| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610324
Identifier: 120610324
GI number: 120610324
Start: 1799556
End: 1800113
Strand: Direct
Name: 120610324
Synonym: Aave_1641
Alternate gene names: NA
Gene position: 1799556-1800113 (Clockwise)
Preceding gene: 120610323
Following gene: 120610328
Centisome position: 33.62
GC content: 66.67
Gene sequence:
>558_bases ATGACCGACCACGAGCAAAACACGATCGACGACACGATGCGCATCTTGGGGCAGATCACCCGGATCGTCTTCAAAAGTGA GCGGCTACCGCCCAACATTCTCATGGCGCTGCTGAGCAAACCCTCGCTGGGCATGGGCCTGCTCATGAAGTCGTCCGAGG CCATTCGCGCCCTCGATCCCAATCACAAGTACCACGACGCCCGCATCGCCCGGCTCGTGGCCAAGCTGCCGGCGGAGTTG CCGTCCGGTCCGATCGGGGTGGAGGCGCAAGGGCCTTTCTGGCTCGGGTACTACCAGACCCCCGATTGGCCGGTGAAACG GGACGTGCAGGGCCTGCGAGAGGCCGGCGAGGCGCTGTTTGGCGGCACCTGGCAGACGGCCCTTGCTGAAGCGCTGGGGT TGTCGGACGCACGCCGCGTGCGGGAGTGGCTCGCTGGTACACGGCGCATCCCTCCGGGGATATGGGACGACATCAAGCGC CTGCTCGAAGAGCGCTCGGCACGGGCCCAGGCGATGGCCGGCGGCCTCGACGATGCTGGCGCCCCTCAAGGGGGATAG
Upstream 100 bases:
>100_bases TGGGCGACGTGTGGCGCGCGATGAGCGCGGCATACGCTGAGATGGGGTCGGCCGCCCAGGCGATAGATGCCGCGCAATCG AGTGCGGCGCTGGAAAAACT
Downstream 100 bases:
>100_bases CCGCGGCTCGAAGCGAGACGGCGCCTTACATTTCCGGGCGGTCGGGATGGGGGTAGAAAACCGCCCGAATGTGATCTCCC GCGTTTGCGTCGAGGTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTDHEQNTIDDTMRILGQITRIVFKSERLPPNILMALLSKPSLGMGLLMKSSEAIRALDPNHKYHDARIARLVAKLPAEL PSGPIGVEAQGPFWLGYYQTPDWPVKRDVQGLREAGEALFGGTWQTALAEALGLSDARRVREWLAGTRRIPPGIWDDIKR LLEERSARAQAMAGGLDDAGAPQGG
Sequences:
>Translated_185_residues MTDHEQNTIDDTMRILGQITRIVFKSERLPPNILMALLSKPSLGMGLLMKSSEAIRALDPNHKYHDARIARLVAKLPAEL PSGPIGVEAQGPFWLGYYQTPDWPVKRDVQGLREAGEALFGGTWQTALAEALGLSDARRVREWLAGTRRIPPGIWDDIKR LLEERSARAQAMAGGLDDAGAPQGG >Mature_184_residues TDHEQNTIDDTMRILGQITRIVFKSERLPPNILMALLSKPSLGMGLLMKSSEAIRALDPNHKYHDARIARLVAKLPAELP SGPIGVEAQGPFWLGYYQTPDWPVKRDVQGLREAGEALFGGTWQTALAEALGLSDARRVREWLAGTRRIPPGIWDDIKRL LEERSARAQAMAGGLDDAGAPQGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20318; Mature: 20186
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHEQNTIDDTMRILGQITRIVFKSERLPPNILMALLSKPSLGMGLLMKSSEAIRALDP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCHHHHHCCC NHKYHDARIARLVAKLPAELPSGPIGVEAQGPFWLGYYQTPDWPVKRDVQGLREAGEALF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH GGTWQTALAEALGLSDARRVREWLAGTRRIPPGIWDDIKRLLEERSARAQAMAGGLDDAG CCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC APQGG CCCCC >Mature Secondary Structure TDHEQNTIDDTMRILGQITRIVFKSERLPPNILMALLSKPSLGMGLLMKSSEAIRALDP CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCHHHHHCCC NHKYHDARIARLVAKLPAELPSGPIGVEAQGPFWLGYYQTPDWPVKRDVQGLREAGEALF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH GGTWQTALAEALGLSDARRVREWLAGTRRIPPGIWDDIKRLLEERSARAQAMAGGLDDAG CCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC APQGG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA