| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610652
Identifier: 120610652
GI number: 120610652
Start: 2141769
End: 2142482
Strand: Direct
Name: 120610652
Synonym: Aave_1972
Alternate gene names: NA
Gene position: 2141769-2142482 (Clockwise)
Preceding gene: 120610651
Following gene: 120610653
Centisome position: 40.01
GC content: 67.79
Gene sequence:
>714_bases ATGACCCCCGACACTCCGGCCTCCCCAGATCGCCGCCCCCGGCTCGCGCTCTTCGACCTGGACCACACGCTTTTGCCGCT CGACTCCGACTACGAGTGGGGCGAGTTCACCATCCGCATCGGCTGGAACGACCGCACCGAATTCGGGCGCCGCAACAAGG AGTTCTACGACCACTACGTGGCCGGCACGCTGAATGTGCACGACTATGTGCGCTTCGCAGTGGATGCGGCGCGCCGGCAC GGGCCCGAGGCGGCCGCGGCGGCGCACGCGCAGTTCATGCGCGAGGTCATCGGCCCGGCCATCCTGCCGCAGGCGCTCGA CCTGCTGCGTACCCACCAGGGCGCAGGCGACGAGGTCGTCATCATCACGGCCACCAACGAGTTCGTCACCGCCCCGATCG CGCAGGCCCTGGGCGTGGAACAACTGCTGGCCGTGGAGCTCGAGCGCGACGGGAGCGGCTGGATCACCGGCGGCATCCGC GGTGTGCCCTCCATGCGCGAAGGCAAGGTGCAGCGCATGGAACAATGGCTGTCCGCCCGCGGCTGGACCTGGAGCGATGT GGAAAGCACTTTCTACAGCGATTCCATGAACGACGTGCCCCTGCTCGAAAAAGTCGACCATCCCGTCGCCACCAACCCCG ACCCCCGCCTGCGCGCACTGGCGCAGCAGCGCGGCTGGCGCATCCTGGACCTGTTTTCTACGCCAACACCATGA
Upstream 100 bases:
>100_bases GGCCATCACGATCCCCCTGCTCAAGACCATGCTGGAGTCCGAATAGCGGGCCGACGCCGCTGCCGACGACGCTTAGTTCC CCTTCGCACCGAATGCCCGC
Downstream 100 bases:
>100_bases TCAAGAAGTTCATCGACAAGCTGCTCGGCAAGGCCGCGCCGGGCACGGGCCGTGGGAAACACCGCTTCGGCAAGCGCGAG GACGTGCCCGCCTCCGTGCA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTPDTPASPDRRPRLALFDLDHTLLPLDSDYEWGEFTIRIGWNDRTEFGRRNKEFYDHYVAGTLNVHDYVRFAVDAARRH GPEAAAAAHAQFMREVIGPAILPQALDLLRTHQGAGDEVVIITATNEFVTAPIAQALGVEQLLAVELERDGSGWITGGIR GVPSMREGKVQRMEQWLSARGWTWSDVESTFYSDSMNDVPLLEKVDHPVATNPDPRLRALAQQRGWRILDLFSTPTP
Sequences:
>Translated_237_residues MTPDTPASPDRRPRLALFDLDHTLLPLDSDYEWGEFTIRIGWNDRTEFGRRNKEFYDHYVAGTLNVHDYVRFAVDAARRH GPEAAAAAHAQFMREVIGPAILPQALDLLRTHQGAGDEVVIITATNEFVTAPIAQALGVEQLLAVELERDGSGWITGGIR GVPSMREGKVQRMEQWLSARGWTWSDVESTFYSDSMNDVPLLEKVDHPVATNPDPRLRALAQQRGWRILDLFSTPTP >Mature_236_residues TPDTPASPDRRPRLALFDLDHTLLPLDSDYEWGEFTIRIGWNDRTEFGRRNKEFYDHYVAGTLNVHDYVRFAVDAARRHG PEAAAAAHAQFMREVIGPAILPQALDLLRTHQGAGDEVVIITATNEFVTAPIAQALGVEQLLAVELERDGSGWITGGIRG VPSMREGKVQRMEQWLSARGWTWSDVESTFYSDSMNDVPLLEKVDHPVATNPDPRLRALAQQRGWRILDLFSTPTP
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26629; Mature: 26498
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDTPASPDRRPRLALFDLDHTLLPLDSDYEWGEFTIRIGWNDRTEFGRRNKEFYDHYV CCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCEEEEEECCCCHHHHHHCCHHHHHHHH AGTLNVHDYVRFAVDAARRHGPEAAAAAHAQFMREVIGPAILPQALDLLRTHQGAGDEVV HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEE IITATNEFVTAPIAQALGVEQLLAVELERDGSGWITGGIRGVPSMREGKVQRMEQWLSAR EEEECCCHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHC GWTWSDVESTFYSDSMNDVPLLEKVDHPVATNPDPRLRALAQQRGWRILDLFSTPTP CCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure TPDTPASPDRRPRLALFDLDHTLLPLDSDYEWGEFTIRIGWNDRTEFGRRNKEFYDHYV CCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCEEEEEECCCCHHHHHHCCHHHHHHHH AGTLNVHDYVRFAVDAARRHGPEAAAAAHAQFMREVIGPAILPQALDLLRTHQGAGDEVV HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEE IITATNEFVTAPIAQALGVEQLLAVELERDGSGWITGGIRGVPSMREGKVQRMEQWLSAR EEEECCCHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHC GWTWSDVESTFYSDSMNDVPLLEKVDHPVATNPDPRLRALAQQRGWRILDLFSTPTP CCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]