| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is folC [H]
Identifier: 120610540
GI number: 120610540
Start: 2014623
End: 2015948
Strand: Direct
Name: folC [H]
Synonym: Aave_1860
Alternate gene names: 120610540
Gene position: 2014623-2015948 (Clockwise)
Preceding gene: 120610535
Following gene: 120610541
Centisome position: 37.64
GC content: 69.98
Gene sequence:
>1326_bases ATGCACACCACTTTCGACACCCTGGACGGCTGGCTGGCCCATTGCGAACGCATCCACCCGAAAACCATCGACATGGGCCT GGAGCGGGTGGGCGAGGTGGCGCGCCGGCTCGGGCTGCGTTTCACCTGCCCCGTCATCACGGTGGCCGGCACGAACGGCA AGGGTTCCACCTGCGCCATGCTGGAGGCGGTGGCGCTGCAGTCGGGCTACCGCACCGGCGTCTATACCTCGCCGCACCTC GTGAAGTTCGAGGAGCGCTGCCGCATCCGGGGCGAGAGTGTCGGGGCGGACGATCTGGTCCCGCACTTCGCGGCCGTGGA GGCGGCGAGAACGCATGGCGGCGCGGAGGTGTCCCTGTCCTACTTCGAGTTCACCACGCTCGCCATCCTGCGCCTCATGA GCCAGGCGGGCCTGGATGTCGCCATCCTGGAGGTGGGCCTGGGCGGCCGCCTCGACGCGACCAATGTCGTGGATACCGAC TGCGCGGTCATCACCAGCATCGACATCGACCACACGGAGTTCCTGGGACCGGACCGCGAATCCATCGGCCGGGAGAAGGC CGGCATCATGCGGCCGGGCCGTCCCGCCATCGTCAGCGACCCCATGGCACCGCAGAGCGTGCTGGACCACGCGCGCGCCC TCGGAGCCGACCTGTGGCAGTTCGGCCAGGACTTCAATTTTTCCGGCGACAAGCAGCAGTGGGCCTGGGCGGGGCGGGGT CGCCGCTATGCCGGGCTGGCCTACCCGGCACTGCGGGGGGCCAACCAGCTGGTCAACGCCTCCGGCGTGCTGGCCGCCCT GGAGGCGCTGCGCGACCGGCTGCCGATCACGGCCCAGGCCGTGCGCACCGGCCTGGCCATGGTGGAGCTGCCGGGGCGCT TCCAGATCGTCCCGGGCCAGCCCACCCTGGTACTGGACGTGGCCCACAACCCGCATTCGGTGGCGGCGCTCACCGCCAAC CTGGACGCCATGGGCTTTTTCCCGACCACCCATGCGGTGTTCGGCGCCATGGCCGACAAGGACCTCGCTCCCATGCTGGC CCGCATCGGCCCGCTGGTGGACCGCTGGTACTTCACCGACCTGCCGACGCCGCGTGCCGAAACCGCCGCCGCCCTGCAGC AGAAGTGGAACGCCCTGCAGATCGTCGCCGGCGGACGCCGCGAAGTGCGCACCAGCCTGCACCCGGACCCATGGCAGGCG CTGCAGGCGGCCGTGGCCGCTGCAGAGCCGACTGATAGAATCGTGGTCTTTGGCTCCTTCTATACGGTCGGCGGTGTGCT GCACCACGGAACGCCCCGCCTGCAGGCCAAGCACCTGGGCACTTGA
Upstream 100 bases:
>100_bases TTGACCGTGTCGCAGTTGGGAATGCCATAGACGATGGGGGTGGGGGTACTCATGCGCCCGATCATCCTGCAACGCCGCCT CGGCGACAATCGCCGGCTCT
Downstream 100 bases:
>100_bases GCATCCGACAGCGCACTCCCCGCACTGCATCCATGGCATTTTTCAAGTTTCGTTGGCCCGGCCGCAAGGAGCAGCCCGAG CAGCCCGCAAAGCCCGCCAA
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase [H]
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MHTTFDTLDGWLAHCERIHPKTIDMGLERVGEVARRLGLRFTCPVITVAGTNGKGSTCAMLEAVALQSGYRTGVYTSPHL VKFEERCRIRGESVGADDLVPHFAAVEAARTHGGAEVSLSYFEFTTLAILRLMSQAGLDVAILEVGLGGRLDATNVVDTD CAVITSIDIDHTEFLGPDRESIGREKAGIMRPGRPAIVSDPMAPQSVLDHARALGADLWQFGQDFNFSGDKQQWAWAGRG RRYAGLAYPALRGANQLVNASGVLAALEALRDRLPITAQAVRTGLAMVELPGRFQIVPGQPTLVLDVAHNPHSVAALTAN LDAMGFFPTTHAVFGAMADKDLAPMLARIGPLVDRWYFTDLPTPRAETAAALQQKWNALQIVAGGRREVRTSLHPDPWQA LQAAVAAAEPTDRIVVFGSFYTVGGVLHHGTPRLQAKHLGT
Sequences:
>Translated_441_residues MHTTFDTLDGWLAHCERIHPKTIDMGLERVGEVARRLGLRFTCPVITVAGTNGKGSTCAMLEAVALQSGYRTGVYTSPHL VKFEERCRIRGESVGADDLVPHFAAVEAARTHGGAEVSLSYFEFTTLAILRLMSQAGLDVAILEVGLGGRLDATNVVDTD CAVITSIDIDHTEFLGPDRESIGREKAGIMRPGRPAIVSDPMAPQSVLDHARALGADLWQFGQDFNFSGDKQQWAWAGRG RRYAGLAYPALRGANQLVNASGVLAALEALRDRLPITAQAVRTGLAMVELPGRFQIVPGQPTLVLDVAHNPHSVAALTAN LDAMGFFPTTHAVFGAMADKDLAPMLARIGPLVDRWYFTDLPTPRAETAAALQQKWNALQIVAGGRREVRTSLHPDPWQA LQAAVAAAEPTDRIVVFGSFYTVGGVLHHGTPRLQAKHLGT >Mature_441_residues MHTTFDTLDGWLAHCERIHPKTIDMGLERVGEVARRLGLRFTCPVITVAGTNGKGSTCAMLEAVALQSGYRTGVYTSPHL VKFEERCRIRGESVGADDLVPHFAAVEAARTHGGAEVSLSYFEFTTLAILRLMSQAGLDVAILEVGLGGRLDATNVVDTD CAVITSIDIDHTEFLGPDRESIGREKAGIMRPGRPAIVSDPMAPQSVLDHARALGADLWQFGQDFNFSGDKQQWAWAGRG RRYAGLAYPALRGANQLVNASGVLAALEALRDRLPITAQAVRTGLAMVELPGRFQIVPGQPTLVLDVAHNPHSVAALTAN LDAMGFFPTTHAVFGAMADKDLAPMLARIGPLVDRWYFTDLPTPRAETAAALQQKWNALQIVAGGRREVRTSLHPDPWQA LQAAVAAAEPTDRIVVFGSFYTVGGVLHHGTPRLQAKHLGT
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=410, Percent_Identity=30.7317073170732, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI66932990, Length=410, Percent_Identity=30.7317073170732, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1788654, Length=422, Percent_Identity=44.3127962085308, Blast_Score=326, Evalue=2e-90, Organism=Caenorhabditis elegans, GI17553150, Length=303, Percent_Identity=30.6930693069307, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71984923, Length=303, Percent_Identity=30.6930693069307, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17553148, Length=303, Percent_Identity=30.6930693069307, Blast_Score=123, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6323760, Length=442, Percent_Identity=29.4117647058824, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324815, Length=199, Percent_Identity=31.6582914572864, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24641571, Length=295, Percent_Identity=30.5084745762712, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24581568, Length=167, Percent_Identity=35.9281437125749, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17; =6.3.2.12 [H]
Molecular weight: Translated: 47501; Mature: 47501
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTTFDTLDGWLAHCERIHPKTIDMGLERVGEVARRLGLRFTCPVITVAGTNGKGSTCAM CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCEEEEECCCCCCCHHHH LEAVALQSGYRTGVYTSPHLVKFEERCRIRGESVGADDLVPHFAAVEAARTHGGAEVSLS HHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEH YFEFTTLAILRLMSQAGLDVAILEVGLGGRLDATNVVDTDCAVITSIDIDHTEFLGPDRE HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCHH SIGREKAGIMRPGRPAIVSDPMAPQSVLDHARALGADLWQFGQDFNFSGDKQQWAWAGRG HHCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC RRYAGLAYPALRGANQLVNASGVLAALEALRDRLPITAQAVRTGLAMVELPGRFQIVPGQ CEEECCCCHHHHCHHHHHCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCEEEECCC PTLVLDVAHNPHSVAALTANLDAMGFFPTTHAVFGAMADKDLAPMLARIGPLVDRWYFTD CEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECC LPTPRAETAAALQQKWNALQIVAGGRREVRTSLHPDPWQALQAAVAAAEPTDRIVVFGSF CCCCCHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECH YTVGGVLHHGTPRLQAKHLGT HHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTTFDTLDGWLAHCERIHPKTIDMGLERVGEVARRLGLRFTCPVITVAGTNGKGSTCAM CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCEEEEECCCCCCCHHHH LEAVALQSGYRTGVYTSPHLVKFEERCRIRGESVGADDLVPHFAAVEAARTHGGAEVSLS HHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEH YFEFTTLAILRLMSQAGLDVAILEVGLGGRLDATNVVDTDCAVITSIDIDHTEFLGPDRE HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCHH SIGREKAGIMRPGRPAIVSDPMAPQSVLDHARALGADLWQFGQDFNFSGDKQQWAWAGRG HHCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC RRYAGLAYPALRGANQLVNASGVLAALEALRDRLPITAQAVRTGLAMVELPGRFQIVPGQ CEEECCCCHHHHCHHHHHCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCEEEECCC PTLVLDVAHNPHSVAALTANLDAMGFFPTTHAVFGAMADKDLAPMLARIGPLVDRWYFTD CEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECC LPTPRAETAAALQQKWNALQIVAGGRREVRTSLHPDPWQALQAAVAAAEPTDRIVVFGSF CCCCCHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECH YTVGGVLHHGTPRLQAKHLGT HHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3040739; 3040734; 9205837; 9278503; 1989505 [H]