| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610497
Identifier: 120610497
GI number: 120610497
Start: 1971527
End: 1972327
Strand: Direct
Name: 120610497
Synonym: Aave_1817
Alternate gene names: NA
Gene position: 1971527-1972327 (Clockwise)
Preceding gene: 120610496
Following gene: 120610498
Centisome position: 36.83
GC content: 71.04
Gene sequence:
>801_bases ATGAGCACCGCAGCGGGCGCCCTCCCGGGATGGACCGGCCGGCTGTGGCGCGCCTCGCGCGGCTGGGCCCTGGCCTGGTG GCGCATCGTCCACCTGGGGGCGGTGGTGGCGGTGCTGATGCTGTCGCCGTCCAGCTACGGCCGGTTCACCCGCGCGCGCC TGGCCCGGCACATGTATCTCGATACGGCGCCCCTGCTGCTGGGCTTCACCGCGCTGGTGGCGCTCATCTGTCTGGTGGTG ACGCACATCGTCGTCATCACGGCGCGCAGCTACGGCCTGTCGCACTATGCGCTGCAGATGGTGGTGCGGGTGCTCGTGCT GGAGCTGATCCCGCTCACGGCGGCACTGTTCGTGGCGCTGCGCACCACGATCCCCGGCGGCACGCAGCTGGCCCTCATGC GGCAGTCGGGCCACTGGGATGCGCTGCGCGCGCGCGGTGCCGACCCTGTCCGCGTGGAGCTGCTGCCGCGCGTCGTGGCC GGCATGTATGCCAGCATCACGCTCGCCGCGCTGTCGTGCGTGGTCGCCCTCGTGATGGCCTACCTGGGCGTCTATGGCGC GAGCACGGCGGGCGTGCCCGCCTACACCCGCATGTTCGGGCAGGTGTTCACGCCGCCCCTCACCCTGCTGTTCGTGCTCA AGACGCTGCTGTTCAGCCTGGCCGTCGCGCTCATTCCCATGGCCGCGGGCCTGCATGCCACGGGCGACCCGCGCGCGCGC TCCGAACTCGGCGGCTTCGCGCGGATGTTCGCGGTGCTGCTGCTGATCGAGATCGCATCGCTCATGGGCAACTACTACTG A
Upstream 100 bases:
>100_bases TCCGCCGGCGCGCCGGCATGTGTGACCGCCTTCCGTCGATGTCCCCGCAGCCGTCCCTGACCAAAACCCCGACCGCCCGC CGCTTGACGGAGGAGGGCGC
Downstream 100 bases:
>100_bases TTGACGCTTTCCCCGGACCGCTTCCGATGAACGACCACCCATCCCCGCCGCCGCACTCCCGTGACGGCCCGCCCGCCCCC GAACCGGCCGATGCGCTGCT
Product: ABC-type transport system permease
Products: NA
Alternate protein names: ABC-Type Transport System Permease; ABC-Type Transport System Permease Component; ABC Transporter Permease Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSTAAGALPGWTGRLWRASRGWALAWWRIVHLGAVVAVLMLSPSSYGRFTRARLARHMYLDTAPLLLGFTALVALICLVV THIVVITARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARGADPVRVELLPRVVA GMYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPPLTLLFVLKTLLFSLAVALIPMAAGLHATGDPRAR SELGGFARMFAVLLLIEIASLMGNYY
Sequences:
>Translated_266_residues MSTAAGALPGWTGRLWRASRGWALAWWRIVHLGAVVAVLMLSPSSYGRFTRARLARHMYLDTAPLLLGFTALVALICLVV THIVVITARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARGADPVRVELLPRVVA GMYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPPLTLLFVLKTLLFSLAVALIPMAAGLHATGDPRAR SELGGFARMFAVLLLIEIASLMGNYY >Mature_265_residues STAAGALPGWTGRLWRASRGWALAWWRIVHLGAVVAVLMLSPSSYGRFTRARLARHMYLDTAPLLLGFTALVALICLVVT HIVVITARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARGADPVRVELLPRVVAG MYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPPLTLLFVLKTLLFSLAVALIPMAAGLHATGDPRARS ELGGFARMFAVLLLIEIASLMGNYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28623; Mature: 28492
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAAGALPGWTGRLWRASRGWALAWWRIVHLGAVVAVLMLSPSSYGRFTRARLARHMYL CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DTAPLLLGFTALVALICLVVTHIVVITARSYGLSHYALQMVVRVLVLELIPLTAALFVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTTIPGGTQLALMRQSGHWDALRARGADPVRVELLPRVVAGMYASITLAALSCVVALVMA HHCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGVYGASTAGVPAYTRMFGQVFTPPLTLLFVLKTLLFSLAVALIPMAAGLHATGDPRAR HHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SELGGFARMFAVLLLIEIASLMGNYY HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STAAGALPGWTGRLWRASRGWALAWWRIVHLGAVVAVLMLSPSSYGRFTRARLARHMYL CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DTAPLLLGFTALVALICLVVTHIVVITARSYGLSHYALQMVVRVLVLELIPLTAALFVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTTIPGGTQLALMRQSGHWDALRARGADPVRVELLPRVVAGMYASITLAALSCVVALVMA HHCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGVYGASTAGVPAYTRMFGQVFTPPLTLLFVLKTLLFSLAVALIPMAAGLHATGDPRAR HHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SELGGFARMFAVLLLIEIASLMGNYY HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA