGSALERPDTLGLTASQVGWTASLYVAGAVIGALVFG RMADALGRKRLFMLTLTVYMVATVATAFTSSFAAFAVCRFLTGIGIGGEYAAINSAIDELIPARVRGRVNLAINGSFWLG AALGAALSLVLLDARVLGPEYGWRAAFLMGALLGAAVLLVRRHVPESPRWLITHGRADEAERIVADIERGVHGTTNPRPA GPAAAAAPAMPRATPEVPAGAAGPAEPPGRRTLPSASQVVQVLLRRYPERSAVVLALMVSQAFFYNAIFFTYALVLTRFY GVDASRVGLYIFPFAAGNVLGPLLLGPLFDRIGRRVMITATYALAGIALALTGLGFMNGWLDATTQTVAWSVVFFLASAA ASSAYLTVSEVFPLEMRALAISLFYAVGTGVGGFAAPALFGALIDTGSRENVFMGYLLGAALVLLAAGVTWRWAVDAERK SLEEIAPPLGSDGNGDSLNRR >Mature_500_residues SPGSDIPARLDRLPWSAWHWRVVIALGIAWVLDGLEVTIVGSLGSALERPDTLGLTASQVGWTASLYVAGAVIGALVFGR MADALGRKRLFMLTLTVYMVATVATAFTSSFAAFAVCRFLTGIGIGGEYAAINSAIDELIPARVRGRVNLAINGSFWLGA ALGAALSLVLLDARVLGPEYGWRAAFLMGALLGAAVLLVRRHVPESPRWLITHGRADEAERIVADIERGVHGTTNPRPAG PAAAAAPAMPRATPEVPAGAAGPAEPPGRRTLPSASQVVQVLLRRYPERSAVVLALMVSQAFFYNAIFFTYALVLTRFYG VDASRVGLYIFPFAAGNVLGPLLLGPLFDRIGRRVMITATYALAGIALALTGLGFMNGWLDATTQTVAWSVVFFLASAAA SSAYLTVSEVFPLEMRALAISLFYAVGTGVGGFAAPALFGALIDTGSRENVFMGYLLGAALVLLAAGVTWRWAVDAERKS LEEIAPPLGSDGNGDSLNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI7662270, Length=259, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI262399383, Length=199, Percent_Identity=30.1507537688442, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI216548223, Length=237, Percent_Identity=27.8481012658228, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI24497497, Length=390, Percent_Identity=28.4615384615385, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI90669191, Length=390, Percent_Identity=28.4615384615385, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI73695465, Length=252, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI11415038, Length=391, Percent_Identity=26.0869565217391, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI166197673, Length=189, Percent_Identity=29.1005291005291, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI166064021, Length=381, Percent_Identity=24.9343832020997, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI24308167, Length=225, Percent_Identity=27.5555555555556, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1788074, Length=467, Percent_Identity=27.4089935760171, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1786229, Length=461, Percent_Identity=26.0303687635575, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788068, Length=498, Percent_Identity=24.0963855421687, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87082159, Length=217, Percent_Identity=28.110599078341, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082231, Length=233, Percent_Identity=26.6094420600858, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87082404, Length=183, Percent_Identity=27.8688524590164, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1789207, Length=204, Percent_Identity=29.9019607843137, Blast_Score=62, Evalue=1e-10, Organism=Caenorhabditis elegans, GI71986689, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193202825, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193209824, Length=357, Percent_Identity=24.3697478991597, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32564663, Length=472, Percent_Identity=22.6694915254237, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565976, Length=392, Percent_Identity=22.9591836734694, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71984734, Length=175, Percent_Identity=27.4285714285714, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319718, Length=312, Percent_Identity=25.6410256410256, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323512, Length=483, Percent_Identity=24.6376811594203, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321334, Length=333, Percent_Identity=21.6216216216216, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323653, Length=404, Percent_Identity=24.5049504950495, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6320766, Length=440, Percent_Identity=22.0454545454545, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6324400, Length=440, Percent_Identity=22.0454545454545, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6322618, Length=440, Percent_Identity=21.5909090909091, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319956, Length=444, Percent_Identity=22.0720720720721, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320549, Length=446, Percent_Identity=23.3183856502242, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320550, Length=446, Percent_Identity=23.3183856502242, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320595, Length=534, Percent_Identity=20.2247191011236, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323110, Length=465, Percent_Identity=22.1505376344086, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24640198, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24640196, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24640200, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24649618, Length=386, Percent_Identity=25.9067357512953, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI221330907, Length=173, Percent_Identity=30.0578034682081, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355657, Length=366, Percent_Identity=25.9562841530055, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52833; Mature: 52702
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGSDIPARLDRLPWSAWHWRVVIALGIAWVLDGLEVTIVGSLGSALERPDTLGLTASQ CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCCHHH VGWTASLYVAGAVIGALVFGRMADALGRKRLFMLTLTVYMVATVATAFTSSFAAFAVCRF CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGIGIGGEYAAINSAIDELIPARVRGRVNLAINGSFWLGAALGAALSLVLLDARVLGPE HHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC YGWRAAFLMGALLGAAVLLVRRHVPESPRWLITHGRADEAERIVADIERGVHGTTNPRPA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC GPAAAAAPAMPRATPEVPAGAAGPAEPPGRRTLPSASQVVQVLLRRYPERSAVVLALMVS CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH QAFFYNAIFFTYALVLTRFYGVDASRVGLYIFPFAAGNVLGPLLLGPLFDRIGRRVMITA HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEH TYALAGIALALTGLGFMNGWLDATTQTVAWSVVFFLASAAASSAYLTVSEVFPLEMRALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHH ISLFYAVGTGVGGFAAPALFGALIDTGSRENVFMGYLLGAALVLLAAGVTWRWAVDAERK HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHH SLEEIAPPLGSDGNGDSLNRR HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SPGSDIPARLDRLPWSAWHWRVVIALGIAWVLDGLEVTIVGSLGSALERPDTLGLTASQ CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCCHHH VGWTASLYVAGAVIGALVFGRMADALGRKRLFMLTLTVYMVATVATAFTSSFAAFAVCRF CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGIGIGGEYAAINSAIDELIPARVRGRVNLAINGSFWLGAALGAALSLVLLDARVLGPE HHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC YGWRAAFLMGALLGAAVLLVRRHVPESPRWLITHGRADEAERIVADIERGVHGTTNPRPA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC GPAAAAAPAMPRATPEVPAGAAGPAEPPGRRTLPSASQVVQVLLRRYPERSAVVLALMVS CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH QAFFYNAIFFTYALVLTRFYGVDASRVGLYIFPFAAGNVLGPLLLGPLFDRIGRRVMITA HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEH TYALAGIALALTGLGFMNGWLDATTQTVAWSVVFFLASAAASSAYLTVSEVFPLEMRALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHH ISLFYAVGTGVGGFAAPALFGALIDTGSRENVFMGYLLGAALVLLAAGVTWRWAVDAERK HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHH SLEEIAPPLGSDGNGDSLNRR HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]