| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610296
Identifier: 120610296
GI number: 120610296
Start: 1775854
End: 1776396
Strand: Direct
Name: 120610296
Synonym: Aave_1613
Alternate gene names: NA
Gene position: 1775854-1776396 (Clockwise)
Preceding gene: 120610295
Following gene: 120610297
Centisome position: 33.18
GC content: 67.59
Gene sequence:
>543_bases ATGTCGCCGGTACCCCGTTCGGGGCCGAGGACCCGCGCATGCAGGACCTGGCGGCAGCGCTCGTCTGGTTCGGCGGTGCA CACGTGTGCATCTGGCCTGCGGAGAAGGAGGGAGGCGTGCATGGCCCGGATTAAGTGGGTGCAGCAGCGCCTGGAGAACT GGGGCATGTGGGCCTCGCGCGGCGGGCACGGCAGCGGCGGCTATTCGTCGCAGTCCGTGCTGGCTGGCTGGGTGGAGGCT GATGCTTGGGCACGCAACCGCTGCGGTGGCTCGGTCATTCCGGTGAGCGAAGCCGAGGCGTTGGAAACGGATCGCGCTAT CGCTTCGTTCAAGGACACTAGGCCAGCGATCGCCAAGGCGCTGATCCTGGTGTATGTCTATGACTTCGGCGTGGTGGAGG CTGCCTACCGCGAGAAGGTCGCGCAGTCCACGATGCACGCGCGCCTCGGCCAGGCAGACCATGCCATCGCGATGTGGCTC GAGGACCGGGCGGAAGAGCTCGCCAAGCGGCGCGCGGCAGCGCGGGGGAGTTTTACACCCTAG
Upstream 100 bases:
>100_bases ATCAAAGCCCGGGCCGAGCAGATCGGCCCAGAGGCATACGCCCTGGTGCGCCGGGGTCTGCGTGGCGAGCCTGGTTGCTT CTATGCCTTGGAGGCTGGCC
Downstream 100 bases:
>100_bases AGCTTTTGAGTACATTTCAGGCACCTTGTCATAGGTGTGTCCCACCCACACCGGCGGGTCGAACCCCGGCATGCATCCCG CGTGTCGGGGTTTCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSPVPRSGPRTRACRTWRQRSSGSAVHTCASGLRRRREACMARIKWVQQRLENWGMWASRGGHGSGGYSSQSVLAGWVEA DAWARNRCGGSVIPVSEAEALETDRAIASFKDTRPAIAKALILVYVYDFGVVEAAYREKVAQSTMHARLGQADHAIAMWL EDRAEELAKRRAAARGSFTP
Sequences:
>Translated_180_residues MSPVPRSGPRTRACRTWRQRSSGSAVHTCASGLRRRREACMARIKWVQQRLENWGMWASRGGHGSGGYSSQSVLAGWVEA DAWARNRCGGSVIPVSEAEALETDRAIASFKDTRPAIAKALILVYVYDFGVVEAAYREKVAQSTMHARLGQADHAIAMWL EDRAEELAKRRAAARGSFTP >Mature_179_residues SPVPRSGPRTRACRTWRQRSSGSAVHTCASGLRRRREACMARIKWVQQRLENWGMWASRGGHGSGGYSSQSVLAGWVEAD AWARNRCGGSVIPVSEAEALETDRAIASFKDTRPAIAKALILVYVYDFGVVEAAYREKVAQSTMHARLGQADHAIAMWLE DRAEELAKRRAAARGSFTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19862; Mature: 19730
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVPRSGPRTRACRTWRQRSSGSAVHTCASGLRRRREACMARIKWVQQRLENWGMWASR CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGHGSGGYSSQSVLAGWVEADAWARNRCGGSVIPVSEAEALETDRAIASFKDTRPAIAKA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LILVYVYDFGVVEAAYREKVAQSTMHARLGQADHAIAMWLEDRAEELAKRRAAARGSFTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SPVPRSGPRTRACRTWRQRSSGSAVHTCASGLRRRREACMARIKWVQQRLENWGMWASR CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGHGSGGYSSQSVLAGWVEADAWARNRCGGSVIPVSEAEALETDRAIASFKDTRPAIAKA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LILVYVYDFGVVEAAYREKVAQSTMHARLGQADHAIAMWLEDRAEELAKRRAAARGSFTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA