Click here to switch to the map view.

The map label for this gene is ygaK [H]

Identifier: 120610723

GI number: 120610723

Start: 2231102

End: 2232574

Strand: Reverse

Name: ygaK [H]

Synonym: Aave_2044

Alternate gene names: 120610723

Gene position: 2232574-2231102 (Counterclockwise)

Preceding gene: 120610724

Following gene: 120610715

Centisome position: 41.71

GC content: 67.35

Gene sequence:

>1473_bases
ATGGCCCAACGAAAGAGTCCTGCCCGCCTTGCCAAAGACCGGCGCGTCGCGCATCTGCGCGGCCTCGCCGCCGCCAACGC
ATCGGCCGGCACCCCGTGGCCGTGGGACGCGCTGATCGCGCTCGAGGATGGGCTGGTCGGGCGGGCCGTGCTGCCCGACA
GTCCGGACTACACCCAGGCCCGGCAGGAATCGAACCCTGCGTTCCAGGCCTATCCGCTGCTCATCATCTATTGCGAGTGC
GAAGACGACGTGATGTCGAGCCTGGCCTTCGCCAGGACCTGGAAAGCCTGGGTCGCGGTCCGCTGCGGAGGCCACAGCAC
GGCCGGCTACTCCGTCAACCAGATGGGCGTGGTGATCGACCTGAGCGATCTCGGCGGCGTGACGATCGACCCGGGCGCCG
GACGGGTGCACGTGCTGCCGGGCACGGATTTCGACCATTTCAACGGCGCCATGGGCGCGACGGGCTGGCACGTGCCGACG
GGCGCCTGCGGCAATGTCTGCGTGGGAGGCTTCGTGCAGGGCGGGGGCTACGGCTACACGTCGCGCGCGTACGGCATCCA
GAGCGACCTGGTGGAATCGATGCGCGTGGCCCTGGCCGACGGCCGGATCGTGACGGCCAGCGCGACGGAGAACGCCGAAC
TGTACTGGGCCATGCGCGGCGGCACGGGCGGCAACTTCGGGGTGCTGCTGCAGGTCACCTACCGCATGGTGCGTCTGCCG
CACGTCTGGGCCTGGGCCATTTCCTGGGAAGCCGCCGACGCCGCCGACGTGCTGGTGCTGCTGCAGCAGAAGTTCATGCG
CACCGGCGCGCCGGACGAACTGGGCTACATGATGAACCTGGGTTTCCGCGACGGACAGCCGGTGTTCATGATCCAGGGCA
TGTACTGCGGTTCGCGCGCCGACGGCATGGCGGCCATCGACGCATTGCTGAAGTTTCCGACGGCCAGGCTGCTGGTGGAC
CGCAGCGGCAGCTATCCCGCCATGAACCGGTACCTGGACGACCACCCCTACGACCTGCCCCAGGGCCTGACGGAAGGCAC
CTGCGAAAGCAAGGCCTGCGGCTACCTGGACAGGCAGCTGACCAAGGCGCAATGGCAGGCGGTGATCGACTACTTCGCCA
CGTCGCCCAACACGTATTCGATGGCCTACCTGGAGCCCTATGGCGGGGCGATCGCGCGCTACCCGGTGGAGAGCAGCGCT
TTCATCCACCGCCAAGTGGACGCGGATTTCGTGATGGACGTGTTCTGGACCCGGCCGGAAGACCGCGCGACGGTGCAAAA
CTGGCTGGCGGGATTCCAGGCCCTGGTGCGCCCGCTGCTGACCGGCAAGGTGTACCAGAACTATCCGGACGGCTCGCTGC
AGAACTACGTGGATGCCTACTGGAACCAGGATGTGTACGCGCGGCTCCAGGGCGTCAAGCGGGCCTACGATCCGGACAAC
TTCTTCCACTTCGCGCAGAGCGTGAAGCCGTAG

Upstream 100 bases:

>100_bases
AGGCGGCGCTCCGTTTTCCGCGGGTCGCCCGCAGCCCTGGCTCCTGCAGACCCGCGCCACGTCCGAGCCTGCCACCTGAT
CCAAACGAGGGAATCCCACG

Downstream 100 bases:

>100_bases
GCGCGGACGCGGGGCGGGCGTCCCCCCGCCCTTCAGCCCTGGCCCGCGTAGCGCATGCAGCCGCGGCCGGTACGCTTGGC
GGCGTACATGGCCTGGTCGG

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MAQRKSPARLAKDRRVAHLRGLAAANASAGTPWPWDALIALEDGLVGRAVLPDSPDYTQARQESNPAFQAYPLLIIYCEC
EDDVMSSLAFARTWKAWVAVRCGGHSTAGYSVNQMGVVIDLSDLGGVTIDPGAGRVHVLPGTDFDHFNGAMGATGWHVPT
GACGNVCVGGFVQGGGYGYTSRAYGIQSDLVESMRVALADGRIVTASATENAELYWAMRGGTGGNFGVLLQVTYRMVRLP
HVWAWAISWEAADAADVLVLLQQKFMRTGAPDELGYMMNLGFRDGQPVFMIQGMYCGSRADGMAAIDALLKFPTARLLVD
RSGSYPAMNRYLDDHPYDLPQGLTEGTCESKACGYLDRQLTKAQWQAVIDYFATSPNTYSMAYLEPYGGAIARYPVESSA
FIHRQVDADFVMDVFWTRPEDRATVQNWLAGFQALVRPLLTGKVYQNYPDGSLQNYVDAYWNQDVYARLQGVKRAYDPDN
FFHFAQSVKP

Sequences:

>Translated_490_residues
MAQRKSPARLAKDRRVAHLRGLAAANASAGTPWPWDALIALEDGLVGRAVLPDSPDYTQARQESNPAFQAYPLLIIYCEC
EDDVMSSLAFARTWKAWVAVRCGGHSTAGYSVNQMGVVIDLSDLGGVTIDPGAGRVHVLPGTDFDHFNGAMGATGWHVPT
GACGNVCVGGFVQGGGYGYTSRAYGIQSDLVESMRVALADGRIVTASATENAELYWAMRGGTGGNFGVLLQVTYRMVRLP
HVWAWAISWEAADAADVLVLLQQKFMRTGAPDELGYMMNLGFRDGQPVFMIQGMYCGSRADGMAAIDALLKFPTARLLVD
RSGSYPAMNRYLDDHPYDLPQGLTEGTCESKACGYLDRQLTKAQWQAVIDYFATSPNTYSMAYLEPYGGAIARYPVESSA
FIHRQVDADFVMDVFWTRPEDRATVQNWLAGFQALVRPLLTGKVYQNYPDGSLQNYVDAYWNQDVYARLQGVKRAYDPDN
FFHFAQSVKP
>Mature_489_residues
AQRKSPARLAKDRRVAHLRGLAAANASAGTPWPWDALIALEDGLVGRAVLPDSPDYTQARQESNPAFQAYPLLIIYCECE
DDVMSSLAFARTWKAWVAVRCGGHSTAGYSVNQMGVVIDLSDLGGVTIDPGAGRVHVLPGTDFDHFNGAMGATGWHVPTG
ACGNVCVGGFVQGGGYGYTSRAYGIQSDLVESMRVALADGRIVTASATENAELYWAMRGGTGGNFGVLLQVTYRMVRLPH
VWAWAISWEAADAADVLVLLQQKFMRTGAPDELGYMMNLGFRDGQPVFMIQGMYCGSRADGMAAIDALLKFPTARLLVDR
SGSYPAMNRYLDDHPYDLPQGLTEGTCESKACGYLDRQLTKAQWQAVIDYFATSPNTYSMAYLEPYGGAIARYPVESSAF
IHRQVDADFVMDVFWTRPEDRATVQNWLAGFQALVRPLLTGKVYQNYPDGSLQNYVDAYWNQDVYARLQGVKRAYDPDNF
FHFAQSVKP

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 53789; Mature: 53658

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRKSPARLAKDRRVAHLRGLAAANASAGTPWPWDALIALEDGLVGRAVLPDSPDYTQA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCHHHH
RQESNPAFQAYPLLIIYCECEDDVMSSLAFARTWKAWVAVRCGGHSTAGYSVNQMGVVID
HHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCEECCEEEEEE
LSDLGGVTIDPGAGRVHVLPGTDFDHFNGAMGATGWHVPTGACGNVCVGGFVQGGGYGYT
ECCCCCEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCCC
SRAYGIQSDLVESMRVALADGRIVTASATENAELYWAMRGGTGGNFGVLLQVTYRMVRLP
CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC
HVWAWAISWEAADAADVLVLLQQKFMRTGAPDELGYMMNLGFRDGQPVFMIQGMYCGSRA
CEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHCHHEECCCCCCCEEEEEEEEECCCCC
DGMAAIDALLKFPTARLLVDRSGSYPAMNRYLDDHPYDLPQGLTEGTCESKACGYLDRQL
CHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TKAQWQAVIDYFATSPNTYSMAYLEPYGGAIARYPVESSAFIHRQVDADFVMDVFWTRPE
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCEEEEECCHHHHHHHHCCCCC
DRATVQNWLAGFQALVRPLLTGKVYQNYPDGSLQNYVDAYWNQDVYARLQGVKRAYDPDN
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
FFHFAQSVKP
HHHHHHHCCC
>Mature Secondary Structure 
AQRKSPARLAKDRRVAHLRGLAAANASAGTPWPWDALIALEDGLVGRAVLPDSPDYTQA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCHHHH
RQESNPAFQAYPLLIIYCECEDDVMSSLAFARTWKAWVAVRCGGHSTAGYSVNQMGVVID
HHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCEECCEEEEEE
LSDLGGVTIDPGAGRVHVLPGTDFDHFNGAMGATGWHVPTGACGNVCVGGFVQGGGYGYT
ECCCCCEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCCC
SRAYGIQSDLVESMRVALADGRIVTASATENAELYWAMRGGTGGNFGVLLQVTYRMVRLP
CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC
HVWAWAISWEAADAADVLVLLQQKFMRTGAPDELGYMMNLGFRDGQPVFMIQGMYCGSRA
CEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHCHHEECCCCCCCEEEEEEEEECCCCC
DGMAAIDALLKFPTARLLVDRSGSYPAMNRYLDDHPYDLPQGLTEGTCESKACGYLDRQL
CHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TKAQWQAVIDYFATSPNTYSMAYLEPYGGAIARYPVESSAFIHRQVDADFVMDVFWTRPE
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCEEEEECCHHHHHHHHCCCCC
DRATVQNWLAGFQALVRPLLTGKVYQNYPDGSLQNYVDAYWNQDVYARLQGVKRAYDPDN
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
FFHFAQSVKP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]