| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610498
Identifier: 120610498
GI number: 120610498
Start: 1972354
End: 1973370
Strand: Direct
Name: 120610498
Synonym: Aave_1818
Alternate gene names: NA
Gene position: 1972354-1973370 (Clockwise)
Preceding gene: 120610497
Following gene: 120610499
Centisome position: 36.85
GC content: 71.68
Gene sequence:
>1017_bases ATGAACGACCACCCATCCCCGCCGCCGCACTCCCGTGACGGCCCGCCCGCCCCCGAACCGGCCGATGCGCTGCTGCGCCC CGTGGCCCACCTGGAGCGCAAGGCCGCCGCGCTGCTGCTCTTCACCCTGGCGCTGATCATCGGCTCGGGCCTGTACCTGC TCTACGCGCGCGGCGTGTTCGAGCCCACGCAGCAACTGGTGCTCACCGCCGACGACTCCGAAGGCGTGGTCGCCGGCATG GACATGACGTTCTCGGGCTTTCCCATCGGCCGGGTCCGCCGCACCGAACTGGCCGAGGGCGGCGACGTGCGCATCCTGAT CGACGTGCCGCGCAAGGACGCGCACTGGCTGCGCGAATCGAGCGTGTTCACCCTGGTGCGCGGCATCGTGGGCGGCACCA CGATCAAGGCCTACAGCGGCATCCTGACCGATCCGCCCCTGCCCGACGGCGCGGTGCGCCCGGTGCTGCGCGGCGATGCC ACCGCCGAGATCCCGCAGCTCATGTCGGCCGCGCGCGAACTGCTCTCCAACCTGCAGGCCCTCACCGCGCAGGATGCCGC GCTGGGCGGCACGCTGGCCAATGTGCGCACCCTCACCGAACGGTTGAACGCGCCCGGCGGCGCCCTGGGCGTGCTGATGG GCAGCGAGGCCGAGGCGCGCAAGATCGCCACCACGCTGGACCGCACCAACCAGTTGCTGGCGCGCATCGACGGCATGGCC GCCAAGGCGGACCGGCAAGTCTTCGGCACGGCCGGCGAGGCGGGGCTCGTCACCGACGTGCGCGCCACCGTGGTGCAGCT CAACGGCCTGCTCGCGGACACGCGCCAGAGCCTGGCCAAGGTGGATGCCGTGCTGGCCGAAGCCCAGGCCATCGGGGCCA ACGCCCGAGAGGCCACCACCGACCTCGGCGCCCTGCGCGCCGATGTGGAAAGCAACCTGCGCAAGGTCGAGAGCCTGGTC AACGAGATCCAGCGCAAATGGCCCTTCGCGCGCGACACCCGGATCGAACTGCCATGA
Upstream 100 bases:
>100_bases TCGGCGGCTTCGCGCGGATGTTCGCGGTGCTGCTGCTGATCGAGATCGCATCGCTCATGGGCAACTACTACTGATTGACG CTTTCCCCGGACCGCTTCCG
Downstream 100 bases:
>100_bases GCCCCGCACCCACGTTCCGCCGGCCTGCCCTGTCCGGGCGTTACGGCGCGCTCCTGGCCGCGATGCTGGCTGCCGCGCTG GCCACCGGCTGCGCCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Transport System Periplasmic Component; Mammalian Cell Entry Related Protein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MNDHPSPPPHSRDGPPAPEPADALLRPVAHLERKAAALLLFTLALIIGSGLYLLYARGVFEPTQQLVLTADDSEGVVAGM DMTFSGFPIGRVRRTELAEGGDVRILIDVPRKDAHWLRESSVFTLVRGIVGGTTIKAYSGILTDPPLPDGAVRPVLRGDA TAEIPQLMSAARELLSNLQALTAQDAALGGTLANVRTLTERLNAPGGALGVLMGSEAEARKIATTLDRTNQLLARIDGMA AKADRQVFGTAGEAGLVTDVRATVVQLNGLLADTRQSLAKVDAVLAEAQAIGANAREATTDLGALRADVESNLRKVESLV NEIQRKWPFARDTRIELP
Sequences:
>Translated_338_residues MNDHPSPPPHSRDGPPAPEPADALLRPVAHLERKAAALLLFTLALIIGSGLYLLYARGVFEPTQQLVLTADDSEGVVAGM DMTFSGFPIGRVRRTELAEGGDVRILIDVPRKDAHWLRESSVFTLVRGIVGGTTIKAYSGILTDPPLPDGAVRPVLRGDA TAEIPQLMSAARELLSNLQALTAQDAALGGTLANVRTLTERLNAPGGALGVLMGSEAEARKIATTLDRTNQLLARIDGMA AKADRQVFGTAGEAGLVTDVRATVVQLNGLLADTRQSLAKVDAVLAEAQAIGANAREATTDLGALRADVESNLRKVESLV NEIQRKWPFARDTRIELP >Mature_338_residues MNDHPSPPPHSRDGPPAPEPADALLRPVAHLERKAAALLLFTLALIIGSGLYLLYARGVFEPTQQLVLTADDSEGVVAGM DMTFSGFPIGRVRRTELAEGGDVRILIDVPRKDAHWLRESSVFTLVRGIVGGTTIKAYSGILTDPPLPDGAVRPVLRGDA TAEIPQLMSAARELLSNLQALTAQDAALGGTLANVRTLTERLNAPGGALGVLMGSEAEARKIATTLDRTNQLLARIDGMA AKADRQVFGTAGEAGLVTDVRATVVQLNGLLADTRQSLAKVDAVLAEAQAIGANAREATTDLGALRADVESNLRKVESLV NEIQRKWPFARDTRIELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35876; Mature: 35876
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDHPSPPPHSRDGPPAPEPADALLRPVAHLERKAAALLLFTLALIIGSGLYLLYARGVF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC EPTQQLVLTADDSEGVVAGMDMTFSGFPIGRVRRTELAEGGDVRILIDVPRKDAHWLRES CCCCCEEEEECCCCCEEEECCCEECCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHH SVFTLVRGIVGGTTIKAYSGILTDPPLPDGAVRPVLRGDATAEIPQLMSAARELLSNLQA HHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH LTAQDAALGGTLANVRTLTERLNAPGGALGVLMGSEAEARKIATTLDRTNQLLARIDGMA HHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AKADRQVFGTAGEAGLVTDVRATVVQLNGLLADTRQSLAKVDAVLAEAQAIGANAREATT HHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH DLGALRADVESNLRKVESLVNEIQRKWPFARDTRIELP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC >Mature Secondary Structure MNDHPSPPPHSRDGPPAPEPADALLRPVAHLERKAAALLLFTLALIIGSGLYLLYARGVF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC EPTQQLVLTADDSEGVVAGMDMTFSGFPIGRVRRTELAEGGDVRILIDVPRKDAHWLRES CCCCCEEEEECCCCCEEEECCCEECCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHH SVFTLVRGIVGGTTIKAYSGILTDPPLPDGAVRPVLRGDATAEIPQLMSAARELLSNLQA HHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH LTAQDAALGGTLANVRTLTERLNAPGGALGVLMGSEAEARKIATTLDRTNQLLARIDGMA HHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AKADRQVFGTAGEAGLVTDVRATVVQLNGLLADTRQSLAKVDAVLAEAQAIGANAREATT HHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH DLGALRADVESNLRKVESLVNEIQRKWPFARDTRIELP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA