| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is murB [H]
Identifier: 120610535
GI number: 120610535
Start: 2010341
End: 2011414
Strand: Direct
Name: murB [H]
Synonym: Aave_1855
Alternate gene names: 120610535
Gene position: 2010341-2011414 (Clockwise)
Preceding gene: 120610531
Following gene: 120610540
Centisome position: 37.56
GC content: 70.76
Gene sequence:
>1074_bases ATGTTAGTCGAGAAAAACGTCCCCCTGCAGGCCTGCAACACCTTCGGCATCGTGGCGCGCGCCCATACGCTGGTGCGTGC GCGCTCGGCCGGCGACGTGCGGGCGCTGCTCGCCGATCCGCAACTCGGCGCCGGCCCGCTGTTCGTGCTGGGCGGGGGCA GCAACATCGTGCTCACGGGCGACGTGAAGCCCGTCGTGCTCAAGATGGAGATCCCGGGCATCCGCCTGGTCGAGGAAACC CCGCGCGCCTGGATCGTGGAGGCCGGCGCGGGCGAGCGCTGGCACGACGCGGTCGCCTGGACGCTCGAGCATGGCTTTCC GGGGCTGGAGAACCTGGCCCTCATTCCCGGCACCGTGGGCGCCGCCCCCGTGCAGAACATCGGCGCGTACGGCGTCGAGC TGCAGGACCGTTTCGACTCGCTGGACGCCATCGACCTCGCCACGGGCCGCCCGTTCTCGCTGGACGCCGCCCAGTGCGCC TTCGGCTACCGCGACTCCGTCTTCAAGCACGCGCCCGCCGGCAACGGGGCCGATACCGGCCTGCCCCGGGGGATGGGCCT GGCGGGCCGGGCGGTCATCACCCATGTCCGCTTCCGCCTGCCCAAGCCCTGGAGGCCCGAACTGGGCTACCTGGACCTGG AGCGCAAGCGCCAGGAGGCGGGCGTGGAGCAGCCCACGGCCCGCCAGATCTTCGACTGGGTGTGCGAGGTGCGCCGCGCC AAGCTGCCCGATCCGGCCGTGCTCGGCAATGCCGGCAGCTTCTTCAAGAACCCGACCGTGACGCCGGAGCAGTGCTCGGA CATCATCGCGCGCGACCCCAAGATCGTGCACTACCCGATGCCGGACGGCACCATCAAGCTCGCGGCCGGCTGGCTCATCG ATGCCTGCGGCTGGAAGGGCAAGACCGTCGGCAAGGCCGGCGTGTACGAGAAGCAGGCCCTGGTGCTGGTCAACCGCGGC CGCGGTGGCGACAGCGTCACGGGCGGCGAGGTGATGACGCTGGCCAAGGCCATCCAGACGAGCGTCTATGAGCGCTTCGG CATCCGGCTCGAACCCGAGCCGGTCGTGGTCTGA
Upstream 100 bases:
>100_bases GGTTGGCTTCACAGACGGTATCAAAAGAAGGCATGGCTTCGCTCTCGGTATCTCGGGTGGGGGGCCTCGCCGGCGAGGCC CGAATGCGACAATCCGGTGG
Downstream 100 bases:
>100_bases GCCGGCCGCGAGGTCCGGGCCGCCGGACGTGAAAAAACCGCCCGGCCTTGCGGCGGAGCGGTTTCTCCGGGAGCGTGCCT GCCGCGGACGGCAGGGCCGC
Product: UDP-N-acetylmuramate dehydrogenase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MLVEKNVPLQACNTFGIVARAHTLVRARSAGDVRALLADPQLGAGPLFVLGGGSNIVLTGDVKPVVLKMEIPGIRLVEET PRAWIVEAGAGERWHDAVAWTLEHGFPGLENLALIPGTVGAAPVQNIGAYGVELQDRFDSLDAIDLATGRPFSLDAAQCA FGYRDSVFKHAPAGNGADTGLPRGMGLAGRAVITHVRFRLPKPWRPELGYLDLERKRQEAGVEQPTARQIFDWVCEVRRA KLPDPAVLGNAGSFFKNPTVTPEQCSDIIARDPKIVHYPMPDGTIKLAAGWLIDACGWKGKTVGKAGVYEKQALVLVNRG RGGDSVTGGEVMTLAKAIQTSVYERFGIRLEPEPVVV
Sequences:
>Translated_357_residues MLVEKNVPLQACNTFGIVARAHTLVRARSAGDVRALLADPQLGAGPLFVLGGGSNIVLTGDVKPVVLKMEIPGIRLVEET PRAWIVEAGAGERWHDAVAWTLEHGFPGLENLALIPGTVGAAPVQNIGAYGVELQDRFDSLDAIDLATGRPFSLDAAQCA FGYRDSVFKHAPAGNGADTGLPRGMGLAGRAVITHVRFRLPKPWRPELGYLDLERKRQEAGVEQPTARQIFDWVCEVRRA KLPDPAVLGNAGSFFKNPTVTPEQCSDIIARDPKIVHYPMPDGTIKLAAGWLIDACGWKGKTVGKAGVYEKQALVLVNRG RGGDSVTGGEVMTLAKAIQTSVYERFGIRLEPEPVVV >Mature_357_residues MLVEKNVPLQACNTFGIVARAHTLVRARSAGDVRALLADPQLGAGPLFVLGGGSNIVLTGDVKPVVLKMEIPGIRLVEET PRAWIVEAGAGERWHDAVAWTLEHGFPGLENLALIPGTVGAAPVQNIGAYGVELQDRFDSLDAIDLATGRPFSLDAAQCA FGYRDSVFKHAPAGNGADTGLPRGMGLAGRAVITHVRFRLPKPWRPELGYLDLERKRQEAGVEQPTARQIFDWVCEVRRA KLPDPAVLGNAGSFFKNPTVTPEQCSDIIARDPKIVHYPMPDGTIKLAAGWLIDACGWKGKTVGKAGVYEKQALVLVNRG RGGDSVTGGEVMTLAKAIQTSVYERFGIRLEPEPVVV
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=351, Percent_Identity=44.4444444444444, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 38335; Mature: 38335
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVEKNVPLQACNTFGIVARAHTLVRARSAGDVRALLADPQLGAGPLFVLGGGSNIVLTG CCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEC DVKPVVLKMEIPGIRLVEETPRAWIVEAGAGERWHDAVAWTLEHGFPGLENLALIPGTVG CCCEEEEEEECCCEEEEECCCCEEEEECCCCCCCHHHEEEEEECCCCCCCCEEECCCCCC AAPVQNIGAYGVELQDRFDSLDAIDLATGRPFSLDAAQCAFGYRDSVFKHAPAGNGADTG CCCHHHCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCC LPRGMGLAGRAVITHVRFRLPKPWRPELGYLDLERKRQEAGVEQPTARQIFDWVCEVRRA CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHC KLPDPAVLGNAGSFFKNPTVTPEQCSDIIARDPKIVHYPMPDGTIKLAAGWLIDACGWKG CCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEECEEEECCCCCC KTVGKAGVYEKQALVLVNRGRGGDSVTGGEVMTLAKAIQTSVYERFGIRLEPEPVVV CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCC >Mature Secondary Structure MLVEKNVPLQACNTFGIVARAHTLVRARSAGDVRALLADPQLGAGPLFVLGGGSNIVLTG CCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEC DVKPVVLKMEIPGIRLVEETPRAWIVEAGAGERWHDAVAWTLEHGFPGLENLALIPGTVG CCCEEEEEEECCCEEEEECCCCEEEEECCCCCCCHHHEEEEEECCCCCCCCEEECCCCCC AAPVQNIGAYGVELQDRFDSLDAIDLATGRPFSLDAAQCAFGYRDSVFKHAPAGNGADTG CCCHHHCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCC LPRGMGLAGRAVITHVRFRLPKPWRPELGYLDLERKRQEAGVEQPTARQIFDWVCEVRRA CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHC KLPDPAVLGNAGSFFKNPTVTPEQCSDIIARDPKIVHYPMPDGTIKLAAGWLIDACGWKG CCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEECEEEECCCCCC KTVGKAGVYEKQALVLVNRGRGGDSVTGGEVMTLAKAIQTSVYERFGIRLEPEPVVV CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA