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The map label for this gene is 120610618

Identifier: 120610618

GI number: 120610618

Start: 2101349

End: 2101825

Strand: Reverse

Name: 120610618

Synonym: Aave_1938

Alternate gene names: NA

Gene position: 2101825-2101349 (Counterclockwise)

Preceding gene: 120610619

Following gene: 120610616

Centisome position: 39.27

GC content: 70.86

Gene sequence:

>477_bases
ATGAACTCGTACCTGGTCCTCAAGTGGGTGCACATCCTCTCCAGCGTGCTGCTGGTGGGCACGGGATTCGGCTCGGCCTT
CTACCTGTTCTTCGCCAACCGCAGCGGCAGCGTGCAGGCCCAGGCCGTGGTGGCGCGCCTCGTGGTGCGCGCGGACACCT
GGTTCACCACGCCCGCCGGCATCGTGCAGCCGGTCAGCGGCGTGGCGCTGGCCCACATGGCCGGCTGGCCGCTCGCCACG
CCCTGGATCTCTGCCTCGCTGGGGCTGTACGTGGTCGCCGGCCTGTGCTGGCTGCCCGTGCTGTGGCTGCAGTGGCGCAT
GGCCGCCATGGCGCGCGACGCGGCGGACCGCGGCACCGCGCTGCCGGAAGACTACCGCCGCCATGCGCGCTGGTGGGAAG
CGCTCGGCTACCCGGCCTTCATCGCCATGCTCGCGATCTACTACATGATGGTGGCCAAGCCGGCGCTCTGGGGCTGA

Upstream 100 bases:

>100_bases
TGCTGCCCGGGCTGTGGCTCGACCCGCTGGGCCGGCTGCTCAAGAACATTCCCATCGCGGCCATCCTGCTCGTGCTCTGG
CACACGGAAGAATGGCGTCC

Downstream 100 bases:

>100_bases
AGGTGGCGCGCCCCCGGGCGTCCGGCCGGCGCCGTCAGACCGCGGGCTTGTCGCTCTGCGCCGTGAGGTTGTCGCGCAGT
TCCTTCGACATCGGCAGGCC

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Integral Membrane Protein-Like; Transmembrane Protein; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNSYLVLKWVHILSSVLLVGTGFGSAFYLFFANRSGSVQAQAVVARLVVRADTWFTTPAGIVQPVSGVALAHMAGWPLAT
PWISASLGLYVVAGLCWLPVLWLQWRMAAMARDAADRGTALPEDYRRHARWWEALGYPAFIAMLAIYYMMVAKPALWG

Sequences:

>Translated_158_residues
MNSYLVLKWVHILSSVLLVGTGFGSAFYLFFANRSGSVQAQAVVARLVVRADTWFTTPAGIVQPVSGVALAHMAGWPLAT
PWISASLGLYVVAGLCWLPVLWLQWRMAAMARDAADRGTALPEDYRRHARWWEALGYPAFIAMLAIYYMMVAKPALWG
>Mature_158_residues
MNSYLVLKWVHILSSVLLVGTGFGSAFYLFFANRSGSVQAQAVVARLVVRADTWFTTPAGIVQPVSGVALAHMAGWPLAT
PWISASLGLYVVAGLCWLPVLWLQWRMAAMARDAADRGTALPEDYRRHARWWEALGYPAFIAMLAIYYMMVAKPALWG

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17462; Mature: 17462

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYLVLKWVHILSSVLLVGTGFGSAFYLFFANRSGSVQAQAVVARLVVRADTWFTTPAG
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHH
IVQPVSGVALAHMAGWPLATPWISASLGLYVVAGLCWLPVLWLQWRMAAMARDAADRGTA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPEDYRRHARWWEALGYPAFIAMLAIYYMMVAKPALWG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNSYLVLKWVHILSSVLLVGTGFGSAFYLFFANRSGSVQAQAVVARLVVRADTWFTTPAG
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHH
IVQPVSGVALAHMAGWPLATPWISASLGLYVVAGLCWLPVLWLQWRMAAMARDAADRGTA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPEDYRRHARWWEALGYPAFIAMLAIYYMMVAKPALWG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA