| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610235
Identifier: 120610235
GI number: 120610235
Start: 1716978
End: 1717364
Strand: Direct
Name: 120610235
Synonym: Aave_1550
Alternate gene names: NA
Gene position: 1716978-1717364 (Clockwise)
Preceding gene: 120610234
Following gene: 120610236
Centisome position: 32.08
GC content: 73.13
Gene sequence:
>387_bases ATGCACGCGGCTGACGTCTATGACTACGCCATCGTGCGCGTGGTGCCGCGCGTGGAGCGCGAGGAATTCATCAACGCCGG CGTGATCCTCTCGTGCCAGCGTTCCGGCTTCCTGCAGGCCGCGACCGCGCTCGACGAGGCGCGCCTGCTCGCGCTCGACC CGCAGGCCGACCTGGACACGGTGCGGCGCCACCTGGGCGCCATCGTGGCCATCTGCGCCGGCGACCCGGGCTGCGGTCCG ATCGCGGCGCTGCCCTACCGGGCGCGCTTCCACTGGCTCACCGCGCGGCGCAGCGCCATCATCCAGACCTCGCCCGTGCA CACCGGGCGCTGCACGGACGCCGCGGCGGCGCTGGAGCACATCATGGACCGCATGGTCCGGCGCTGA
Upstream 100 bases:
>100_bases GATGGTCCGCTCGCCGATCCGGCGGCGCACCGGCAGGCCTACGTCGATTATTTCCTGGCGCGGCTCGCGGGCCGGCAAGC CTGGCTGCAGGGGGCGATCG
Downstream 100 bases:
>100_bases AGAGCCTGGCGCCCTTGCCCTGCACGGGCGCGCTGCCGGGCCCGCTGGCGGGCTGGCGGCAGGCGCCGGCGGGATGCCCT CCGACAGGCATACGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MHAADVYDYAIVRVVPRVEREEFINAGVILSCQRSGFLQAATALDEARLLALDPQADLDTVRRHLGAIVAICAGDPGCGP IAALPYRARFHWLTARRSAIIQTSPVHTGRCTDAAAALEHIMDRMVRR
Sequences:
>Translated_128_residues MHAADVYDYAIVRVVPRVEREEFINAGVILSCQRSGFLQAATALDEARLLALDPQADLDTVRRHLGAIVAICAGDPGCGP IAALPYRARFHWLTARRSAIIQTSPVHTGRCTDAAAALEHIMDRMVRR >Mature_128_residues MHAADVYDYAIVRVVPRVEREEFINAGVILSCQRSGFLQAATALDEARLLALDPQADLDTVRRHLGAIVAICAGDPGCGP IAALPYRARFHWLTARRSAIIQTSPVHTGRCTDAAAALEHIMDRMVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14033; Mature: 14033
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAADVYDYAIVRVVPRVEREEFINAGVILSCQRSGFLQAATALDEARLLALDPQADLDT CCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCHHH VRRHLGAIVAICAGDPGCGPIAALPYRARFHWLTARRSAIIQTSPVHTGRCTDAAAALEH HHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHH IMDRMVRR HHHHHHCC >Mature Secondary Structure MHAADVYDYAIVRVVPRVEREEFINAGVILSCQRSGFLQAATALDEARLLALDPQADLDT CCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCHHH VRRHLGAIVAICAGDPGCGPIAALPYRARFHWLTARRSAIIQTSPVHTGRCTDAAAALEH HHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHH IMDRMVRR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA