| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is dam [C]
Identifier: 120610321
GI number: 120610321
Start: 1798144
End: 1798938
Strand: Direct
Name: dam [C]
Synonym: Aave_1638
Alternate gene names: 120610321
Gene position: 1798144-1798938 (Clockwise)
Preceding gene: 120610320
Following gene: 120610322
Centisome position: 33.59
GC content: 62.26
Gene sequence:
>795_bases ATGGCAATGCCAATCATCCCCTGGCTTGGCGGCAAACGACGCCTGGCTGACATCATCATCCCGCGCTTTCCCGCGCACAC CTGTTACGTGGAGGTTTTCGCCGGCGGCGCCGCGTTGTATTTCATGCGTCCGCCGGCGCAGGTGGAAGTCATCAACGACA TCAACGGCGAGCTGGTCAACCTCTATCGCGTGGTCCAGCGGCACCTCGAGGAGTTTGTCCGCCAATTCAAGTGGGCGCTG AGCAGTCGCGAGGTTTTTAGGTGGATGCAGATCACCGAGCCAGAGACGCTCACCGACATCGAGCGCGCGGCGCGGTTTTA CTACTTGCAGAACCAGGCGTTTGGAGGCCGGGTGGAGGGCCAGACCTGGGGGACAGCGACGACAGCACCCGCACCCACCG TCAACTTGCTTCGACTCGAGGAGACCCTCAGCGCGGCACATCTGCGGCTTCATGGTGCCTACATCGAGCGGCTGGACTGG CAGGCGTGCGTCAGGCGCTATGACCGCTCGCACACCCTGTTTTACCTGGACCCTCCGTACTGGCAAACGGAGGGGTATGG TGTGCCGTTCGCGTGGGCCGAATACGAGAGCATGGCGGTTGCGATGCGCTCGATAAAGGGGAAGGCTGTCCTGAGCATCA ACGACCATCCCGACATCCGCAAGTGCTTCGCCGGCCTGCAGATGGAGGAGGTGCCGATCACTTACCAGGTGGGAGGTGGT GGCAAGGGCGTGGACCGCACAGAACTCGTGATCTACAGCTGGGATCGGGACGCCGAGCACCCGGGCCTTTTCTGA
Upstream 100 bases:
>100_bases CCTGACGGCCACCAGACACACAGAACCAGCCTGTGAGCCCAGCCAAGGCCCCGCCCACCTGTACAGGCGGGGGCGAGTGT ATCAACCCCTGGAGCCCACT
Downstream 100 bases:
>100_bases CGCGCAGCGATCGCCTGGCGAAAAGTGCTTGACGCTCTTTGGTGTGCGCCTAAAATTAGGCGCATGGGCAAGGCAATCGG GCCGGCCTAAATGCCAGAAA
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: DNA Adenine Methylase; Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA-Methyltransferase; Site-Specific DNA Methylase; N6 Adenine-Specific DNA Methyltransferase; Methylase; Methylase LlaDCHIA; Adenine-Specific DNA-Methyltransferase; DNA Adenine Methyltransferase; Adenine Specific DNA Methyltransferase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage DNA Adenine Methylase; Type II DNA Methyltransferase; Prophage; DNA Adenine Methylase Subfamily; Phage Associated Type II DNA-Methyltransferase; Ype IIs Methyltransferase M.AlwI; Phage-Related Methylase; Prophage DNA Adenine Methylase; Adenine-Specific Methyltransferase; Phage Methylase; DNA Methyltransferase; DNA Methylase; Phage_related Methylase; Prophage DNA Methylase; Type IIs Methyltransferase; LOW QUALITY PROTEIN DNA Adenine Methylase; Phage DNA Methyltransferase; Dam Methylase; Site-Specific DNA Methylase Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAMPIIPWLGGKRRLADIIIPRFPAHTCYVEVFAGGAALYFMRPPAQVEVINDINGELVNLYRVVQRHLEEFVRQFKWAL SSREVFRWMQITEPETLTDIERAARFYYLQNQAFGGRVEGQTWGTATTAPAPTVNLLRLEETLSAAHLRLHGAYIERLDW QACVRRYDRSHTLFYLDPPYWQTEGYGVPFAWAEYESMAVAMRSIKGKAVLSINDHPDIRKCFAGLQMEEVPITYQVGGG GKGVDRTELVIYSWDRDAEHPGLF
Sequences:
>Translated_264_residues MAMPIIPWLGGKRRLADIIIPRFPAHTCYVEVFAGGAALYFMRPPAQVEVINDINGELVNLYRVVQRHLEEFVRQFKWAL SSREVFRWMQITEPETLTDIERAARFYYLQNQAFGGRVEGQTWGTATTAPAPTVNLLRLEETLSAAHLRLHGAYIERLDW QACVRRYDRSHTLFYLDPPYWQTEGYGVPFAWAEYESMAVAMRSIKGKAVLSINDHPDIRKCFAGLQMEEVPITYQVGGG GKGVDRTELVIYSWDRDAEHPGLF >Mature_263_residues AMPIIPWLGGKRRLADIIIPRFPAHTCYVEVFAGGAALYFMRPPAQVEVINDINGELVNLYRVVQRHLEEFVRQFKWALS SREVFRWMQITEPETLTDIERAARFYYLQNQAFGGRVEGQTWGTATTAPAPTVNLLRLEETLSAAHLRLHGAYIERLDWQ ACVRRYDRSHTLFYLDPPYWQTEGYGVPFAWAEYESMAVAMRSIKGKAVLSINDHPDIRKCFAGLQMEEVPITYQVGGGG KGVDRTELVIYSWDRDAEHPGLF
Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 30288; Mature: 30157
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPIIPWLGGKRRLADIIIPRFPAHTCYVEVFAGGAALYFMRPPAQVEVINDINGELVN CCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCEEEEEECCCCEEEEECCCCHHHHH LYRVVQRHLEEFVRQFKWALSSREVFRWMQITEPETLTDIERAARFYYLQNQAFGGRVEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCEECC QTWGTATTAPAPTVNLLRLEETLSAAHLRLHGAYIERLDWQACVRRYDRSHTLFYLDPPY CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCC WQTEGYGVPFAWAEYESMAVAMRSIKGKAVLSINDHPDIRKCFAGLQMEEVPITYQVGGG CCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCEEECCCEEEEECCC GKGVDRTELVIYSWDRDAEHPGLF CCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure AMPIIPWLGGKRRLADIIIPRFPAHTCYVEVFAGGAALYFMRPPAQVEVINDINGELVN CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCEEEEEECCCCEEEEECCCCHHHHH LYRVVQRHLEEFVRQFKWALSSREVFRWMQITEPETLTDIERAARFYYLQNQAFGGRVEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCEECC QTWGTATTAPAPTVNLLRLEETLSAAHLRLHGAYIERLDWQACVRRYDRSHTLFYLDPPY CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCC WQTEGYGVPFAWAEYESMAVAMRSIKGKAVLSINDHPDIRKCFAGLQMEEVPITYQVGGG CCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCEEECCCEEEEECCC GKGVDRTELVIYSWDRDAEHPGLF CCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA