| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610602
Identifier: 120610602
GI number: 120610602
Start: 2081307
End: 2082479
Strand: Reverse
Name: 120610602
Synonym: Aave_1922
Alternate gene names: NA
Gene position: 2082479-2081307 (Counterclockwise)
Preceding gene: 120610603
Following gene: 120610601
Centisome position: 38.9
GC content: 74.77
Gene sequence:
>1173_bases ATGGGCACGCCGCGCAGGAAAGGGGGCGCAGGCCAGGGCGAGCCTTCGCGGCGTTCGGCGCTGCGCACGCTGGCCGGTAT CGGCCTCGCCGTGCCGTTGTCCGGCGCCTGGAGCGGCGCGGGCGCATCGGGCATGCCCCTGCGTCTCGCGGCCGCCTGGC AGCAGGGGGATGGCGGCTACCGCATCGGCCTGCTGGAGGCGCAGCCCGGGTCCGGCACCGCACTGCGCGCGCTGCACGCG CTGGAGATCCCCACGCGCGCGCACGGCCTGTGCCCGCTGCCCGACGGCAGCATCGTGGCAGCATCGCGCCGCCCGGGCGA CTGGCTGCTGCGCTGGTGGCCGGGCACGGCGCGCGAACCCGTCTGGCAGTGGTCCGACGGCCAGCGCTCGTTCAACGGCC ACGTGATCGCGTCACCGGACGCGCGCCTGCTGCTCTCCACCGAAACCGAGGCGGAGACGGGGCGCAGCCTCGTCGTGCTG CGCGACGCCGCCAGCCTGGAAATGCGCGCGGAGTGGTCCACCCAGGGCATCGATGCGCATGAACTGATCTGGGACCGGCG CGCACCGGTGGACGGCACGCCGACCCTGATCGTGGCCAATGGCGGCGTGCCGACGGCCCCCGAGACCGGTCGCGTGAAGC GGGCGCTGGACACCATGGATTCGTCCATCGTGCGCCTGCACGGAGGCACGGGCGAAACCCTGGGGCAATGGCGCCTGCAG GACCGCCGCCTGAGCCTGCGCCACCTCGCCTGGAACCCCGGCGCGGACGTGCTCGGCATCGCGCTGCAGGCCGAACACGA CGGGATGGACGCGCGCGCCGCCGCACCCGTGCTTGCGCTCTTCGACGGCAAGGTGCTGCGGACCGCCGACCCGGCGCCGC AGGTGCTGCCCGGTGGCCTGCGGGGGTACGGAGGCAGCATCGCCGGATGGGCGGAAGGCTGGACCGTGAGCTGCCCCCGC GCGCAGGGCATCGCCGCCTTCGACGCCCGCGGTGGATGGCGACGACTCATCCCGCTGCCCGAGGCCTGCGCGCTGGCGGT GCGGGGTTCCGGTCTGTGGGCTGCCGGGGTGGAACATACGCTGGAGAACGCCCAGGGCACGGCGCCGCTCCACCACCCCC ACGGCCCCTCGCTCGCGGATGCGCGGGTGGACAACCACTGGTACCCCGCGTGA
Upstream 100 bases:
>100_bases GCGAAAGAGCTCAGCGCGCTCAAGCGGCTCGCCGAAGCCGAGGTGGCGCCGGCCCTGCAGGTCAGCATCGGTTTCTCGGA TGCGGACGGGGACTGACGCG
Downstream 100 bases:
>100_bases TCCATAAATTACGGTAGAGCTACATCCGGAGACAATCACACGGAAAGTTATACAAGGCATTACAACGACACGCTTTTCGT AAGGTTTTACTTACACTCCG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: Secreted Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MGTPRRKGGAGQGEPSRRSALRTLAGIGLAVPLSGAWSGAGASGMPLRLAAAWQQGDGGYRIGLLEAQPGSGTALRALHA LEIPTRAHGLCPLPDGSIVAASRRPGDWLLRWWPGTAREPVWQWSDGQRSFNGHVIASPDARLLLSTETEAETGRSLVVL RDAASLEMRAEWSTQGIDAHELIWDRRAPVDGTPTLIVANGGVPTAPETGRVKRALDTMDSSIVRLHGGTGETLGQWRLQ DRRLSLRHLAWNPGADVLGIALQAEHDGMDARAAAPVLALFDGKVLRTADPAPQVLPGGLRGYGGSIAGWAEGWTVSCPR AQGIAAFDARGGWRRLIPLPEACALAVRGSGLWAAGVEHTLENAQGTAPLHHPHGPSLADARVDNHWYPA
Sequences:
>Translated_390_residues MGTPRRKGGAGQGEPSRRSALRTLAGIGLAVPLSGAWSGAGASGMPLRLAAAWQQGDGGYRIGLLEAQPGSGTALRALHA LEIPTRAHGLCPLPDGSIVAASRRPGDWLLRWWPGTAREPVWQWSDGQRSFNGHVIASPDARLLLSTETEAETGRSLVVL RDAASLEMRAEWSTQGIDAHELIWDRRAPVDGTPTLIVANGGVPTAPETGRVKRALDTMDSSIVRLHGGTGETLGQWRLQ DRRLSLRHLAWNPGADVLGIALQAEHDGMDARAAAPVLALFDGKVLRTADPAPQVLPGGLRGYGGSIAGWAEGWTVSCPR AQGIAAFDARGGWRRLIPLPEACALAVRGSGLWAAGVEHTLENAQGTAPLHHPHGPSLADARVDNHWYPA >Mature_389_residues GTPRRKGGAGQGEPSRRSALRTLAGIGLAVPLSGAWSGAGASGMPLRLAAAWQQGDGGYRIGLLEAQPGSGTALRALHAL EIPTRAHGLCPLPDGSIVAASRRPGDWLLRWWPGTAREPVWQWSDGQRSFNGHVIASPDARLLLSTETEAETGRSLVVLR DAASLEMRAEWSTQGIDAHELIWDRRAPVDGTPTLIVANGGVPTAPETGRVKRALDTMDSSIVRLHGGTGETLGQWRLQD RRLSLRHLAWNPGADVLGIALQAEHDGMDARAAAPVLALFDGKVLRTADPAPQVLPGGLRGYGGSIAGWAEGWTVSCPRA QGIAAFDARGGWRRLIPLPEACALAVRGSGLWAAGVEHTLENAQGTAPLHHPHGPSLADARVDNHWYPA
Specific function: Unknown
COG id: COG3490
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41218; Mature: 41087
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPRRKGGAGQGEPSRRSALRTLAGIGLAVPLSGAWSGAGASGMPLRLAAAWQQGDGGY CCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCE RIGLLEAQPGSGTALRALHALEIPTRAHGLCPLPDGSIVAASRRPGDWLLRWWPGTAREP EEEEEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCC VWQWSDGQRSFNGHVIASPDARLLLSTETEAETGRSLVVLRDAASLEMRAEWSTQGIDAH CEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCHH ELIWDRRAPVDGTPTLIVANGGVPTAPETGRVKRALDTMDSSIVRLHGGTGETLGQWRLQ HHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHEEEC DRRLSLRHLAWNPGADVLGIALQAEHDGMDARAAAPVLALFDGKVLRTADPAPQVLPGGL CCCEEEEEEECCCCCCEEEEEEEECCCCCCCHHHCCEEEEECCEEEECCCCCCCCCCCCC RGYGGSIAGWAEGWTVSCPRAQGIAAFDARGGWRRLIPLPEACALAVRGSGLWAAGVEHT CCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCEECCCCCCHHEEEEECCCEEEHHHHHH LENAQGTAPLHHPHGPSLADARVDNHWYPA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTPRRKGGAGQGEPSRRSALRTLAGIGLAVPLSGAWSGAGASGMPLRLAAAWQQGDGGY CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCE RIGLLEAQPGSGTALRALHALEIPTRAHGLCPLPDGSIVAASRRPGDWLLRWWPGTAREP EEEEEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCC VWQWSDGQRSFNGHVIASPDARLLLSTETEAETGRSLVVLRDAASLEMRAEWSTQGIDAH CEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCHH ELIWDRRAPVDGTPTLIVANGGVPTAPETGRVKRALDTMDSSIVRLHGGTGETLGQWRLQ HHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHEEEC DRRLSLRHLAWNPGADVLGIALQAEHDGMDARAAAPVLALFDGKVLRTADPAPQVLPGGL CCCEEEEEEECCCCCCEEEEEEEECCCCCCCHHHCCEEEEECCEEEECCCCCCCCCCCCC RGYGGSIAGWAEGWTVSCPRAQGIAAFDARGGWRRLIPLPEACALAVRGSGLWAAGVEHT CCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCEECCCCCCHHEEEEECCCEEEHHHHHH LENAQGTAPLHHPHGPSLADARVDNHWYPA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA