| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610315
Identifier: 120610315
GI number: 120610315
Start: 1795239
End: 1795868
Strand: Direct
Name: 120610315
Synonym: Aave_1632
Alternate gene names: NA
Gene position: 1795239-1795868 (Clockwise)
Preceding gene: 120610314
Following gene: 120610316
Centisome position: 33.54
GC content: 70.48
Gene sequence:
>630_bases ATGTATTTGCACATCGAGACGGGGGCGTATCCGCTGACCGAGCAAGACGTGATCGCGCGACACCCGGAGTGCTCTTTCCC GGTGCCGTTCTCGGCGCCCGACGGGTATCTGCTCGTCGAGGCCACCGCCCAGCCCGCCCATGACGCGGCGGCGGAGCGCA CGGTGGAGCTGCCACCGCTGGAGGTGGGTGGCGTGTGGCGGCAGACCTGGGCGGTGGTGCCGCTCACGGCCGAAGAAATC GAAGCGCGAGAGCGAGAAGCAGCCCGCGACGTGCAGCGCGCACGCGGCATGAAGATCGCGGCGATCAACTCCGAATACGA GCGGCGCACCGCGGCGATCTCGGCCAGCTATCCGAGCGCCGAGCGAGAGAGCTGGCCGGTGCAGACCCGAGAGGCCCGAG CCCTGCAGGCAGATGACGCGGCGGCAACCCCGTGGATCGATGCTGCTGCCGCGGCGCGCGGCCTGGACCGCGCCGAGCTG GCGCGAAGGATCGTGGCGCTGGACATGGCCTACCGATCCGTGCACGGCGCGCTGTCGGGCACGCGCCAACGGCTGGAGGA ACTGGCCTGGACCGCCGCAGACATCGAGCAGATCAAGGCGATCGACGAGGCCGCCGGCTGGCCGACCTGA
Upstream 100 bases:
>100_bases TATTTGTCCCGTCCGGGTCAGTGCTGCGCCAGGGTGCTGGCGCCGTGCGAATCATGTGGGGCGGAGGCCGCTCCTATCCC AACAACGCAGGAGACATGTG
Downstream 100 bases:
>100_bases CTTCGTTGCACCACCCCACCACAGCCCGCCGCGTGCGGGCTTTTTTGCGTCCAAAGGATCTTCATGACCACCATTCCACG CGGCCTCCGCAACAACAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MYLHIETGAYPLTEQDVIARHPECSFPVPFSAPDGYLLVEATAQPAHDAAAERTVELPPLEVGGVWRQTWAVVPLTAEEI EAREREAARDVQRARGMKIAAINSEYERRTAAISASYPSAERESWPVQTREARALQADDAAATPWIDAAAAARGLDRAEL ARRIVALDMAYRSVHGALSGTRQRLEELAWTAADIEQIKAIDEAAGWPT
Sequences:
>Translated_209_residues MYLHIETGAYPLTEQDVIARHPECSFPVPFSAPDGYLLVEATAQPAHDAAAERTVELPPLEVGGVWRQTWAVVPLTAEEI EAREREAARDVQRARGMKIAAINSEYERRTAAISASYPSAERESWPVQTREARALQADDAAATPWIDAAAAARGLDRAEL ARRIVALDMAYRSVHGALSGTRQRLEELAWTAADIEQIKAIDEAAGWPT >Mature_209_residues MYLHIETGAYPLTEQDVIARHPECSFPVPFSAPDGYLLVEATAQPAHDAAAERTVELPPLEVGGVWRQTWAVVPLTAEEI EAREREAARDVQRARGMKIAAINSEYERRTAAISASYPSAERESWPVQTREARALQADDAAATPWIDAAAAARGLDRAEL ARRIVALDMAYRSVHGALSGTRQRLEELAWTAADIEQIKAIDEAAGWPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22928; Mature: 22928
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLHIETGAYPLTEQDVIARHPECSFPVPFSAPDGYLLVEATAQPAHDAAAERTVELPPL CEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCC EVGGVWRQTWAVVPLTAEEIEAREREAARDVQRARGMKIAAINSEYERRTAAISASYPSA CCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHEEECCCCCC ERESWPVQTREARALQADDAAATPWIDAAAAARGLDRAELARRIVALDMAYRSVHGALSG CCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TRQRLEELAWTAADIEQIKAIDEAAGWPT HHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYLHIETGAYPLTEQDVIARHPECSFPVPFSAPDGYLLVEATAQPAHDAAAERTVELPPL CEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCC EVGGVWRQTWAVVPLTAEEIEAREREAARDVQRARGMKIAAINSEYERRTAAISASYPSA CCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHEEECCCCCC ERESWPVQTREARALQADDAAATPWIDAAAAARGLDRAELARRIVALDMAYRSVHGALSG CCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TRQRLEELAWTAADIEQIKAIDEAAGWPT HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA