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The map label for this gene is 120610647

Identifier: 120610647

GI number: 120610647

Start: 2137072

End: 2137752

Strand: Reverse

Name: 120610647

Synonym: Aave_1967

Alternate gene names: NA

Gene position: 2137752-2137072 (Counterclockwise)

Preceding gene: 120610648

Following gene: 120610646

Centisome position: 39.94

GC content: 73.57

Gene sequence:

>681_bases
ATGAGCGCCGTGGAGGCGATGGACGGGCAACCCCCGCCTGCCTCCATCCGGGTGGCGCTCCTGGCGTTCGACGACGTGGA
GGCGCTGGACCTGGCGGGCCCCTACGAGGTTTTCACCACCGCGGCCCGCCTGCATGCGCGCCATCAGCCCGGCACGCCGC
CGCTGTTCGACGTGCGCTGCGTGGCCCGTACGACCGCCGGCGGAGTCGTCGTGCGGGCGCGCGCAGGCCTGCGCATCGTG
CCGGACGGCGATTTCAGCGACGCCGTTCTGCCCGATGTGCTGATCGTGCCGGGCGGCGTGGTGGACGATGCCATGCGCTG
CCCCGATACCCTCGCCTGGATCGCGCGCGCCGCCGCCAGTGCCCGGGTGACGGCCTCGGTCTGCACGGGCGCCTTCCTGC
TCGCGGCCGCGGGTGTGGTGCGGGACGGCGCGGTCACCACGCACTGGGAGGATGTGGACGACCTGCGCAGGCAGTTCCCG
CGGCTCGACGTGCGCACGGGCGTGCGCTGGGTCCAGCACGGCGGTGCCGGCCGGCTGTTCACTTCGGCGGGCATCAGCGC
CGGCATCGACCTGTCGCTGCACCTGGTGGAACGCCTTGCCGGCCGCGCGCTCGCCGGACGCACGGCCCGCCAGATGGACA
CGCCCTGGCATCCCGATCCTCAAGGGGTATCGCACGCATGA

Upstream 100 bases:

>100_bases
AGACCGTGCTCGCAGGCCGCTTCGCCACCCTGTGCACGGTGGCCCAGGCGCTGTCCCGCGCGGGGGCAGGCACTGAAGCG
GCCCTTGCCGGAGAGGCGGC

Downstream 100 bases:

>100_bases
ACGGCGACCGGCCCGGCCCGATCCACGTCGTCTTCGCCTTGCTGCCCCACAGCCTGGTACTGGACTGGGCCGGCCCGGCG
GAAGCGCTGCGCATCGCCAA

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; ThiJ/PfpI Domain-Containing Protein; Transcriptional Regulator AraC Family; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; AraC Family Transcription Regulator; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; DJ-1/PfpI Family Protein; ThiJ/PfpI; Transcriptional Regulator DarR; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulatory Protein; Transcriptional Regulator Arac Family; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; ADPA-Family Transcriptional Regulator; Transcription Regulator; ADPA Family Transcriptional Regulator; AraC Family Regulatory Helix-Turn-Helix; Transcriptional Regulator AraC Type; AraC/XylS Family Transcriptional Regulator; AraC Family Transcription Regulator Protein; Regulatory Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSAVEAMDGQPPPASIRVALLAFDDVEALDLAGPYEVFTTAARLHARHQPGTPPLFDVRCVARTTAGGVVVRARAGLRIV
PDGDFSDAVLPDVLIVPGGVVDDAMRCPDTLAWIARAAASARVTASVCTGAFLLAAAGVVRDGAVTTHWEDVDDLRRQFP
RLDVRTGVRWVQHGGAGRLFTSAGISAGIDLSLHLVERLAGRALAGRTARQMDTPWHPDPQGVSHA

Sequences:

>Translated_226_residues
MSAVEAMDGQPPPASIRVALLAFDDVEALDLAGPYEVFTTAARLHARHQPGTPPLFDVRCVARTTAGGVVVRARAGLRIV
PDGDFSDAVLPDVLIVPGGVVDDAMRCPDTLAWIARAAASARVTASVCTGAFLLAAAGVVRDGAVTTHWEDVDDLRRQFP
RLDVRTGVRWVQHGGAGRLFTSAGISAGIDLSLHLVERLAGRALAGRTARQMDTPWHPDPQGVSHA
>Mature_225_residues
SAVEAMDGQPPPASIRVALLAFDDVEALDLAGPYEVFTTAARLHARHQPGTPPLFDVRCVARTTAGGVVVRARAGLRIVP
DGDFSDAVLPDVLIVPGGVVDDAMRCPDTLAWIARAAASARVTASVCTGAFLLAAAGVVRDGAVTTHWEDVDDLRRQFPR
LDVRTGVRWVQHGGAGRLFTSAGISAGIDLSLHLVERLAGRALAGRTARQMDTPWHPDPQGVSHA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23835; Mature: 23704

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVEAMDGQPPPASIRVALLAFDDVEALDLAGPYEVFTTAARLHARHQPGTPPLFDVRC
CCCCCCCCCCCCCHHEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
VARTTAGGVVVRARAGLRIVPDGDFSDAVLPDVLIVPGGVVDDAMRCPDTLAWIARAAAS
EEECCCCCEEEEECCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHH
ARVTASVCTGAFLLAAAGVVRDGAVTTHWEDVDDLRRQFPRLDVRTGVRWVQHGGAGRLF
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCEE
TSAGISAGIDLSLHLVERLAGRALAGRTARQMDTPWHPDPQGVSHA
ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVEAMDGQPPPASIRVALLAFDDVEALDLAGPYEVFTTAARLHARHQPGTPPLFDVRC
CCCCCCCCCCCCHHEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
VARTTAGGVVVRARAGLRIVPDGDFSDAVLPDVLIVPGGVVDDAMRCPDTLAWIARAAAS
EEECCCCCEEEEECCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHH
ARVTASVCTGAFLLAAAGVVRDGAVTTHWEDVDDLRRQFPRLDVRTGVRWVQHGGAGRLF
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCEE
TSAGISAGIDLSLHLVERLAGRALAGRTARQMDTPWHPDPQGVSHA
ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA