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The map label for this gene is 120610601

Identifier: 120610601

GI number: 120610601

Start: 2080368

End: 2081186

Strand: Reverse

Name: 120610601

Synonym: Aave_1921

Alternate gene names: NA

Gene position: 2081186-2080368 (Counterclockwise)

Preceding gene: 120610602

Following gene: 120610600

Centisome position: 38.88

GC content: 73.26

Gene sequence:

>819_bases
ATGCCTTTCTTTCCACCCCACCGCATCCGTTTCGCCGCGCTCTGCTGGGCGGGCGCATTGCATTGCCATGCCGTGCTGGC
CGCGGACATCCTGCTGGCGCCTCCGCCGAACGGCGGCTTCTCGGTGACCAGCAGCGACAAGACGCAGATCCGGCTGCGCG
TGGACGAGGCCTCGGGCACCGTCACGCTGCCCGGGCTGGCCTCGGTGCCACAGCAGGGCACGCCCGTCTGCCATGGTCCG
GGCGGGGTGCTCGGCGATTGCAGCGCAGGAGTGGTCGGGGCCACCGGGGCGACCGGTGCCACGGGCGCGGCCGGCCCGGC
AGGAGCGACCGGTCCGACGGGCAGCGCGGGCCCCACGGGGGCGACAGGTGCTCCGGGCCCCACGGGCGCATCCGGGGCCA
CCGGAGCCGTCGGCCCTGCCGGGGCGACCGGACCTGCCGGCCCCGCAGGCCCGGCCGGGCCCACCGGTGCGACGGGAGCG
ACAGGCGCCCAGGGCAGCGTCGGTCCTGCCGGCCCCACGGGCGCGACCGGCTCCGTGAGCACGGCCGTCGCGATCCGGGC
ATTCACGCTGCCCAACGTGGGCAGCGACATCTGCGCAGTCGTGTCCTGCTGCAATCCCGGCGAGAAAGTTCTGGGCGGCG
GGCACGCCGCGAACACCGGCAGGGACTCGCCCGAAGATGCGGCGGTCTATGTCGGCGAAAGCCGCCCGGTCGATAACTGC
GGAGGCACCGCAGGTACTCTCGGCTGGTCGGTGAAGATACTCAACTCGTACCGCGCCAACCTGCAGAGCTGCTCCGCCTA
CGCCATTTGCTCGCAGTAG

Upstream 100 bases:

>100_bases
TACATCCGGAGACAATCACACGGAAAGTTATACAAGGCATTACAACGACACGCTTTTCGTAAGGTTTTACTTACACTCCG
GCAATTCTGCGAGGTCGCCG

Downstream 100 bases:

>100_bases
CGCCAAGCCCTCCGGTTGCCGCGATGACCGAGACCACGCACACCTCCCGGGCCCGGCACGGCGGTGCCACGGCGGAGTTT
CCGCATGCACGGCGCGTTGC

Product: triple helix repeat-containing collagen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPFFPPHRIRFAALCWAGALHCHAVLAADILLAPPPNGGFSVTSSDKTQIRLRVDEASGTVTLPGLASVPQQGTPVCHGP
GGVLGDCSAGVVGATGATGATGAAGPAGATGPTGSAGPTGATGAPGPTGASGATGAVGPAGATGPAGPAGPAGPTGATGA
TGAQGSVGPAGPTGATGSVSTAVAIRAFTLPNVGSDICAVVSCCNPGEKVLGGGHAANTGRDSPEDAAVYVGESRPVDNC
GGTAGTLGWSVKILNSYRANLQSCSAYAICSQ

Sequences:

>Translated_272_residues
MPFFPPHRIRFAALCWAGALHCHAVLAADILLAPPPNGGFSVTSSDKTQIRLRVDEASGTVTLPGLASVPQQGTPVCHGP
GGVLGDCSAGVVGATGATGATGAAGPAGATGPTGSAGPTGATGAPGPTGASGATGAVGPAGATGPAGPAGPAGPTGATGA
TGAQGSVGPAGPTGATGSVSTAVAIRAFTLPNVGSDICAVVSCCNPGEKVLGGGHAANTGRDSPEDAAVYVGESRPVDNC
GGTAGTLGWSVKILNSYRANLQSCSAYAICSQ
>Mature_271_residues
PFFPPHRIRFAALCWAGALHCHAVLAADILLAPPPNGGFSVTSSDKTQIRLRVDEASGTVTLPGLASVPQQGTPVCHGPG
GVLGDCSAGVVGATGATGATGAAGPAGATGPTGSAGPTGATGAPGPTGASGATGAVGPAGATGPAGPAGPAGPTGATGAT
GAQGSVGPAGPTGATGSVSTAVAIRAFTLPNVGSDICAVVSCCNPGEKVLGGGHAANTGRDSPEDAAVYVGESRPVDNCG
GTAGTLGWSVKILNSYRANLQSCSAYAICSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI183583553, Length=106, Percent_Identity=38.6792452830189, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI56847616, Length=105, Percent_Identity=43.8095238095238, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25535; Mature: 25403

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFPPHRIRFAALCWAGALHCHAVLAADILLAPPPNGGFSVTSSDKTQIRLRVDEASGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCEEEEEEEECCCCE
VTLPGLASVPQQGTPVCHGPGGVLGDCSAGVVGATGATGATGAAGPAGATGPTGSAGPTG
EECCCHHCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ATGAPGPTGASGATGAVGPAGATGPAGPAGPAGPTGATGATGAQGSVGPAGPTGATGSVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
TAVAIRAFTLPNVGSDICAVVSCCNPGEKVLGGGHAANTGRDSPEDAAVYVGESRPVDNC
HEEEEEEEECCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCC
GGTAGTLGWSVKILNSYRANLQSCSAYAICSQ
CCCCCCCCEEEEEHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure 
PFFPPHRIRFAALCWAGALHCHAVLAADILLAPPPNGGFSVTSSDKTQIRLRVDEASGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCEEEEEEEECCCCE
VTLPGLASVPQQGTPVCHGPGGVLGDCSAGVVGATGATGATGAAGPAGATGPTGSAGPTG
EECCCHHCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ATGAPGPTGASGATGAVGPAGATGPAGPAGPAGPTGATGATGAQGSVGPAGPTGATGSVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
TAVAIRAFTLPNVGSDICAVVSCCNPGEKVLGGGHAANTGRDSPEDAAVYVGESRPVDNC
HEEEEEEEECCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCC
GGTAGTLGWSVKILNSYRANLQSCSAYAICSQ
CCCCCCCCEEEEEHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA