| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610599
Identifier: 120610599
GI number: 120610599
Start: 2078453
End: 2079502
Strand: Reverse
Name: 120610599
Synonym: Aave_1919
Alternate gene names: NA
Gene position: 2079502-2078453 (Counterclockwise)
Preceding gene: 120610600
Following gene: 120610598
Centisome position: 38.85
GC content: 71.24
Gene sequence:
>1050_bases ATGGATCGTCTGAATTTCGAGGGCTGGTCGCCCATCCGCATCTACCGGGAACCGGGCGGCGCAGTGCTCGTCGATTGGAT GCGCGCGTCGCCCGAAGTCACGCGCAGGCCTTTCTTCGCCGATGGCGTGCAGAGCGCGATGCAGTGGCCGTTCCACCAGG CATTCCGCCGGCAGACGCCCCTGGCCGACCTGATCGGCTGGGCGCAGGCGTCGCCGGGGCTGCAGCCGTCGGGCATCGTC TTCCACGTCTCGCGCTGCGGCTCCACCCTCGTCACCCAGGCCTTCGCAGCGCTCGATGACCACGTGGCCCTGTCGGAGCC GCCGCCGCTGGACGATCTGCTGCGCGCGGAACACCGGCTGCCGGGCCTGGACCCGGCCCAGGCACTCCGGGCCGCCCGGG CCTTCGCGAGCGCGTGGGCCCGGCCATCGCCACCCGGCCGGCGCGGCCACCTCGTCATCAAGTACGACTGCTGGGCCACG GCCCTCGCCGGCCGCATCGCCGAGGCATGGCCCGATACGCCCTGGCTCTTCCTGTACCGCGATCCGCTGGAGGTGCTGGT GTCGCAGATGCAGCAGCGTGCGGCCTACCTGATCCCCGGTGGACCGCTCGGCGTCAACCCCGCGGCCATCCCCTTCGATG AAGCGCTGCGCATCGGCCCCGAGGCGTATTGTGCACGCAGCCTGGGCAGCATCTATGCCGCGCTGGTCCGGGAATTCCGG CCGGAACGCACCCTGCTGCTCGACTACCGGCAGCTGCCCGCGGCGATCCCCGAAACCATCGCGCCGCATTTCGGCATGCA GCCCGGCGCGCAGGCCATCGAACGCATGCAGGCCACCTTCGGCGTGCATGCGAAGAATCCCTCACATCCCTTCACGCCCG ACGCCAGGCGCAAACACCGCGAAGCACCGCAGCGGCTGCGCGAGCTGGCCCAGGAATGGATCGCCCCGCACCACGATGCC CTGGAACGGCTGCGTGCCCGGCAGGACCGCGGCGCCGCGGCGAACAGCGTCGAGGCCGGCGCGCGTGCCGAAGGAGCGAC ACTCCCATGA
Upstream 100 bases:
>100_bases CGCAGGCCTGCGTGCGACAGGGCCGGGCCCTGGGCCGGGACTTCACCGAGGCGGAAGTGCTGTCCGCCATGGCCTGCGGA CGCGATGCATGGATGCGGCA
Downstream 100 bases:
>100_bases CCCTTGCGACCCCCACCCTCGCGCGGCTCGGCCGCCGCGGCTTCCTCGGGGCCTCGGCCTCCACGGCCGCAGCCGCCGCC ACGGCAAGCGCACCGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MDRLNFEGWSPIRIYREPGGAVLVDWMRASPEVTRRPFFADGVQSAMQWPFHQAFRRQTPLADLIGWAQASPGLQPSGIV FHVSRCGSTLVTQAFAALDDHVALSEPPPLDDLLRAEHRLPGLDPAQALRAARAFASAWARPSPPGRRGHLVIKYDCWAT ALAGRIAEAWPDTPWLFLYRDPLEVLVSQMQQRAAYLIPGGPLGVNPAAIPFDEALRIGPEAYCARSLGSIYAALVREFR PERTLLLDYRQLPAAIPETIAPHFGMQPGAQAIERMQATFGVHAKNPSHPFTPDARRKHREAPQRLRELAQEWIAPHHDA LERLRARQDRGAAANSVEAGARAEGATLP
Sequences:
>Translated_349_residues MDRLNFEGWSPIRIYREPGGAVLVDWMRASPEVTRRPFFADGVQSAMQWPFHQAFRRQTPLADLIGWAQASPGLQPSGIV FHVSRCGSTLVTQAFAALDDHVALSEPPPLDDLLRAEHRLPGLDPAQALRAARAFASAWARPSPPGRRGHLVIKYDCWAT ALAGRIAEAWPDTPWLFLYRDPLEVLVSQMQQRAAYLIPGGPLGVNPAAIPFDEALRIGPEAYCARSLGSIYAALVREFR PERTLLLDYRQLPAAIPETIAPHFGMQPGAQAIERMQATFGVHAKNPSHPFTPDARRKHREAPQRLRELAQEWIAPHHDA LERLRARQDRGAAANSVEAGARAEGATLP >Mature_349_residues MDRLNFEGWSPIRIYREPGGAVLVDWMRASPEVTRRPFFADGVQSAMQWPFHQAFRRQTPLADLIGWAQASPGLQPSGIV FHVSRCGSTLVTQAFAALDDHVALSEPPPLDDLLRAEHRLPGLDPAQALRAARAFASAWARPSPPGRRGHLVIKYDCWAT ALAGRIAEAWPDTPWLFLYRDPLEVLVSQMQQRAAYLIPGGPLGVNPAAIPFDEALRIGPEAYCARSLGSIYAALVREFR PERTLLLDYRQLPAAIPETIAPHFGMQPGAQAIERMQATFGVHAKNPSHPFTPDARRKHREAPQRLRELAQEWIAPHHDA LERLRARQDRGAAANSVEAGARAEGATLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38639; Mature: 38639
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLNFEGWSPIRIYREPGGAVLVDWMRASPEVTRRPFFADGVQSAMQWPFHQAFRRQTP CCCCCCCCCCCEEEEECCCCEEEEHHHHCCCHHHHCCCHHHHHHHHHHCHHHHHHHHCCC LADLIGWAQASPGLQPSGIVFHVSRCGSTLVTQAFAALDDHVALSEPPPLDDLLRAEHRL HHHHHHHHHCCCCCCCCCEEEEHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC PGLDPAQALRAARAFASAWARPSPPGRRGHLVIKYDCWATALAGRIAEAWPDTPWLFLYR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEC DPLEVLVSQMQQRAAYLIPGGPLGVNPAAIPFDEALRIGPEAYCARSLGSIYAALVREFR CHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PERTLLLDYRQLPAAIPETIAPHFGMQPGAQAIERMQATFGVHAKNPSHPFTPDARRKHR CCHHEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH EAPQRLRELAQEWIAPHHDALERLRARQDRGAAANSVEAGARAEGATLP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRLNFEGWSPIRIYREPGGAVLVDWMRASPEVTRRPFFADGVQSAMQWPFHQAFRRQTP CCCCCCCCCCCEEEEECCCCEEEEHHHHCCCHHHHCCCHHHHHHHHHHCHHHHHHHHCCC LADLIGWAQASPGLQPSGIVFHVSRCGSTLVTQAFAALDDHVALSEPPPLDDLLRAEHRL HHHHHHHHHCCCCCCCCCEEEEHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC PGLDPAQALRAARAFASAWARPSPPGRRGHLVIKYDCWATALAGRIAEAWPDTPWLFLYR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEC DPLEVLVSQMQQRAAYLIPGGPLGVNPAAIPFDEALRIGPEAYCARSLGSIYAALVREFR CHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PERTLLLDYRQLPAAIPETIAPHFGMQPGAQAIERMQATFGVHAKNPSHPFTPDARRKHR CCHHEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH EAPQRLRELAQEWIAPHHDALERLRARQDRGAAANSVEAGARAEGATLP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA