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The map label for this gene is 120610297

Identifier: 120610297

GI number: 120610297

Start: 1776534

End: 1776926

Strand: Direct

Name: 120610297

Synonym: Aave_1614

Alternate gene names: NA

Gene position: 1776534-1776926 (Clockwise)

Preceding gene: 120610296

Following gene: 120610298

Centisome position: 33.19

GC content: 68.96

Gene sequence:

>393_bases
ATGACCGCGAGCCGCACCGCTGACCGAAAGCAGTACGACAGCCGCAGAGGATCAGCCAGCGAGCGAGGCTACGGCTATGC
CTGGCAGAAGGCGCGCGAGGGATTCCTGCGCGAGCACCCGCTGTGTGCTGAGCACGCTGCCCGCGGCCGCGACGTTGCCG
CCCAGGTGGTTGATCACATCACGCCGCCCAGGCTGAAAGAGGCGCGCGACAGCGGCGACGCTGAGCGACTGTCGGCCGCG
TATCAGCTCTTTTGGAGCCGCAAGAACTGGCAGCCGCTCTGCAAGCCCTGCCACGACTCGATCAAGCAGCGGCTGGAAAA
GTCGGGCCGCACGCCGGGGTGCGACGCCGACGGCCGCCCCCTCGACCCCGGCCACCATTGGCATCGGGGGTAG

Upstream 100 bases:

>100_bases
TGTCCCACCCACACCGGCGGGTCGAACCCCGGCATGCATCCCGCGTGTCGGGGTTTCGTTTTTCTGGACGGTGCATGGCA
CTGCCATTGATCGGAGGCCT

Downstream 100 bases:

>100_bases
GGGGGGCAAAAACTTGGGGCCTTTGTGCCTGCAGACCGACCGGTTCTCCTCGCTCGCAACGCCGGGAAATATGAGGGGTG
GGGGGTATCGAAAGGAGATC

Product: HNH endonuclease

Products: NA

Alternate protein names: Phage Protein; Prophage LambdaSo Holin; Restriction Endonuclease; HNH Nuclease Family Protein; Phage Endonuclease; Phage Holin

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTASRTADRKQYDSRRGSASERGYGYAWQKAREGFLREHPLCAEHAARGRDVAAQVVDHITPPRLKEARDSGDAERLSAA
YQLFWSRKNWQPLCKPCHDSIKQRLEKSGRTPGCDADGRPLDPGHHWHRG

Sequences:

>Translated_130_residues
MTASRTADRKQYDSRRGSASERGYGYAWQKAREGFLREHPLCAEHAARGRDVAAQVVDHITPPRLKEARDSGDAERLSAA
YQLFWSRKNWQPLCKPCHDSIKQRLEKSGRTPGCDADGRPLDPGHHWHRG
>Mature_129_residues
TASRTADRKQYDSRRGSASERGYGYAWQKAREGFLREHPLCAEHAARGRDVAAQVVDHITPPRLKEARDSGDAERLSAAY
QLFWSRKNWQPLCKPCHDSIKQRLEKSGRTPGCDADGRPLDPGHHWHRG

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14792; Mature: 14660

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASRTADRKQYDSRRGSASERGYGYAWQKAREGFLREHPLCAEHAARGRDVAAQVVDHI
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHC
TPPRLKEARDSGDAERLSAAYQLFWSRKNWQPLCKPCHDSIKQRLEKSGRTPGCDADGRP
CCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LDPGHHWHRG
CCCCCCCCCC
>Mature Secondary Structure 
TASRTADRKQYDSRRGSASERGYGYAWQKAREGFLREHPLCAEHAARGRDVAAQVVDHI
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHC
TPPRLKEARDSGDAERLSAAYQLFWSRKNWQPLCKPCHDSIKQRLEKSGRTPGCDADGRP
CCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LDPGHHWHRG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA