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The map label for this gene is tse [H]

Identifier: 120610636

GI number: 120610636

Start: 2123243

End: 2125039

Strand: Direct

Name: tse [H]

Synonym: Aave_1956

Alternate gene names: 120610636

Gene position: 2123243-2125039 (Clockwise)

Preceding gene: 120610635

Following gene: 120610637

Centisome position: 39.67

GC content: 70.23

Gene sequence:

>1797_bases
ATGAACATTTCCCATTGGCCCCTGGGCCGACGGCTCGCCCTGGCATTCGGCGGCGTCATCGCGATCTTCCTGGTGGTGAT
CGGCGTGGCCATACAGAGCCAGAACCACATCAAGGCGGCCTCCGGCATGAATATCCACACCTACAGGGTGCTGGAAGAGG
CCCGGCGGATGCTGCTGGGCGTGGTCAACATGGAAACCGGCGCCCGCGGCTACCTGCTGTCCGGCGATGCGGCCTTTCTC
GATCCCTGGAACCAGGGGCGCGAAGCTTTCGAGTCCGCCTGGCAATCGCTGCGCTCCCTGACCGCGGACAACCCGGAGCA
GCAAAAGCGGCTCGACGTGCTGCGCGCCCGCCAGGCGGACTTCGCCGCGGTGATGCAGTCGCTGCAGGACATGCGCCGCG
ACGTGGACGCCGGCAAGGTCACGATGGAGGCCTTCGTCAGCGAGTTCGGCAAGGCACGCGACAAGGCCGCGATGGATGAC
TTCCGGACCATGCAGACCGAGTTCTCCAAGGCCGAACGCGACCTGCTCGACGTGCGTCTGGCCGATGCGGAAGACGCCCG
TGCCACGGCCCTGGCGGCGGAGGTCGGCGGGACCGCGCTGGCCGTGGTGGTGGCCCTGCTGCTCAGCCTGTGGGTGACCC
GTTCCATCACCCGTCCCATCGCCCGGGCGGTGGAGGTGGCCCGGGCCGTCGCTGCGGGAGACCTGACCCAGCGCATCGAG
GTCCATGCGCGGGACGAAGTGGGCCTGCTGCTGGAGAGCCTGCGCGACATGAATACGGCGCTCGCCACCGTCGTGTCCCG
GGTGCGCCAGGGCAGCGAATCGGTCGCCTCGGCCAGCATGCAGATCGCGCAGGGCAATTCCGACCTGTCGTCCCGCACGG
AAAGCCAGGCCAGCGCGCTGGAGGAAACCGCCGCCTCCATGGAGGAACTGGGGTCCACGGTGGCGCAGAACGCGGACAAC
GCGCGCCAGGCCAACCAGCTGGCCCAGGCCGCGAGCGGCGTGGCGGAGCAGGGCGGGGCGGTGGTGTCGCAGGTGGTGGA
CACCATGAAGGGCATTTCGGAGAGCTCGCGGCGCATCTCCGACATCATCAATGTCATCGACGGCATCGCCTTCCAGACCA
ACATCCTGGCCCTGAATGCCGCCGTGGAGGCCGCGCGTGCCGGCGAGCAGGGCCGGGGCTTCGCCGTGGTGGCCGGCGAG
GTGCGCAGCCTCGCGCAGCGCAGCGCCGGCGCGGCGAAGGAAATCAAGGAACTCATCACGGCCAGCGTCGAGCGGGTGGA
AGACGGCGCGCAACTGGCCGACCGGGCCGGCAGCACCATGACGGAGGTGGTGGGCAGCATCCGCCGCGTGACCGACATCA
TGGGCGAGATCAGCGCGGCGAGCAGCGAGCAGAGCGCCGGGGTGGCGCAGGTCGGCGAAGCCGTCACCCAGATGGACCAG
ACCACGCAGCAGAACGCCGCCCTGGTGGAGGAGATGGCGGCGGCGGCCTCCAGCCTTCGTTCCCAGGCGCAGGACCTGGT
GCAGGCCGTCAGCGTGTTCCGGCTGGCGTCGGACACCCCGCGGGCCGAGCCCGTCGAGGTGACGGCTCCTACCGCGGTGA
CGGTTGCGCCTGCTCCATCGCCGGCTCCCGCGGTGGCGGCGCCGCGGCCATCCATGCCTGCCCGCAGGAAGTCTCCGGCG
AAGATGCCGTCTCCTGCACGCACCCCGTCCCTGCGGCCTGCTGCCGCGGGCGCCGGCTTCATGGCGGTTCCCGCCATGGC
GGCACAGGGCGGGCAGGGCGACTGGGAGTCTTTCTGA

Upstream 100 bases:

>100_bases
CGTGCTCCCATGACGGAGCAGTCGCCGCGGATGTCGCGCGGCGGGGCCGGGGTCGGCCCCTTCCCCATGGTGTGGCGTTC
CTGCATGAAAGCGGTACTCC

Downstream 100 bases:

>100_bases
GCGCACCCCAGCGGCGGCTGGCCGCCGCTGCGCCAGAATCGGGGCCTTCCAGCCCTTTTCGCGCCGCCGTCGTGCTTCCC
CCGGCGGCTTTCCCATGCCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MNISHWPLGRRLALAFGGVIAIFLVVIGVAIQSQNHIKAASGMNIHTYRVLEEARRMLLGVVNMETGARGYLLSGDAAFL
DPWNQGREAFESAWQSLRSLTADNPEQQKRLDVLRARQADFAAVMQSLQDMRRDVDAGKVTMEAFVSEFGKARDKAAMDD
FRTMQTEFSKAERDLLDVRLADAEDARATALAAEVGGTALAVVVALLLSLWVTRSITRPIARAVEVARAVAAGDLTQRIE
VHARDEVGLLLESLRDMNTALATVVSRVRQGSESVASASMQIAQGNSDLSSRTESQASALEETAASMEELGSTVAQNADN
ARQANQLAQAASGVAEQGGAVVSQVVDTMKGISESSRRISDIINVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSAGAAKEIKELITASVERVEDGAQLADRAGSTMTEVVGSIRRVTDIMGEISAASSEQSAGVAQVGEAVTQMDQ
TTQQNAALVEEMAAAASSLRSQAQDLVQAVSVFRLASDTPRAEPVEVTAPTAVTVAPAPSPAPAVAAPRPSMPARRKSPA
KMPSPARTPSLRPAAAGAGFMAVPAMAAQGGQGDWESF

Sequences:

>Translated_598_residues
MNISHWPLGRRLALAFGGVIAIFLVVIGVAIQSQNHIKAASGMNIHTYRVLEEARRMLLGVVNMETGARGYLLSGDAAFL
DPWNQGREAFESAWQSLRSLTADNPEQQKRLDVLRARQADFAAVMQSLQDMRRDVDAGKVTMEAFVSEFGKARDKAAMDD
FRTMQTEFSKAERDLLDVRLADAEDARATALAAEVGGTALAVVVALLLSLWVTRSITRPIARAVEVARAVAAGDLTQRIE
VHARDEVGLLLESLRDMNTALATVVSRVRQGSESVASASMQIAQGNSDLSSRTESQASALEETAASMEELGSTVAQNADN
ARQANQLAQAASGVAEQGGAVVSQVVDTMKGISESSRRISDIINVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSAGAAKEIKELITASVERVEDGAQLADRAGSTMTEVVGSIRRVTDIMGEISAASSEQSAGVAQVGEAVTQMDQ
TTQQNAALVEEMAAAASSLRSQAQDLVQAVSVFRLASDTPRAEPVEVTAPTAVTVAPAPSPAPAVAAPRPSMPARRKSPA
KMPSPARTPSLRPAAAGAGFMAVPAMAAQGGQGDWESF
>Mature_598_residues
MNISHWPLGRRLALAFGGVIAIFLVVIGVAIQSQNHIKAASGMNIHTYRVLEEARRMLLGVVNMETGARGYLLSGDAAFL
DPWNQGREAFESAWQSLRSLTADNPEQQKRLDVLRARQADFAAVMQSLQDMRRDVDAGKVTMEAFVSEFGKARDKAAMDD
FRTMQTEFSKAERDLLDVRLADAEDARATALAAEVGGTALAVVVALLLSLWVTRSITRPIARAVEVARAVAAGDLTQRIE
VHARDEVGLLLESLRDMNTALATVVSRVRQGSESVASASMQIAQGNSDLSSRTESQASALEETAASMEELGSTVAQNADN
ARQANQLAQAASGVAEQGGAVVSQVVDTMKGISESSRRISDIINVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSAGAAKEIKELITASVERVEDGAQLADRAGSTMTEVVGSIRRVTDIMGEISAASSEQSAGVAQVGEAVTQMDQ
TTQQNAALVEEMAAAASSLRSQAQDLVQAVSVFRLASDTPRAEPVEVTAPTAVTVAPAPSPAPAVAAPRPSMPARRKSPA
KMPSPARTPSLRPAAAGAGFMAVPAMAAQGGQGDWESF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=403, Percent_Identity=51.6129032258064, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI1788195, Length=340, Percent_Identity=55.8823529411765, Blast_Score=327, Evalue=1e-90,
Organism=Escherichia coli, GI1788194, Length=333, Percent_Identity=54.6546546546547, Blast_Score=318, Evalue=7e-88,
Organism=Escherichia coli, GI1787690, Length=330, Percent_Identity=53.9393939393939, Blast_Score=315, Evalue=5e-87,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=39.8148148148148, Blast_Score=218, Evalue=9e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62912; Mature: 62912

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISHWPLGRRLALAFGGVIAIFLVVIGVAIQSQNHIKAASGMNIHTYRVLEEARRMLLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHH
VVNMETGARGYLLSGDAAFLDPWNQGREAFESAWQSLRSLTADNPEQQKRLDVLRARQAD
HHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FAAVMQSLQDMRRDVDAGKVTMEAFVSEFGKARDKAAMDDFRTMQTEFSKAERDLLDVRL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADAEDARATALAAEVGGTALAVVVALLLSLWVTRSITRPIARAVEVARAVAAGDLTQRIE
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHARDEVGLLLESLRDMNTALATVVSRVRQGSESVASASMQIAQGNSDLSSRTESQASAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EETAASMEELGSTVAQNADNARQANQLAQAASGVAEQGGAVVSQVVDTMKGISESSRRIS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DIINVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKELIT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHH
ASVERVEDGAQLADRAGSTMTEVVGSIRRVTDIMGEISAASSEQSAGVAQVGEAVTQMDQ
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
TTQQNAALVEEMAAAASSLRSQAQDLVQAVSVFRLASDTPRAEPVEVTAPTAVTVAPAPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCC
PAPAVAAPRPSMPARRKSPAKMPSPARTPSLRPAAAGAGFMAVPAMAAQGGQGDWESF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNISHWPLGRRLALAFGGVIAIFLVVIGVAIQSQNHIKAASGMNIHTYRVLEEARRMLLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHH
VVNMETGARGYLLSGDAAFLDPWNQGREAFESAWQSLRSLTADNPEQQKRLDVLRARQAD
HHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FAAVMQSLQDMRRDVDAGKVTMEAFVSEFGKARDKAAMDDFRTMQTEFSKAERDLLDVRL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADAEDARATALAAEVGGTALAVVVALLLSLWVTRSITRPIARAVEVARAVAAGDLTQRIE
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHARDEVGLLLESLRDMNTALATVVSRVRQGSESVASASMQIAQGNSDLSSRTESQASAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EETAASMEELGSTVAQNADNARQANQLAQAASGVAEQGGAVVSQVVDTMKGISESSRRIS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DIINVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKELIT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHH
ASVERVEDGAQLADRAGSTMTEVVGSIRRVTDIMGEISAASSEQSAGVAQVGEAVTQMDQ
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
TTQQNAALVEEMAAAASSLRSQAQDLVQAVSVFRLASDTPRAEPVEVTAPTAVTVAPAPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCC
PAPAVAAPRPSMPARRKSPAKMPSPARTPSLRPAAAGAGFMAVPAMAAQGGQGDWESF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]