| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610483
Identifier: 120610483
GI number: 120610483
Start: 1954866
End: 1957109
Strand: Direct
Name: 120610483
Synonym: Aave_1802
Alternate gene names: NA
Gene position: 1954866-1957109 (Clockwise)
Preceding gene: 120610482
Following gene: 120610488
Centisome position: 36.52
GC content: 75.13
Gene sequence:
>2244_bases ATGCCCGCCATCGCCCCCACCGCCCGGTTGGCTTTCCGTGCCTGCGTCGTGGCAGCCATCCGCGACGGCGAGGCGATGAT GGAGGCACTGGTGGCGCAAACGCGCGATGCCCTGGAGGCCGAGGTGCCGCTGGCGCGCGAGCCCCGGCGGCGCGATGCGC TGGAGGGCGCCCGCGCGCTGCTGGCGCAGCACGCCCCCGCGCTGGTGCGGGGCTTCCCCATGGCCCTGCTGGAGATCTTC GCGGGCGCCGATCCGGACGCCCGGGCGAGGCCTTCCGAGCCCGCGGGGCTGGACTTCGGCGAGCTGTCCCTGATGGACGA GGCCGAGGTCATGGCGCAGGTGGAACTGTCGCGCGCCCAGCAGGTGGCACTGCATGCCACCGAAGCCATGCTGGCGGAGC TGGACGCGCTGGTGAGCGCGGCCCAGGGCCTGCCCAGCGTGCAACCCGACCGCAATCCATTGCGACCGGGGAACTACATC CGCGCCCTGCAGCAGGTGGTGGGCGCCGCAGGGGTTTCATCTGACGTGCGCACCCTCTGGATGGCACCGCTGCGCAATGC CCTGGGCACCCAGCTCCAGGCCGCCTACCGCAGCGCCGCCGCCCGGCTCCGCGAGGACGGCGTGCAGCCCGTGGGCTATG CGGTCGCGGGCCATGCCGCGGGGCGGGGCGCCGCCGGGCGCTGGCAGGGGCCGGTGACCGGCTGGAGCGGCATGGCGGGC ACGCCGCTGCCGCCGTCCCAGCCGGCAGTCCTGGCGCCCGACGCCGAGGAAGCCCTGCTCACCGTCGCCATGCTCCGGCA GATGCTGGCCCAGCCTATGGGGCTGGCGGCACCGGTGGCCGCTTTTCCAGGCGGTGGTCTCGCCGCTGCCGCGGCCGAGG CGATGGAAGACATCGCCGAGCTCGAACGCATCGTGGGCCGCCTGTCCGGCAGCCTGCCCGCGCCGCTCGCGGCCGACGCG CCCGCGGCGGCGCATCCGGACATGGCAGCGGCTGCCATCGCGCAGCCGGCAGCCGGCCCGGCCGACGCGCCCGCACGGCC CCGGTCGCGTACCGCCAGCGAGGTGGTGAGCCGCATGATGGACAACATCGCGCAGGACGACCGCCTGCTGCCTCCCGTGC AGCGCTCGCTGCAGAACCTGCGCCCGGCGCTGCAGCGCCTGGTGCGGCACGATCCGCGCTTTTTCACCGACGACCGGCAT CCCGCGCGCCGCCTGCTGGACGCGCTCACCCAGCGGGCGCTGTCCTTCGATTCCGAGGACGTGCAGGATTTCAGCGGCTT CGCGCGCCTCATGGAGCGGGCCGTGGACAGCGTGACCTCGGGCGACACGCGCAGCGCCGACACCTTCGCGGCCGCCCTGG CGGGGCTGGAAGCCGGCTGGTCCGAGCAGGACCGGCGCCGCCGCGAGCGGGAGGAGTCCGCGCGCGCCGTGGCGCAGGAA CTGACGCGCCGCGAGGCGCTGTCACGCCGCGTGTCGCAGGACATCCGTGCGCTGGCCCGCACCGAGGACGTGCCGCCGGA CATCGTGGAGTTCGCCGCGGGCCCCTGGGCCGACGTGGTGGCGCGCGCCCAGGCGGACCGGCCCGGCGAGGACGACCCCG GCGGCTACCTCGCGGTCGTGCCCGAGCTGTTCTGGCTCGCCCAGCCCGCGCTCGCGGCCCGCACGCCCGAGCGCCTGGCC CCGGCCGTCACGCGCATCCTGGGCGTGCTGCGCGGTGGGCTGGACAGCGTGGGCCACGACGAAGGCATGACCGCCGCCAT CCTGGAGCGCGTCGCGGCCCTGCACCAGGCGGCGGCGGAGCAGGCCGCCGCCCGCGCAGGCGAGGCCACGGACTCCGGAA TGCCGCAGACCGGCCACTCCCTGCTGGAGCCCGAGGAGTCCGAGGAGTCCGAGGAGTCCGAAAAGGTCGAAGAGGCCGAA GAGGCCGAAGAGGCCGAAGAGGCCGGCGAGGACCGGGCCGGGGATGCCGCCACGCCCACCGACGGGGCGAACGCCTCCGG CGGCGAACTTTCCATCGGCACCTGGGTGGAACTCGCCACCCATCACCGCGCGGTGCATACGCAGCTCACCTGGGCCAGCC CGCACCACACGCTGTTCCTGTTCACCGCCCCCGACGGCAGCACGCAGTCCATGACGCGGCGCGTGCGGGACAAGCTCATG GCAGACGGCGCGCTCAAGGTGCTGCCGGGGCCTCCGGCGAAGATCCGGTCCCCCCGGGGCGTATCGCGCAAGCCGGGGCG CTGA
Upstream 100 bases:
>100_bases ACAAGGCGCTCAAGTGAGCGCGGGACGGCTCCACCCCGTCCGGTAGCTCCGTCCTTTTTCCTGCTGCGATCCCCACCGCG CCGAACCACGCCGCCGCGCC
Downstream 100 bases:
>100_bases GCCGCCGCCGGCCGCGCTAAGGACGGGCGGACGGGGCCTCCACGCCGGCGGCCACCTTCTGCCGCACGATCTGGACGTGG TGCCGCAGCGCGTAGAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 747; Mature: 746
Protein sequence:
>747_residues MPAIAPTARLAFRACVVAAIRDGEAMMEALVAQTRDALEAEVPLAREPRRRDALEGARALLAQHAPALVRGFPMALLEIF AGADPDARARPSEPAGLDFGELSLMDEAEVMAQVELSRAQQVALHATEAMLAELDALVSAAQGLPSVQPDRNPLRPGNYI RALQQVVGAAGVSSDVRTLWMAPLRNALGTQLQAAYRSAAARLREDGVQPVGYAVAGHAAGRGAAGRWQGPVTGWSGMAG TPLPPSQPAVLAPDAEEALLTVAMLRQMLAQPMGLAAPVAAFPGGGLAAAAAEAMEDIAELERIVGRLSGSLPAPLAADA PAAAHPDMAAAAIAQPAAGPADAPARPRSRTASEVVSRMMDNIAQDDRLLPPVQRSLQNLRPALQRLVRHDPRFFTDDRH PARRLLDALTQRALSFDSEDVQDFSGFARLMERAVDSVTSGDTRSADTFAAALAGLEAGWSEQDRRRREREESARAVAQE LTRREALSRRVSQDIRALARTEDVPPDIVEFAAGPWADVVARAQADRPGEDDPGGYLAVVPELFWLAQPALAARTPERLA PAVTRILGVLRGGLDSVGHDEGMTAAILERVAALHQAAAEQAAARAGEATDSGMPQTGHSLLEPEESEESEESEKVEEAE EAEEAEEAGEDRAGDAATPTDGANASGGELSIGTWVELATHHRAVHTQLTWASPHHTLFLFTAPDGSTQSMTRRVRDKLM ADGALKVLPGPPAKIRSPRGVSRKPGR
Sequences:
>Translated_747_residues MPAIAPTARLAFRACVVAAIRDGEAMMEALVAQTRDALEAEVPLAREPRRRDALEGARALLAQHAPALVRGFPMALLEIF AGADPDARARPSEPAGLDFGELSLMDEAEVMAQVELSRAQQVALHATEAMLAELDALVSAAQGLPSVQPDRNPLRPGNYI RALQQVVGAAGVSSDVRTLWMAPLRNALGTQLQAAYRSAAARLREDGVQPVGYAVAGHAAGRGAAGRWQGPVTGWSGMAG TPLPPSQPAVLAPDAEEALLTVAMLRQMLAQPMGLAAPVAAFPGGGLAAAAAEAMEDIAELERIVGRLSGSLPAPLAADA PAAAHPDMAAAAIAQPAAGPADAPARPRSRTASEVVSRMMDNIAQDDRLLPPVQRSLQNLRPALQRLVRHDPRFFTDDRH PARRLLDALTQRALSFDSEDVQDFSGFARLMERAVDSVTSGDTRSADTFAAALAGLEAGWSEQDRRRREREESARAVAQE LTRREALSRRVSQDIRALARTEDVPPDIVEFAAGPWADVVARAQADRPGEDDPGGYLAVVPELFWLAQPALAARTPERLA PAVTRILGVLRGGLDSVGHDEGMTAAILERVAALHQAAAEQAAARAGEATDSGMPQTGHSLLEPEESEESEESEKVEEAE EAEEAEEAGEDRAGDAATPTDGANASGGELSIGTWVELATHHRAVHTQLTWASPHHTLFLFTAPDGSTQSMTRRVRDKLM ADGALKVLPGPPAKIRSPRGVSRKPGR >Mature_746_residues PAIAPTARLAFRACVVAAIRDGEAMMEALVAQTRDALEAEVPLAREPRRRDALEGARALLAQHAPALVRGFPMALLEIFA GADPDARARPSEPAGLDFGELSLMDEAEVMAQVELSRAQQVALHATEAMLAELDALVSAAQGLPSVQPDRNPLRPGNYIR ALQQVVGAAGVSSDVRTLWMAPLRNALGTQLQAAYRSAAARLREDGVQPVGYAVAGHAAGRGAAGRWQGPVTGWSGMAGT PLPPSQPAVLAPDAEEALLTVAMLRQMLAQPMGLAAPVAAFPGGGLAAAAAEAMEDIAELERIVGRLSGSLPAPLAADAP AAAHPDMAAAAIAQPAAGPADAPARPRSRTASEVVSRMMDNIAQDDRLLPPVQRSLQNLRPALQRLVRHDPRFFTDDRHP ARRLLDALTQRALSFDSEDVQDFSGFARLMERAVDSVTSGDTRSADTFAAALAGLEAGWSEQDRRRREREESARAVAQEL TRREALSRRVSQDIRALARTEDVPPDIVEFAAGPWADVVARAQADRPGEDDPGGYLAVVPELFWLAQPALAARTPERLAP AVTRILGVLRGGLDSVGHDEGMTAAILERVAALHQAAAEQAAARAGEATDSGMPQTGHSLLEPEESEESEESEKVEEAEE AEEAEEAGEDRAGDAATPTDGANASGGELSIGTWVELATHHRAVHTQLTWASPHHTLFLFTAPDGSTQSMTRRVRDKLMA DGALKVLPGPPAKIRSPRGVSRKPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79031; Mature: 78899
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIAPTARLAFRACVVAAIRDGEAMMEALVAQTRDALEAEVPLAREPRRRDALEGARAL CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LAQHAPALVRGFPMALLEIFAGADPDARARPSEPAGLDFGELSLMDEAEVMAQVELSRAQ HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVALHATEAMLAELDALVSAAQGLPSVQPDRNPLRPGNYIRALQQVVGAAGVSSDVRTLW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH MAPLRNALGTQLQAAYRSAAARLREDGVQPVGYAVAGHAAGRGAAGRWQGPVTGWSGMAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TPLPPSQPAVLAPDAEEALLTVAMLRQMLAQPMGLAAPVAAFPGGGLAAAAAEAMEDIAE CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH LERIVGRLSGSLPAPLAADAPAAAHPDMAAAAIAQPAAGPADAPARPRSRTASEVVSRMM HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH DNIAQDDRLLPPVQRSLQNLRPALQRLVRHDPRFFTDDRHPARRLLDALTQRALSFDSED HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH VQDFSGFARLMERAVDSVTSGDTRSADTFAAALAGLEAGWSEQDRRRREREESARAVAQE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LTRREALSRRVSQDIRALARTEDVPPDIVEFAAGPWADVVARAQADRPGEDDPGGYLAVV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEHHH PELFWLAQPALAARTPERLAPAVTRILGVLRGGLDSVGHDEGMTAAILERVAALHQAAAE HHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHH QAAARAGEATDSGMPQTGHSLLEPEESEESEESEKVEEAEEAEEAEEAGEDRAGDAATPT HHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DGANASGGELSIGTWVELATHHRAVHTQLTWASPHHTLFLFTAPDGSTQSMTRRVRDKLM CCCCCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHH ADGALKVLPGPPAKIRSPRGVSRKPGR HCCCEEECCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure PAIAPTARLAFRACVVAAIRDGEAMMEALVAQTRDALEAEVPLAREPRRRDALEGARAL CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LAQHAPALVRGFPMALLEIFAGADPDARARPSEPAGLDFGELSLMDEAEVMAQVELSRAQ HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVALHATEAMLAELDALVSAAQGLPSVQPDRNPLRPGNYIRALQQVVGAAGVSSDVRTLW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH MAPLRNALGTQLQAAYRSAAARLREDGVQPVGYAVAGHAAGRGAAGRWQGPVTGWSGMAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TPLPPSQPAVLAPDAEEALLTVAMLRQMLAQPMGLAAPVAAFPGGGLAAAAAEAMEDIAE CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH LERIVGRLSGSLPAPLAADAPAAAHPDMAAAAIAQPAAGPADAPARPRSRTASEVVSRMM HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH DNIAQDDRLLPPVQRSLQNLRPALQRLVRHDPRFFTDDRHPARRLLDALTQRALSFDSED HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH VQDFSGFARLMERAVDSVTSGDTRSADTFAAALAGLEAGWSEQDRRRREREESARAVAQE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LTRREALSRRVSQDIRALARTEDVPPDIVEFAAGPWADVVARAQADRPGEDDPGGYLAVV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEHHH PELFWLAQPALAARTPERLAPAVTRILGVLRGGLDSVGHDEGMTAAILERVAALHQAAAE HHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHH QAAARAGEATDSGMPQTGHSLLEPEESEESEESEKVEEAEEAEEAEEAGEDRAGDAATPT HHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DGANASGGELSIGTWVELATHHRAVHTQLTWASPHHTLFLFTAPDGSTQSMTRRVRDKLM CCCCCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHH ADGALKVLPGPPAKIRSPRGVSRKPGR HCCCEEECCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA